RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 PRG4Q92954 1404 aaPredicted RBP18.91■□□□□ 0.62
PVT1-208ENST00000519481 IGF1RP08069 1367 aa18.86■□□□□ 0.61
PVT1-208ENST00000519481 RUSC2Q8N2Y8 1516 aa18.84■□□□□ 0.61
PVT1-208ENST00000519481 CUL7Q14999 1698 aa18.82■□□□□ 0.6
PVT1-208ENST00000519481 NPM1P06748 294 aaKnown RBP eCLIP18.81■□□□□ 0.6
PVT1-208ENST00000519481 KIAA0586Q9BVV6 1533 aa18.8■□□□□ 0.6
PVT1-208ENST00000519481 CARMIL1Q5VZK9 1371 aa18.77■□□□□ 0.6
PVT1-208ENST00000519481 CARMIL2Q6F5E8 1435 aa18.67■□□□□ 0.58
PVT1-208ENST00000519481 FAM69CQ0P6D2 419 aa18.66■□□□□ 0.58
PVT1-208ENST00000519481 PTPRGP23470 1445 aa18.66■□□□□ 0.58
PVT1-208ENST00000519481 MAPKBP1O60336 1514 aa18.64■□□□□ 0.57
PVT1-208ENST00000519481 ADCY10Q96PN6 1610 aa18.63■□□□□ 0.57
PVT1-208ENST00000519481 KIF13AQ9H1H9 1805 aa18.63■□□□□ 0.57
PVT1-208ENST00000519481 TTBK1Q5TCY1 1321 aaPredicted RBP18.63■□□□□ 0.57
PVT1-208ENST00000519481 ABCC10Q5T3U5 1492 aa18.63■□□□□ 0.57
PVT1-208ENST00000519481 TNIKQ9UKE5 1360 aa18.62■□□□□ 0.57
PVT1-208ENST00000519481 IQGAP2Q13576 1575 aa18.61■□□□□ 0.57
PVT1-208ENST00000519481 RAPGEF2Q9Y4G8 1499 aa18.59■□□□□ 0.57
PVT1-208ENST00000519481 DIP2BQ9P265 1576 aa18.55■□□□□ 0.56
PVT1-208ENST00000519481 ABCC2Q92887 1545 aa18.51■□□□□ 0.55
PVT1-208ENST00000519481 DISP1Q96F81 1524 aa18.49■□□□□ 0.55
PVT1-208ENST00000519481 UGGT2Q9NYU1 1516 aa18.49■□□□□ 0.55
PVT1-208ENST00000519481 UACAQ9BZF9 1416 aa18.49■□□□□ 0.55
PVT1-208ENST00000519481 UHRF1BP1LA0JNW5 1464 aa18.48■□□□□ 0.55
PVT1-208ENST00000519481 PLB1Q6P1J6 1458 aa18.47■□□□□ 0.55
PVT1-208ENST00000519481 ASXL2Q76L83 1435 aa18.45■□□□□ 0.54
PVT1-208ENST00000519481 TSPOAP1O95153 1857 aa18.43■□□□□ 0.54
PVT1-208ENST00000519481 KDM6BO15054 1643 aa18.41■□□□□ 0.54
PVT1-208ENST00000519481 KIAA0556O60303 1618 aa18.41■□□□□ 0.54
PVT1-208ENST00000519481 GOLGA3Q08378 1498 aa18.4■□□□□ 0.54
PVT1-208ENST00000519481 FAM9AQ8IZU1 332 aaPredicted RBP18.39■□□□□ 0.53
PVT1-208ENST00000519481 KDM5BQ9UGL1 1544 aa18.39■□□□□ 0.53
PVT1-208ENST00000519481 CTTNBP2Q8WZ74 1663 aa18.38■□□□□ 0.53
PVT1-208ENST00000519481 GLI2P10070 1586 aa18.38■□□□□ 0.53
PVT1-208ENST00000519481 PRXQ9BXM0 1461 aa18.37■□□□□ 0.53
PVT1-208ENST00000519481 EPRSP07814 1512 aaKnown RBP18.33■□□□□ 0.52
PVT1-208ENST00000519481 ZCCHC11Q5TAX3 1644 aaKnown RBP18.32■□□□□ 0.52
PVT1-208ENST00000519481 CSRNP3Q8WYN3 585 aa18.31■□□□□ 0.52
PVT1-208ENST00000519481 TEX14Q8IWB6 1497 aa18.29■□□□□ 0.52
PVT1-208ENST00000519481 WDR7Q9Y4E6 1490 aa18.27■□□□□ 0.52
PVT1-208ENST00000519481 PPRC1Q5VV67 1664 aaKnown RBP18.25■□□□□ 0.51
PVT1-208ENST00000519481 ABCA8O94911 1581 aa18.25■□□□□ 0.51
PVT1-208ENST00000519481 EEA1Q15075 1411 aa18.24■□□□□ 0.51
PVT1-208ENST00000519481 MAP3K4Q9Y6R4 1608 aa18.24■□□□□ 0.51
PVT1-208ENST00000519481 P3H3Q8IVL6 736 aa18.23■□□□□ 0.51
PVT1-208ENST00000519481 KCNH8Q96L42 1107 aa18.23■□□□□ 0.51
PVT1-208ENST00000519481 KDM4FA0A1W2PPD8 638 aa18.21■□□□□ 0.51
PVT1-208ENST00000519481 CD109Q6YHK3 1445 aa18.19■□□□□ 0.5
PVT1-208ENST00000519481 COL17A1Q9UMD9 1497 aaPredicted RBP18.16■□□□□ 0.5
PVT1-208ENST00000519481 ARID3CA6NKF2 412 aa18.16■□□□□ 0.5
PVT1-208ENST00000519481 CFAP43Q8NDM7 1665 aa18.15■□□□□ 0.5
PVT1-208ENST00000519481 MAGI3Q5TCQ9 1506 aa18.14■□□□□ 0.49
PVT1-208ENST00000519481 RANGAP1P46060 587 aaPredicted RBP18.13■□□□□ 0.49
PVT1-208ENST00000519481 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.12■□□□□ 0.49
PVT1-208ENST00000519481 HNRNPUL2Q1KMD3 747 aaKnown RBP18.12■□□□□ 0.49
PVT1-208ENST00000519481 ATP10BO94823 1461 aa18.12■□□□□ 0.49
PVT1-208ENST00000519481 SAMD9Q5K651 1589 aa18.12■□□□□ 0.49
PVT1-208ENST00000519481 PHF23Q9BUL5 403 aaPredicted RBP18.11■□□□□ 0.49
PVT1-208ENST00000519481 ADGRL1O94910 1474 aa18.08■□□□□ 0.49
PVT1-208ENST00000519481 RAPGEF6Q8TEU7 1601 aa18.08■□□□□ 0.48
PVT1-208ENST00000519481 SENP3Q9H4L4 574 aaPredicted RBP18.06■□□□□ 0.48
PVT1-208ENST00000519481 FHOD3Q2V2M9 1422 aa18.04■□□□□ 0.48
PVT1-208ENST00000519481 PHLDB1Q86UU1 1377 aa18.04■□□□□ 0.48
PVT1-208ENST00000519481 KIF21BO75037 1637 aa18.02■□□□□ 0.48
PVT1-208ENST00000519481 PLEKHD1A6NEE1 506 aa18.01■□□□□ 0.47
PVT1-208ENST00000519481 EFCAB5A4FU69 1503 aa18■□□□□ 0.47
PVT1-208ENST00000519481 ARAP3Q8WWN8 1544 aa18■□□□□ 0.47
PVT1-208ENST00000519481 UBTFP17480 764 aaKnown RBP18■□□□□ 0.47
PVT1-208ENST00000519481 ABCA9Q8IUA7 1624 aa18■□□□□ 0.47
PVT1-208ENST00000519481 NUP153P49790 1475 aaKnown RBP18■□□□□ 0.47
PVT1-208ENST00000519481 NEO1Q92859 1461 aa17.95■□□□□ 0.46
PVT1-208ENST00000519481 EHMT2Q96KQ7 1210 aa17.95■□□□□ 0.46
PVT1-208ENST00000519481 RAPGEF3O95398 923 aa17.91■□□□□ 0.46
PVT1-208ENST00000519481 ATP1B4Q9UN42 357 aaPredicted RBP17.9■□□□□ 0.46
PVT1-208ENST00000519481 FMN1Q68DA7 1419 aa17.88■□□□□ 0.45
PVT1-208ENST00000519481 CDK11AQ9UQ88 783 aaPredicted RBP17.85■□□□□ 0.45
PVT1-208ENST00000519481 DENND4BO75064 1496 aaPredicted RBP17.84■□□□□ 0.45
PVT1-208ENST00000519481 CFAP74Q9C0B2 1584 aa17.83■□□□□ 0.45
PVT1-208ENST00000519481 FANCAO15360 1455 aa17.83■□□□□ 0.45
PVT1-208ENST00000519481 AKNAQ7Z591 1439 aa17.83■□□□□ 0.45
PVT1-208ENST00000519481 ARID4BQ4LE39 1312 aaPredicted RBP17.83■□□□□ 0.44
PVT1-208ENST00000519481 CDK13Q14004 1512 aaKnown RBP17.82■□□□□ 0.44
PVT1-208ENST00000519481 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.82■□□□□ 0.44
PVT1-208ENST00000519481 ARHGAP35Q9NRY4 1499 aa17.82■□□□□ 0.44
PVT1-208ENST00000519481 HECW1Q76N89 1606 aa17.8■□□□□ 0.44
PVT1-208ENST00000519481 HECW2Q9P2P5 1572 aa17.8■□□□□ 0.44
PVT1-208ENST00000519481 FRMPD1Q5SYB0 1578 aa17.79■□□□□ 0.44
PVT1-208ENST00000519481 TTC37Q6PGP7 1564 aa17.78■□□□□ 0.44
PVT1-208ENST00000519481 PLCH2O75038 1416 aa17.76■□□□□ 0.43
PVT1-208ENST00000519481 EFCAB2Q5VUJ9 269 aa17.75■□□□□ 0.43
PVT1-208ENST00000519481 ARHGEF40Q8TER5 1519 aa17.74■□□□□ 0.43
PVT1-208ENST00000519481 RICTORQ6R327 1708 aa17.74■□□□□ 0.43
PVT1-208ENST00000519481 PTPRMP28827 1452 aa17.74■□□□□ 0.43
PVT1-208ENST00000519481 ADAMTSL3P82987 1691 aa17.74■□□□□ 0.43
PVT1-208ENST00000519481 CLIP1P30622 1438 aa17.73■□□□□ 0.43
PVT1-208ENST00000519481 POGZQ7Z3K3 1410 aa17.72■□□□□ 0.43
PVT1-208ENST00000519481 SCAPERQ9BY12 1400 aa17.72■□□□□ 0.43
PVT1-208ENST00000519481 BCORL1Q5H9F3 1711 aa17.72■□□□□ 0.43
PVT1-208ENST00000519481 MAGI2Q86UL8 1455 aa17.71■□□□□ 0.43
PVT1-208ENST00000519481 ZMYM4Q5VZL5 1548 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms