RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 PRG4Q92954 1404 aaPredicted RBP24.21■■□□□ 1.47
VDAC3-204ENST00000519072 RUSC2Q8N2Y8 1516 aa24.2■■□□□ 1.46
VDAC3-204ENST00000519072 JPH4Q96JJ6 628 aa24.18■■□□□ 1.46
VDAC3-204ENST00000519072 KIF13AQ9H1H9 1805 aa24.13■■□□□ 1.45
VDAC3-204ENST00000519072 CUL7Q14999 1698 aa24.08■■□□□ 1.45
VDAC3-204ENST00000519072 KIF27Q86VH2 1401 aa24.07■■□□□ 1.44
VDAC3-204ENST00000519072 IGF1RP08069 1367 aa24.06■■□□□ 1.44
VDAC3-204ENST00000519072 KIAA0586Q9BVV6 1533 aa24.05■■□□□ 1.44
VDAC3-204ENST00000519072 FOXD1Q16676 465 aa24■■□□□ 1.43
VDAC3-204ENST00000519072 MAPKBP1O60336 1514 aa23.99■■□□□ 1.43
VDAC3-204ENST00000519072 ADCY10Q96PN6 1610 aa23.99■■□□□ 1.43
VDAC3-204ENST00000519072 ABCC10Q5T3U5 1492 aa23.97■■□□□ 1.43
VDAC3-204ENST00000519072 NPM1P06748 294 aaKnown RBP eCLIP23.96■■□□□ 1.43
VDAC3-204ENST00000519072 DIP2BQ9P265 1576 aa23.92■■□□□ 1.42
VDAC3-204ENST00000519072 FAM69CQ0P6D2 419 aa23.91■■□□□ 1.42
VDAC3-204ENST00000519072 CARMIL1Q5VZK9 1371 aa23.9■■□□□ 1.42
VDAC3-204ENST00000519072 PTPRGP23470 1445 aa23.82■■□□□ 1.4
VDAC3-204ENST00000519072 IQGAP2Q13576 1575 aa23.81■■□□□ 1.4
VDAC3-204ENST00000519072 CARMIL2Q6F5E8 1435 aa23.8■■□□□ 1.4
VDAC3-204ENST00000519072 TNIKQ9UKE5 1360 aa23.78■■□□□ 1.4
VDAC3-204ENST00000519072 TSPOAP1O95153 1857 aa23.76■■□□□ 1.39
VDAC3-204ENST00000519072 ABCC2Q92887 1545 aa23.74■■□□□ 1.39
VDAC3-204ENST00000519072 KDM6BO15054 1643 aa23.73■■□□□ 1.39
VDAC3-204ENST00000519072 TTBK1Q5TCY1 1321 aaPredicted RBP23.7■■□□□ 1.38
VDAC3-204ENST00000519072 DISP1Q96F81 1524 aa23.69■■□□□ 1.38
VDAC3-204ENST00000519072 UHRF1BP1LA0JNW5 1464 aa23.69■■□□□ 1.38
VDAC3-204ENST00000519072 RAPGEF2Q9Y4G8 1499 aa23.68■■□□□ 1.38
VDAC3-204ENST00000519072 UGGT2Q9NYU1 1516 aa23.66■■□□□ 1.38
VDAC3-204ENST00000519072 PLB1Q6P1J6 1458 aa23.66■■□□□ 1.38
VDAC3-204ENST00000519072 UACAQ9BZF9 1416 aa23.65■■□□□ 1.38
VDAC3-204ENST00000519072 ASXL2Q76L83 1435 aa23.64■■□□□ 1.37
VDAC3-204ENST00000519072 GLI2P10070 1586 aa23.64■■□□□ 1.37
VDAC3-204ENST00000519072 PPRC1Q5VV67 1664 aaKnown RBP23.6■■□□□ 1.37
VDAC3-204ENST00000519072 KIAA0556O60303 1618 aa23.59■■□□□ 1.37
VDAC3-204ENST00000519072 KDM5BQ9UGL1 1544 aa23.58■■□□□ 1.36
VDAC3-204ENST00000519072 CTTNBP2Q8WZ74 1663 aa23.55■■□□□ 1.36
VDAC3-204ENST00000519072 ZCCHC11Q5TAX3 1644 aaKnown RBP23.54■■□□□ 1.36
VDAC3-204ENST00000519072 EPRSP07814 1512 aaKnown RBP23.52■■□□□ 1.36
VDAC3-204ENST00000519072 MAP3K4Q9Y6R4 1608 aa23.51■■□□□ 1.35
VDAC3-204ENST00000519072 KDM4FA0A1W2PPD8 638 aa23.5■■□□□ 1.35
VDAC3-204ENST00000519072 GOLGA3Q08378 1498 aa23.44■■□□□ 1.34
VDAC3-204ENST00000519072 TEX14Q8IWB6 1497 aa23.43■■□□□ 1.34
VDAC3-204ENST00000519072 PRXQ9BXM0 1461 aa23.42■■□□□ 1.34
VDAC3-204ENST00000519072 WDR7Q9Y4E6 1490 aa23.41■■□□□ 1.34
VDAC3-204ENST00000519072 COL17A1Q9UMD9 1497 aaPredicted RBP23.4■■□□□ 1.34
VDAC3-204ENST00000519072 ABCA8O94911 1581 aa23.39■■□□□ 1.33
VDAC3-204ENST00000519072 CFAP43Q8NDM7 1665 aa23.33■■□□□ 1.33
VDAC3-204ENST00000519072 ADGRL1O94910 1474 aa23.31■■□□□ 1.32
VDAC3-204ENST00000519072 MAGI3Q5TCQ9 1506 aa23.28■■□□□ 1.32
VDAC3-204ENST00000519072 CD109Q6YHK3 1445 aa23.26■■□□□ 1.31
VDAC3-204ENST00000519072 KCNH8Q96L42 1107 aa23.23■■□□□ 1.31
VDAC3-204ENST00000519072 SAMD9Q5K651 1589 aa23.19■■□□□ 1.3
VDAC3-204ENST00000519072 FAM9AQ8IZU1 332 aaPredicted RBP23.19■■□□□ 1.3
VDAC3-204ENST00000519072 CSRNP3Q8WYN3 585 aa23.18■■□□□ 1.3
VDAC3-204ENST00000519072 ATP10BO94823 1461 aa23.17■■□□□ 1.3
VDAC3-204ENST00000519072 P3H3Q8IVL6 736 aa23.16■■□□□ 1.3
VDAC3-204ENST00000519072 PLPPR3Q6T4P5 718 aa23.14■■□□□ 1.29
VDAC3-204ENST00000519072 RAPGEF6Q8TEU7 1601 aa23.12■■□□□ 1.29
VDAC3-204ENST00000519072 ABCA9Q8IUA7 1624 aa23.11■■□□□ 1.29
VDAC3-204ENST00000519072 ARID3CA6NKF2 412 aa23.11■■□□□ 1.29
VDAC3-204ENST00000519072 ARAP3Q8WWN8 1544 aa23.11■■□□□ 1.29
VDAC3-204ENST00000519072 EEA1Q15075 1411 aa23.09■■□□□ 1.29
VDAC3-204ENST00000519072 KIF21BO75037 1637 aa23.06■■□□□ 1.28
VDAC3-204ENST00000519072 PHLDB1Q86UU1 1377 aa23.04■■□□□ 1.28
VDAC3-204ENST00000519072 HECW2Q9P2P5 1572 aa23.04■■□□□ 1.28
VDAC3-204ENST00000519072 NUP153P49790 1475 aaKnown RBP23.01■■□□□ 1.27
VDAC3-204ENST00000519072 NEO1Q92859 1461 aa22.99■■□□□ 1.27
VDAC3-204ENST00000519072 FHOD3Q2V2M9 1422 aa22.98■■□□□ 1.27
VDAC3-204ENST00000519072 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.97■■□□□ 1.27
VDAC3-204ENST00000519072 HNRNPUL2Q1KMD3 747 aaKnown RBP22.97■■□□□ 1.27
VDAC3-204ENST00000519072 EFCAB5A4FU69 1503 aa22.93■■□□□ 1.26
VDAC3-204ENST00000519072 RANGAP1P46060 587 aaPredicted RBP22.93■■□□□ 1.26
VDAC3-204ENST00000519072 RAPGEF3O95398 923 aa22.91■■□□□ 1.26
VDAC3-204ENST00000519072 FRMPD1Q5SYB0 1578 aa22.91■■□□□ 1.26
VDAC3-204ENST00000519072 ADAMTSL3P82987 1691 aa22.9■■□□□ 1.26
VDAC3-204ENST00000519072 ILDR1Q86SU0 546 aaPredicted RBP22.89■■□□□ 1.25
VDAC3-204ENST00000519072 PLEKHD1A6NEE1 506 aa22.87■■□□□ 1.25
VDAC3-204ENST00000519072 CFAP74Q9C0B2 1584 aa22.84■■□□□ 1.25
VDAC3-204ENST00000519072 RICTORQ6R327 1708 aa22.84■■□□□ 1.25
VDAC3-204ENST00000519072 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.83■■□□□ 1.25
VDAC3-204ENST00000519072 BCORL1Q5H9F3 1711 aa22.83■■□□□ 1.25
VDAC3-204ENST00000519072 PTPRMP28827 1452 aa22.82■■□□□ 1.24
VDAC3-204ENST00000519072 ARHGEF40Q8TER5 1519 aa22.81■■□□□ 1.24
VDAC3-204ENST00000519072 AKNAQ7Z591 1439 aa22.81■■□□□ 1.24
VDAC3-204ENST00000519072 TTC37Q6PGP7 1564 aa22.8■■□□□ 1.24
VDAC3-204ENST00000519072 FANCAO15360 1455 aa22.8■■□□□ 1.24
VDAC3-204ENST00000519072 DENND4BO75064 1496 aaPredicted RBP22.8■■□□□ 1.24
VDAC3-204ENST00000519072 MADDQ8WXG6 1647 aa22.78■■□□□ 1.24
VDAC3-204ENST00000519072 CDK13Q14004 1512 aaKnown RBP22.77■■□□□ 1.24
VDAC3-204ENST00000519072 ARID4BQ4LE39 1312 aaPredicted RBP22.75■■□□□ 1.23
VDAC3-204ENST00000519072 ZMYM4Q5VZL5 1548 aa22.74■■□□□ 1.23
VDAC3-204ENST00000519072 HECW1Q76N89 1606 aa22.71■■□□□ 1.23
VDAC3-204ENST00000519072 FMN1Q68DA7 1419 aa22.71■■□□□ 1.23
VDAC3-204ENST00000519072 RIMS1Q86UR5 1692 aaKnown RBP22.69■■□□□ 1.22
VDAC3-204ENST00000519072 UBTFP17480 764 aaKnown RBP22.69■■□□□ 1.22
VDAC3-204ENST00000519072 ZFYVE16Q7Z3T8 1539 aa22.68■■□□□ 1.22
VDAC3-204ENST00000519072 ARHGAP35Q9NRY4 1499 aa22.68■■□□□ 1.22
VDAC3-204ENST00000519072 PLCH2O75038 1416 aa22.68■■□□□ 1.22
VDAC3-204ENST00000519072 MAGI2Q86UL8 1455 aa22.67■■□□□ 1.22
VDAC3-204ENST00000519072 MYO5CQ9NQX4 1742 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms