RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-210ENST00000519362 FHAD1B1AJZ9 1412 aa18.75■□□□□ 0.59
SPIDR-210ENST00000519362 TIAM1Q13009 1591 aa18.73■□□□□ 0.59
SPIDR-210ENST00000519362 HNRNPUL2Q1KMD3 747 aaKnown RBP18.72■□□□□ 0.59
SPIDR-210ENST00000519362 RRBP1Q9P2E9 1410 aaKnown RBP18.72■□□□□ 0.59
SPIDR-210ENST00000519362 WDR62O43379 1518 aa18.71■□□□□ 0.59
SPIDR-210ENST00000519362 PBRM1Q86U86 1689 aa18.69■□□□□ 0.58
SPIDR-210ENST00000519362 PCF11O94913 1555 aaKnown RBP18.68■□□□□ 0.58
SPIDR-210ENST00000519362 FHOD3Q2V2M9 1422 aa18.68■□□□□ 0.58
SPIDR-210ENST00000519362 AQRO60306 1485 aaKnown RBP eCLIP18.67■□□□□ 0.58
SPIDR-210ENST00000519362 CFAP43Q8NDM7 1665 aa18.66■□□□□ 0.58
SPIDR-210ENST00000519362 SAMD9Q5K651 1589 aa18.65■□□□□ 0.58
SPIDR-210ENST00000519362 LRRC9Q6ZRR7 1453 aa18.65■□□□□ 0.58
SPIDR-210ENST00000519362 IFT140Q96RY7 1462 aa18.64■□□□□ 0.57
SPIDR-210ENST00000519362 FYCO1Q9BQS8 1478 aa18.64■□□□□ 0.57
SPIDR-210ENST00000519362 P3H3Q8IVL6 736 aa18.64■□□□□ 0.57
SPIDR-210ENST00000519362 CASKIN1Q8WXD9 1431 aa18.63■□□□□ 0.57
SPIDR-210ENST00000519362 ADAMTS12P58397 1594 aa18.62■□□□□ 0.57
SPIDR-210ENST00000519362 GRIN2BQ13224 1484 aa18.61■□□□□ 0.57
SPIDR-210ENST00000519362 CCNB3Q8WWL7 1395 aa18.61■□□□□ 0.57
SPIDR-210ENST00000519362 FMN1Q68DA7 1419 aa18.6■□□□□ 0.57
SPIDR-210ENST00000519362 SNAPC4Q5SXM2 1469 aa18.58■□□□□ 0.56
SPIDR-210ENST00000519362 ZNF608Q9ULD9 1512 aaPredicted RBP18.57■□□□□ 0.56
SPIDR-210ENST00000519362 THOC2Q8NI27 1593 aaKnown RBP18.56■□□□□ 0.56
SPIDR-210ENST00000519362 ERCC6Q03468 1493 aa18.55■□□□□ 0.56
SPIDR-210ENST00000519362 PHLDB1Q86UU1 1377 aa18.51■□□□□ 0.55
SPIDR-210ENST00000519362 IQGAP2Q13576 1575 aa18.51■□□□□ 0.55
SPIDR-210ENST00000519362 EIF4G3O43432 1585 aaKnown RBP18.49■□□□□ 0.55
SPIDR-210ENST00000519362 ATP1B4Q9UN42 357 aaPredicted RBP18.47■□□□□ 0.55
SPIDR-210ENST00000519362 LRRIQ1Q96JM4 1722 aa18.46■□□□□ 0.55
SPIDR-210ENST00000519362 CLSPNQ9HAW4 1339 aa18.45■□□□□ 0.54
SPIDR-210ENST00000519362 DHX57Q6P158 1386 aaKnown RBP18.44■□□□□ 0.54
SPIDR-210ENST00000519362 UGGT2Q9NYU1 1516 aa18.43■□□□□ 0.54
SPIDR-210ENST00000519362 GRIN2AQ12879 1464 aa18.41■□□□□ 0.54
SPIDR-210ENST00000519362 KIAA0586Q9BVV6 1533 aa18.4■□□□□ 0.54
SPIDR-210ENST00000519362 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.4■□□□□ 0.54
SPIDR-210ENST00000519362 MAGI1Q96QZ7 1491 aaPredicted RBP18.39■□□□□ 0.54
SPIDR-210ENST00000519362 MTUS2Q5JR59 1369 aa18.37■□□□□ 0.53
SPIDR-210ENST00000519362 CCDC18Q5T9S5 1454 aa18.36■□□□□ 0.53
SPIDR-210ENST00000519362 ITGAEP38570 1179 aa18.36■□□□□ 0.53
SPIDR-210ENST00000519362 HECW1Q76N89 1606 aa18.36■□□□□ 0.53
SPIDR-210ENST00000519362 EHBP1L1Q8N3D4 1523 aa18.35■□□□□ 0.53
SPIDR-210ENST00000519362 SYNJ2O15056 1496 aa18.33■□□□□ 0.53
SPIDR-210ENST00000519362 FGD6Q6ZV73 1430 aa18.33■□□□□ 0.53
SPIDR-210ENST00000519362 DISP1Q96F81 1524 aa18.33■□□□□ 0.52
SPIDR-210ENST00000519362 RAB3GAP2Q9H2M9 1393 aa18.33■□□□□ 0.52
SPIDR-210ENST00000519362 FAM50AQ14320 339 aaKnown RBP18.33■□□□□ 0.52
SPIDR-210ENST00000519362 KIAA0556O60303 1618 aa18.32■□□□□ 0.52
SPIDR-210ENST00000519362 NCOA2Q15596 1464 aa18.32■□□□□ 0.52
SPIDR-210ENST00000519362 SETD5Q9C0A6 1442 aa18.32■□□□□ 0.52
SPIDR-210ENST00000519362 SUPT6HQ7KZ85 1726 aaKnown RBP18.31■□□□□ 0.52
SPIDR-210ENST00000519362 ARHGEF11O15085 1522 aa18.31■□□□□ 0.52
SPIDR-210ENST00000519362 MAGI3Q5TCQ9 1506 aa18.31■□□□□ 0.52
SPIDR-210ENST00000519362 EPRSP07814 1512 aaKnown RBP18.3■□□□□ 0.52
SPIDR-210ENST00000519362 CEP170Q5SW79 1584 aa18.28■□□□□ 0.52
SPIDR-210ENST00000519362 MYOM3Q5VTT5 1437 aa18.28■□□□□ 0.52
SPIDR-210ENST00000519362 ZNF316A6NFI3 1004 aaPredicted RBP18.27■□□□□ 0.52
SPIDR-210ENST00000519362 CHMP7Q8WUX9 453 aaPredicted RBP18.26■□□□□ 0.51
SPIDR-210ENST00000519362 NUP160Q12769 1436 aa18.25■□□□□ 0.51
SPIDR-210ENST00000519362 DNAJC5Q9H3Z4 198 aa18.23■□□□□ 0.51
SPIDR-210ENST00000519362 DIEXFQ68CQ4 756 aaKnown RBP18.23■□□□□ 0.51
SPIDR-210ENST00000519362 CDK13Q14004 1512 aaKnown RBP18.22■□□□□ 0.51
SPIDR-210ENST00000519362 MAPKBP1O60336 1514 aa18.22■□□□□ 0.51
SPIDR-210ENST00000519362 RAPGEF6Q8TEU7 1601 aa18.19■□□□□ 0.5
SPIDR-210ENST00000519362 NUP153P49790 1475 aaKnown RBP18.19■□□□□ 0.5
SPIDR-210ENST00000519362 PTPN23Q9H3S7 1636 aa18.19■□□□□ 0.5
SPIDR-210ENST00000519362 PTPRKQ15262 1439 aa18.18■□□□□ 0.5
SPIDR-210ENST00000519362 TCOF1Q13428 1488 aaKnown RBP18.18■□□□□ 0.5
SPIDR-210ENST00000519362 HFM1A2PYH4 1435 aa18.15■□□□□ 0.5
SPIDR-210ENST00000519362 FBLN2P98095 1184 aa18.15■□□□□ 0.5
SPIDR-210ENST00000519362 MIA2Q96PC5 1412 aa18.13■□□□□ 0.49
SPIDR-210ENST00000519362 JPH4Q96JJ6 628 aa18.13■□□□□ 0.49
SPIDR-210ENST00000519362 CARMIL2Q6F5E8 1435 aa18.13■□□□□ 0.49
SPIDR-210ENST00000519362 NAIPQ13075 1403 aa18.09■□□□□ 0.49
SPIDR-210ENST00000519362 PLB1Q6P1J6 1458 aa18.08■□□□□ 0.48
SPIDR-210ENST00000519362 ARID3CA6NKF2 412 aa18.08■□□□□ 0.48
SPIDR-210ENST00000519362 CDK11AQ9UQ88 783 aaPredicted RBP18.05■□□□□ 0.48
SPIDR-210ENST00000519362 AKNAQ7Z591 1439 aa18.05■□□□□ 0.48
SPIDR-210ENST00000519362 UACAQ9BZF9 1416 aa18.04■□□□□ 0.48
SPIDR-210ENST00000519362 TROQ12816 1431 aaPredicted RBP18.03■□□□□ 0.48
SPIDR-210ENST00000519362 ABCA8O94911 1581 aa18.03■□□□□ 0.48
SPIDR-210ENST00000519362 GCC2Q8IWJ2 1684 aa18.02■□□□□ 0.48
SPIDR-210ENST00000519362 ADCY10Q96PN6 1610 aa18.01■□□□□ 0.47
SPIDR-210ENST00000519362 TIMELESSQ9UNS1 1208 aa18■□□□□ 0.47
SPIDR-210ENST00000519362 PRG4Q92954 1404 aaPredicted RBP18■□□□□ 0.47
SPIDR-210ENST00000519362 CHD1O14646 1710 aa18■□□□□ 0.47
SPIDR-210ENST00000519362 SIN3AQ96ST3 1273 aa17.98■□□□□ 0.47
SPIDR-210ENST00000519362 DNMT1P26358 1616 aaKnown RBP17.96■□□□□ 0.47
SPIDR-210ENST00000519362 DAPK1P53355 1430 aa17.95■□□□□ 0.46
SPIDR-210ENST00000519362 KIF14Q15058 1648 aa17.95■□□□□ 0.46
SPIDR-210ENST00000519362 ITSN2Q9NZM3 1697 aa17.94■□□□□ 0.46
SPIDR-210ENST00000519362 SHROOM2Q13796 1616 aa17.94■□□□□ 0.46
SPIDR-210ENST00000519362 ROCK1Q13464 1354 aa17.94■□□□□ 0.46
SPIDR-210ENST00000519362 ATP10BO94823 1461 aa17.94■□□□□ 0.46
SPIDR-210ENST00000519362 ABCC5O15440 1437 aa17.93■□□□□ 0.46
SPIDR-210ENST00000519362 RRP7BPQ9NSQ0 103 aa17.93■□□□□ 0.46
SPIDR-210ENST00000519362 CHIC2Q9UKJ5 165 aa17.93■□□□□ 0.46
SPIDR-210ENST00000519362 GPATCH8Q9UKJ3 1502 aaKnown RBP17.93■□□□□ 0.46
SPIDR-210ENST00000519362 NEUROD1Q13562 356 aa17.92■□□□□ 0.46
SPIDR-210ENST00000519362 KDM6BO15054 1643 aa17.91■□□□□ 0.46
SPIDR-210ENST00000519362 PTPRGP23470 1445 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms