RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 NUP160Q12769 1436 aa12.79□□□□□ -0.36
SDCBP-206ENST00000519115 CARMIL1Q5VZK9 1371 aa12.74□□□□□ -0.37
SDCBP-206ENST00000519115 ARAP1Q96P48 1450 aa12.73□□□□□ -0.37
SDCBP-206ENST00000519115 POTEDQ86YR6 584 aa12.73□□□□□ -0.37
SDCBP-206ENST00000519115 SHROOM2Q13796 1616 aa12.73□□□□□ -0.37
SDCBP-206ENST00000519115 ERCC6L2Q5T890 1561 aa12.72□□□□□ -0.37
SDCBP-206ENST00000519115 RAPGEF2Q9Y4G8 1499 aa12.68□□□□□ -0.38
SDCBP-206ENST00000519115 CYB5RLQ6IPT4 315 aa12.67□□□□□ -0.38
SDCBP-206ENST00000519115 CTTNBP2Q8WZ74 1663 aa12.66□□□□□ -0.38
SDCBP-206ENST00000519115 KIAA0586Q9BVV6 1533 aa12.66□□□□□ -0.38
SDCBP-206ENST00000519115 IQGAP2Q13576 1575 aa12.64□□□□□ -0.39
SDCBP-206ENST00000519115 PRG4Q92954 1404 aaPredicted RBP12.64□□□□□ -0.39
SDCBP-206ENST00000519115 PRXQ9BXM0 1461 aa12.64□□□□□ -0.39
SDCBP-206ENST00000519115 MSH5O43196 834 aa12.63□□□□□ -0.39
SDCBP-206ENST00000519115 JPH4Q96JJ6 628 aa12.63□□□□□ -0.39
SDCBP-206ENST00000519115 EEA1Q15075 1411 aa12.62□□□□□ -0.39
SDCBP-206ENST00000519115 FAM9AQ8IZU1 332 aaPredicted RBP12.62□□□□□ -0.39
SDCBP-206ENST00000519115 PPP6R1Q9UPN7 881 aa12.62□□□□□ -0.39
SDCBP-206ENST00000519115 ADRA2BP18089 450 aa12.61□□□□□ -0.39
SDCBP-206ENST00000519115 CSRNP3Q8WYN3 585 aa12.59□□□□□ -0.39
SDCBP-206ENST00000519115 KIF21BO75037 1637 aa12.55□□□□□ -0.4
SDCBP-206ENST00000519115 ILDR1Q86SU0 546 aaPredicted RBP12.55□□□□□ -0.4
SDCBP-206ENST00000519115 UGGT2Q9NYU1 1516 aa12.55□□□□□ -0.4
SDCBP-206ENST00000519115 KIAA0556O60303 1618 aa12.53□□□□□ -0.4
SDCBP-206ENST00000519115 CARMIL2Q6F5E8 1435 aa12.53□□□□□ -0.4
SDCBP-206ENST00000519115 DISP1Q96F81 1524 aa12.52□□□□□ -0.4
SDCBP-206ENST00000519115 TTBK1Q5TCY1 1321 aaPredicted RBP12.51□□□□□ -0.41
SDCBP-206ENST00000519115 EHMT2Q96KQ7 1210 aa12.5□□□□□ -0.41
SDCBP-206ENST00000519115 ADCY10Q96PN6 1610 aa12.5□□□□□ -0.41
SDCBP-206ENST00000519115 TNIKQ9UKE5 1360 aa12.48□□□□□ -0.41
SDCBP-206ENST00000519115 PTPRGP23470 1445 aa12.47□□□□□ -0.41
SDCBP-206ENST00000519115 GOLGA3Q08378 1498 aa12.46□□□□□ -0.42
SDCBP-206ENST00000519115 SAMD9Q5K651 1589 aa12.43□□□□□ -0.42
SDCBP-206ENST00000519115 RANGAP1P46060 587 aaPredicted RBP12.43□□□□□ -0.42
SDCBP-206ENST00000519115 TRHP20396 242 aaPredicted RBP12.42□□□□□ -0.42
SDCBP-206ENST00000519115 PIAS4Q8N2W9 510 aaPredicted RBP12.41□□□□□ -0.42
SDCBP-206ENST00000519115 UBTFP17480 764 aaKnown RBP12.4□□□□□ -0.42
SDCBP-206ENST00000519115 P3H3Q8IVL6 736 aa12.4□□□□□ -0.42
SDCBP-206ENST00000519115 ABCC2Q92887 1545 aa12.4□□□□□ -0.42
SDCBP-206ENST00000519115 KIF13AQ9H1H9 1805 aa12.39□□□□□ -0.43
SDCBP-206ENST00000519115 UACAQ9BZF9 1416 aa12.39□□□□□ -0.43
SDCBP-206ENST00000519115 PLB1Q6P1J6 1458 aa12.39□□□□□ -0.43
SDCBP-206ENST00000519115 UHRF1BP1LA0JNW5 1464 aa12.38□□□□□ -0.43
SDCBP-206ENST00000519115 MAPKBP1O60336 1514 aa12.37□□□□□ -0.43
SDCBP-206ENST00000519115 ZCCHC11Q5TAX3 1644 aaKnown RBP12.37□□□□□ -0.43
SDCBP-206ENST00000519115 ABCA8O94911 1581 aa12.37□□□□□ -0.43
SDCBP-206ENST00000519115 EFCAB5A4FU69 1503 aa12.37□□□□□ -0.43
SDCBP-206ENST00000519115 NPM1P06748 294 aaKnown RBP eCLIP12.36□□□□□ -0.43
SDCBP-206ENST00000519115 FHOD3Q2V2M9 1422 aa12.36□□□□□ -0.43
SDCBP-206ENST00000519115 RAPGEF6Q8TEU7 1601 aa12.33□□□□□ -0.43
SDCBP-206ENST00000519115 KDM5BQ9UGL1 1544 aa12.33□□□□□ -0.44
SDCBP-206ENST00000519115 DIP2BQ9P265 1576 aa12.33□□□□□ -0.44
SDCBP-206ENST00000519115 ARHGAP35Q9NRY4 1499 aa12.31□□□□□ -0.44
SDCBP-206ENST00000519115 ASXL2Q76L83 1435 aa12.3□□□□□ -0.44
SDCBP-206ENST00000519115 TSPOAP1O95153 1857 aa12.3□□□□□ -0.44
SDCBP-206ENST00000519115 ABCC10Q5T3U5 1492 aa12.3□□□□□ -0.44
SDCBP-206ENST00000519115 ARID3CA6NKF2 412 aa12.29□□□□□ -0.44
SDCBP-206ENST00000519115 FAM69CQ0P6D2 419 aa12.27□□□□□ -0.45
SDCBP-206ENST00000519115 NUP153P49790 1475 aaKnown RBP12.26□□□□□ -0.45
SDCBP-206ENST00000519115 ATP10BO94823 1461 aa12.25□□□□□ -0.45
SDCBP-206ENST00000519115 WDR7Q9Y4E6 1490 aa12.25□□□□□ -0.45
SDCBP-206ENST00000519115 EPRSP07814 1512 aaKnown RBP12.23□□□□□ -0.45
SDCBP-206ENST00000519115 CLIP1P30622 1438 aa12.23□□□□□ -0.45
SDCBP-206ENST00000519115 HECW1Q76N89 1606 aa12.22□□□□□ -0.45
SDCBP-206ENST00000519115 GLI2P10070 1586 aa12.22□□□□□ -0.45
SDCBP-206ENST00000519115 FMN1Q68DA7 1419 aa12.22□□□□□ -0.45
SDCBP-206ENST00000519115 LRRIQ1Q96JM4 1722 aa12.22□□□□□ -0.45
SDCBP-206ENST00000519115 PPRC1Q5VV67 1664 aaKnown RBP12.22□□□□□ -0.45
SDCBP-206ENST00000519115 PCF11O94913 1555 aaKnown RBP12.22□□□□□ -0.45
SDCBP-206ENST00000519115 MAP3K4Q9Y6R4 1608 aa12.21□□□□□ -0.46
SDCBP-206ENST00000519115 CDK13Q14004 1512 aaKnown RBP12.21□□□□□ -0.46
SDCBP-206ENST00000519115 LOC105371045A0A1W2PR82 267 aa12.2□□□□□ -0.46
SDCBP-206ENST00000519115 CEP162Q5TB80 1403 aa12.2□□□□□ -0.46
SDCBP-206ENST00000519115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.19□□□□□ -0.46
SDCBP-206ENST00000519115 HNRNPUL2Q1KMD3 747 aaKnown RBP12.19□□□□□ -0.46
SDCBP-206ENST00000519115 KCNH8Q96L42 1107 aa12.18□□□□□ -0.46
SDCBP-206ENST00000519115 ATP1B4Q9UN42 357 aaPredicted RBP12.18□□□□□ -0.46
SDCBP-206ENST00000519115 CFAP43Q8NDM7 1665 aa12.18□□□□□ -0.46
SDCBP-206ENST00000519115 ABCA9Q8IUA7 1624 aa12.15□□□□□ -0.47
SDCBP-206ENST00000519115 KDM6BO15054 1643 aa12.14□□□□□ -0.47
SDCBP-206ENST00000519115 CASKIN1Q8WXD9 1431 aa12.13□□□□□ -0.47
SDCBP-206ENST00000519115 FYCO1Q9BQS8 1478 aa12.13□□□□□ -0.47
SDCBP-206ENST00000519115 CD109Q6YHK3 1445 aa12.11□□□□□ -0.47
SDCBP-206ENST00000519115 TTC37Q6PGP7 1564 aa12.11□□□□□ -0.47
SDCBP-206ENST00000519115 TEX14Q8IWB6 1497 aa12.1□□□□□ -0.47
SDCBP-206ENST00000519115 PLEKHD1A6NEE1 506 aa12.1□□□□□ -0.47
SDCBP-206ENST00000519115 KIF14Q15058 1648 aa12.1□□□□□ -0.47
SDCBP-206ENST00000519115 CCDC18Q5T9S5 1454 aa12.09□□□□□ -0.47
SDCBP-206ENST00000519115 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.09□□□□□ -0.47
SDCBP-206ENST00000519115 MAGI3Q5TCQ9 1506 aa12.08□□□□□ -0.48
SDCBP-206ENST00000519115 MYO5CQ9NQX4 1742 aa12.06□□□□□ -0.48
SDCBP-206ENST00000519115 TROQ12816 1431 aaPredicted RBP12.06□□□□□ -0.48
SDCBP-206ENST00000519115 COL17A1Q9UMD9 1497 aaPredicted RBP12.05□□□□□ -0.48
SDCBP-206ENST00000519115 CDK11AQ9UQ88 783 aaPredicted RBP12.04□□□□□ -0.48
SDCBP-206ENST00000519115 VPS8Q8N3P4 1428 aa12.03□□□□□ -0.48
SDCBP-206ENST00000519115 CFAP74Q9C0B2 1584 aa12.02□□□□□ -0.49
SDCBP-206ENST00000519115 CDC42BPAQ5VT25 1732 aa12□□□□□ -0.49
SDCBP-206ENST00000519115 FANCAO15360 1455 aa12□□□□□ -0.49
SDCBP-206ENST00000519115 NEO1Q92859 1461 aa12□□□□□ -0.49
SDCBP-206ENST00000519115 CDC42BPBQ9Y5S2 1711 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms