RNA–Protein interactions for RNA: ENST00000519222.5

CSGALNACT1-207, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-207ENST00000519222 TARBP1Q13395 1621 aaKnown RBP27.21■■□□□ 1.95
CSGALNACT1-207ENST00000519222 FHOD3Q2V2M9 1422 aa27.18■■□□□ 1.94
CSGALNACT1-207ENST00000519222 ERCC6Q03468 1493 aa27.15■■□□□ 1.94
CSGALNACT1-207ENST00000519222 ZNF608Q9ULD9 1512 aaPredicted RBP27.09■■□□□ 1.93
CSGALNACT1-207ENST00000519222 FHAD1B1AJZ9 1412 aa27.05■■□□□ 1.92
CSGALNACT1-207ENST00000519222 WDR62O43379 1518 aa27.03■■□□□ 1.92
CSGALNACT1-207ENST00000519222 ITGAEP38570 1179 aa27■■□□□ 1.91
CSGALNACT1-207ENST00000519222 CTTNBP2Q8WZ74 1663 aa27■■□□□ 1.91
CSGALNACT1-207ENST00000519222 IFT140Q96RY7 1462 aa27■■□□□ 1.91
CSGALNACT1-207ENST00000519222 PCF11O94913 1555 aaKnown RBP26.97■■□□□ 1.91
CSGALNACT1-207ENST00000519222 TIAM1Q13009 1591 aa26.97■■□□□ 1.91
CSGALNACT1-207ENST00000519222 GRIN2BQ13224 1484 aa26.97■■□□□ 1.91
CSGALNACT1-207ENST00000519222 EFCAB5A4FU69 1503 aa26.97■■□□□ 1.91
CSGALNACT1-207ENST00000519222 PBRM1Q86U86 1689 aa26.93■■□□□ 1.9
CSGALNACT1-207ENST00000519222 LRRC9Q6ZRR7 1453 aa26.93■■□□□ 1.9
CSGALNACT1-207ENST00000519222 RRBP1Q9P2E9 1410 aaKnown RBP26.93■■□□□ 1.9
CSGALNACT1-207ENST00000519222 CCNB3Q8WWL7 1395 aa26.92■■□□□ 1.9
CSGALNACT1-207ENST00000519222 CASKIN1Q8WXD9 1431 aa26.89■■□□□ 1.9
CSGALNACT1-207ENST00000519222 MAP3K1Q13233 1512 aa26.88■■□□□ 1.89
CSGALNACT1-207ENST00000519222 FMN1Q68DA7 1419 aa26.88■■□□□ 1.89
CSGALNACT1-207ENST00000519222 PHLDB1Q86UU1 1377 aa26.87■■□□□ 1.89
CSGALNACT1-207ENST00000519222 ADAMTS12P58397 1594 aa26.87■■□□□ 1.89
CSGALNACT1-207ENST00000519222 FYCO1Q9BQS8 1478 aa26.85■■□□□ 1.89
CSGALNACT1-207ENST00000519222 FBLN2P98095 1184 aa26.83■■□□□ 1.89
CSGALNACT1-207ENST00000519222 SNAPC4Q5SXM2 1469 aa26.83■■□□□ 1.89
CSGALNACT1-207ENST00000519222 THOC2Q8NI27 1593 aaKnown RBP26.83■■□□□ 1.89
CSGALNACT1-207ENST00000519222 FAM50AQ14320 339 aaKnown RBP26.82■■□□□ 1.88
CSGALNACT1-207ENST00000519222 SAMD9Q5K651 1589 aa26.81■■□□□ 1.88
CSGALNACT1-207ENST00000519222 EIF4G3O43432 1585 aaKnown RBP26.78■■□□□ 1.88
CSGALNACT1-207ENST00000519222 CHMP7Q8WUX9 453 aaPredicted RBP26.77■■□□□ 1.88
CSGALNACT1-207ENST00000519222 ARID3CA6NKF2 412 aa26.76■■□□□ 1.87
CSGALNACT1-207ENST00000519222 IQGAP2Q13576 1575 aa26.74■■□□□ 1.87
CSGALNACT1-207ENST00000519222 CFAP43Q8NDM7 1665 aa26.73■■□□□ 1.87
CSGALNACT1-207ENST00000519222 MTUS2Q5JR59 1369 aa26.71■■□□□ 1.87
CSGALNACT1-207ENST00000519222 GRIN2AQ12879 1464 aa26.68■■□□□ 1.86
CSGALNACT1-207ENST00000519222 DHX57Q6P158 1386 aaKnown RBP26.65■■□□□ 1.86
CSGALNACT1-207ENST00000519222 KIAA0586Q9BVV6 1533 aa26.63■■□□□ 1.85
CSGALNACT1-207ENST00000519222 MAGI1Q96QZ7 1491 aaPredicted RBP26.59■■□□□ 1.85
CSGALNACT1-207ENST00000519222 LRRIQ1Q96JM4 1722 aa26.58■■□□□ 1.85
CSGALNACT1-207ENST00000519222 SYNJ2O15056 1496 aa26.58■■□□□ 1.84
CSGALNACT1-207ENST00000519222 UGGT2Q9NYU1 1516 aa26.57■■□□□ 1.84
CSGALNACT1-207ENST00000519222 RAB3GAP2Q9H2M9 1393 aa26.57■■□□□ 1.84
CSGALNACT1-207ENST00000519222 DISP1Q96F81 1524 aa26.54■■□□□ 1.84
CSGALNACT1-207ENST00000519222 NCOA2Q15596 1464 aa26.52■■□□□ 1.84
CSGALNACT1-207ENST00000519222 FGD6Q6ZV73 1430 aa26.51■■□□□ 1.83
CSGALNACT1-207ENST00000519222 MAGI3Q5TCQ9 1506 aa26.5■■□□□ 1.83
CSGALNACT1-207ENST00000519222 CEP170Q5SW79 1584 aa26.5■■□□□ 1.83
CSGALNACT1-207ENST00000519222 CDK13Q14004 1512 aaKnown RBP26.49■■□□□ 1.83
CSGALNACT1-207ENST00000519222 EPRSP07814 1512 aaKnown RBP26.49■■□□□ 1.83
CSGALNACT1-207ENST00000519222 JPH4Q96JJ6 628 aa26.49■■□□□ 1.83
CSGALNACT1-207ENST00000519222 SETD5Q9C0A6 1442 aa26.48■■□□□ 1.83
CSGALNACT1-207ENST00000519222 KIAA0556O60303 1618 aa26.46■■□□□ 1.83
CSGALNACT1-207ENST00000519222 CCDC18Q5T9S5 1454 aa26.45■■□□□ 1.82
CSGALNACT1-207ENST00000519222 HECW1Q76N89 1606 aa26.44■■□□□ 1.82
CSGALNACT1-207ENST00000519222 CLSPNQ9HAW4 1339 aa26.44■■□□□ 1.82
CSGALNACT1-207ENST00000519222 MYOM3Q5VTT5 1437 aa26.42■■□□□ 1.82
CSGALNACT1-207ENST00000519222 ZNF316A6NFI3 1004 aaPredicted RBP26.42■■□□□ 1.82
CSGALNACT1-207ENST00000519222 EHBP1L1Q8N3D4 1523 aa26.41■■□□□ 1.82
CSGALNACT1-207ENST00000519222 DIEXFQ68CQ4 756 aaKnown RBP26.41■■□□□ 1.82
CSGALNACT1-207ENST00000519222 NUP160Q12769 1436 aa26.39■■□□□ 1.82
CSGALNACT1-207ENST00000519222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.39■■□□□ 1.81
CSGALNACT1-207ENST00000519222 PTPRKQ15262 1439 aa26.38■■□□□ 1.81
CSGALNACT1-207ENST00000519222 SUPT6HQ7KZ85 1726 aaKnown RBP26.36■■□□□ 1.81
CSGALNACT1-207ENST00000519222 NUP153P49790 1475 aaKnown RBP26.35■■□□□ 1.81
CSGALNACT1-207ENST00000519222 PLB1Q6P1J6 1458 aa26.34■■□□□ 1.81
CSGALNACT1-207ENST00000519222 CHIC2Q9UKJ5 165 aa26.32■■□□□ 1.8
CSGALNACT1-207ENST00000519222 CARMIL2Q6F5E8 1435 aa26.31■■□□□ 1.8
CSGALNACT1-207ENST00000519222 ARHGEF11O15085 1522 aa26.3■■□□□ 1.8
CSGALNACT1-207ENST00000519222 SIN3AQ96ST3 1273 aa26.27■■□□□ 1.8
CSGALNACT1-207ENST00000519222 RAPGEF6Q8TEU7 1601 aa26.26■■□□□ 1.79
CSGALNACT1-207ENST00000519222 NEUROD1Q13562 356 aa26.26■■□□□ 1.79
CSGALNACT1-207ENST00000519222 CDK11AQ9UQ88 783 aaPredicted RBP26.26■■□□□ 1.79
CSGALNACT1-207ENST00000519222 MAPKBP1O60336 1514 aa26.26■■□□□ 1.79
CSGALNACT1-207ENST00000519222 RRP7BPQ9NSQ0 103 aa26.25■■□□□ 1.79
CSGALNACT1-207ENST00000519222 PTPN23Q9H3S7 1636 aa26.23■■□□□ 1.79
CSGALNACT1-207ENST00000519222 PRG4Q92954 1404 aaPredicted RBP26.23■■□□□ 1.79
CSGALNACT1-207ENST00000519222 ZNF644Q9H582 1327 aaPredicted RBP26.21■■□□□ 1.79
CSGALNACT1-207ENST00000519222 HFM1A2PYH4 1435 aa26.18■■□□□ 1.78
CSGALNACT1-207ENST00000519222 NAIPQ13075 1403 aa26.16■■□□□ 1.78
CSGALNACT1-207ENST00000519222 TCOF1Q13428 1488 aaKnown RBP26.13■■□□□ 1.77
CSGALNACT1-207ENST00000519222 MIA2Q96PC5 1412 aa26.13■■□□□ 1.77
CSGALNACT1-207ENST00000519222 ZNF777Q9ULD5 760 aaPredicted RBP26.1■■□□□ 1.77
CSGALNACT1-207ENST00000519222 TROQ12816 1431 aaPredicted RBP26.1■■□□□ 1.77
CSGALNACT1-207ENST00000519222 PTPRGP23470 1445 aa26.09■■□□□ 1.77
CSGALNACT1-207ENST00000519222 PLEKHD1A6NEE1 506 aa26.08■■□□□ 1.77
CSGALNACT1-207ENST00000519222 CFDP1Q9UEE9 299 aaPredicted RBP26.07■■□□□ 1.76
CSGALNACT1-207ENST00000519222 CHD1O14646 1710 aa26.07■■□□□ 1.76
CSGALNACT1-207ENST00000519222 ATP10BO94823 1461 aa26.04■■□□□ 1.76
CSGALNACT1-207ENST00000519222 TRIM52Q96A61 297 aa26.04■■□□□ 1.76
CSGALNACT1-207ENST00000519222 UACAQ9BZF9 1416 aa26.02■■□□□ 1.76
CSGALNACT1-207ENST00000519222 ABCA8O94911 1581 aa26.01■■□□□ 1.75
CSGALNACT1-207ENST00000519222 KIF14Q15058 1648 aa25.99■■□□□ 1.75
CSGALNACT1-207ENST00000519222 DAPK1P53355 1430 aa25.98■■□□□ 1.75
CSGALNACT1-207ENST00000519222 ABCC5O15440 1437 aa25.98■■□□□ 1.75
CSGALNACT1-207ENST00000519222 GPATCH8Q9UKJ3 1502 aaKnown RBP25.97■■□□□ 1.75
CSGALNACT1-207ENST00000519222 MIER1Q8N108 512 aa25.97■■□□□ 1.75
CSGALNACT1-207ENST00000519222 ERCC6L2Q5T890 1561 aa25.94■■□□□ 1.74
CSGALNACT1-207ENST00000519222 KDM6BO15054 1643 aa25.93■■□□□ 1.74
CSGALNACT1-207ENST00000519222 FOXD1Q16676 465 aa25.9■■□□□ 1.74
CSGALNACT1-207ENST00000519222 CAMSAP2Q08AD1 1489 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms