RNA–Protein interactions for RNA: ENST00000519047.5

HMBOX1-206, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-206ENST00000519047 CARMIL1Q5VZK9 1371 aa10.79□□□□□ -0.68
HMBOX1-206ENST00000519047 CLASP1Q7Z460 1538 aa10.78□□□□□ -0.68
HMBOX1-206ENST00000519047 NUP160Q12769 1436 aa10.78□□□□□ -0.68
HMBOX1-206ENST00000519047 CEP170Q5SW79 1584 aa10.77□□□□□ -0.69
HMBOX1-206ENST00000519047 MSH5O43196 834 aa10.77□□□□□ -0.69
HMBOX1-206ENST00000519047 EEA1Q15075 1411 aa10.74□□□□□ -0.69
HMBOX1-206ENST00000519047 CSRNP3Q8WYN3 585 aa10.73□□□□□ -0.69
HMBOX1-206ENST00000519047 RAPGEF2Q9Y4G8 1499 aa10.73□□□□□ -0.69
HMBOX1-206ENST00000519047 PRXQ9BXM0 1461 aa10.72□□□□□ -0.69
HMBOX1-206ENST00000519047 RIMBP3CA6NJZ7 1639 aa10.72□□□□□ -0.69
HMBOX1-206ENST00000519047 RIMBP3BA6NNM3 1639 aa10.72□□□□□ -0.69
HMBOX1-206ENST00000519047 RIMBP3Q9UFD9 1639 aa10.72□□□□□ -0.69
HMBOX1-206ENST00000519047 ARHGEF11O15085 1522 aa10.71□□□□□ -0.69
HMBOX1-206ENST00000519047 SHROOM2Q13796 1616 aa10.7□□□□□ -0.7
HMBOX1-206ENST00000519047 KIAA0586Q9BVV6 1533 aa10.7□□□□□ -0.7
HMBOX1-206ENST00000519047 JPH4Q96JJ6 628 aa10.69□□□□□ -0.7
HMBOX1-206ENST00000519047 FAM9AQ8IZU1 332 aaPredicted RBP10.68□□□□□ -0.7
HMBOX1-206ENST00000519047 EHMT2Q96KQ7 1210 aa10.67□□□□□ -0.7
HMBOX1-206ENST00000519047 SCAF1Q9H7N4 1312 aaKnown RBP10.66□□□□□ -0.7
HMBOX1-206ENST00000519047 ERCC6L2Q5T890 1561 aa10.64□□□□□ -0.71
HMBOX1-206ENST00000519047 ARAP1Q96P48 1450 aa10.64□□□□□ -0.71
HMBOX1-206ENST00000519047 IQGAP2Q13576 1575 aa10.64□□□□□ -0.71
HMBOX1-206ENST00000519047 CTTNBP2Q8WZ74 1663 aa10.64□□□□□ -0.71
HMBOX1-206ENST00000519047 PRG4Q92954 1404 aaPredicted RBP10.63□□□□□ -0.71
HMBOX1-206ENST00000519047 KIF21BO75037 1637 aa10.63□□□□□ -0.71
HMBOX1-206ENST00000519047 NPM3O75607 178 aaKnown RBP10.62□□□□□ -0.71
HMBOX1-206ENST00000519047 CYB5RLQ6IPT4 315 aa10.62□□□□□ -0.71
HMBOX1-206ENST00000519047 SLC4A1APQ9BWU0 796 aaKnown RBP10.62□□□□□ -0.71
HMBOX1-206ENST00000519047 CNKSR2Q8WXI2 1034 aa10.6□□□□□ -0.71
HMBOX1-206ENST00000519047 UGGT2Q9NYU1 1516 aa10.59□□□□□ -0.71
HMBOX1-206ENST00000519047 DISP1Q96F81 1524 aa10.57□□□□□ -0.72
HMBOX1-206ENST00000519047 CARMIL2Q6F5E8 1435 aa10.56□□□□□ -0.72
HMBOX1-206ENST00000519047 GOLGA3Q08378 1498 aa10.55□□□□□ -0.72
HMBOX1-206ENST00000519047 TNIKQ9UKE5 1360 aa10.53□□□□□ -0.72
HMBOX1-206ENST00000519047 KIAA0556O60303 1618 aa10.52□□□□□ -0.72
HMBOX1-206ENST00000519047 UBTFP17480 764 aaKnown RBP10.52□□□□□ -0.72
HMBOX1-206ENST00000519047 PTPRGP23470 1445 aa10.52□□□□□ -0.73
HMBOX1-206ENST00000519047 SAMD9Q5K651 1589 aa10.5□□□□□ -0.73
HMBOX1-206ENST00000519047 ADCY10Q96PN6 1610 aa10.47□□□□□ -0.73
HMBOX1-206ENST00000519047 TTBK1Q5TCY1 1321 aaPredicted RBP10.46□□□□□ -0.73
HMBOX1-206ENST00000519047 P3H3Q8IVL6 736 aa10.46□□□□□ -0.74
HMBOX1-206ENST00000519047 EFCAB5A4FU69 1503 aa10.45□□□□□ -0.74
HMBOX1-206ENST00000519047 UHRF1BP1LA0JNW5 1464 aa10.45□□□□□ -0.74
HMBOX1-206ENST00000519047 UACAQ9BZF9 1416 aa10.44□□□□□ -0.74
HMBOX1-206ENST00000519047 RANGAP1P46060 587 aaPredicted RBP10.44□□□□□ -0.74
HMBOX1-206ENST00000519047 ABCC2Q92887 1545 aa10.43□□□□□ -0.74
HMBOX1-206ENST00000519047 ABCA8O94911 1581 aa10.43□□□□□ -0.74
HMBOX1-206ENST00000519047 PLB1Q6P1J6 1458 aa10.42□□□□□ -0.74
HMBOX1-206ENST00000519047 ARHGAP35Q9NRY4 1499 aa10.42□□□□□ -0.74
HMBOX1-206ENST00000519047 LOC105371045A0A1W2PR82 267 aa10.42□□□□□ -0.74
HMBOX1-206ENST00000519047 NPM1P06748 294 aaKnown RBP eCLIP10.41□□□□□ -0.74
HMBOX1-206ENST00000519047 FHOD3Q2V2M9 1422 aa10.41□□□□□ -0.74
HMBOX1-206ENST00000519047 KDM5BQ9UGL1 1544 aa10.4□□□□□ -0.74
HMBOX1-206ENST00000519047 MAPK8IP2Q13387 824 aaPredicted RBP10.4□□□□□ -0.74
HMBOX1-206ENST00000519047 MAPKBP1O60336 1514 aa10.39□□□□□ -0.75
HMBOX1-206ENST00000519047 RAPGEF6Q8TEU7 1601 aa10.37□□□□□ -0.75
HMBOX1-206ENST00000519047 ZCCHC11Q5TAX3 1644 aaKnown RBP10.37□□□□□ -0.75
HMBOX1-206ENST00000519047 CLIP1P30622 1438 aa10.36□□□□□ -0.75
HMBOX1-206ENST00000519047 FMN1Q68DA7 1419 aa10.36□□□□□ -0.75
HMBOX1-206ENST00000519047 KIF13AQ9H1H9 1805 aa10.36□□□□□ -0.75
HMBOX1-206ENST00000519047 TRHP20396 242 aaPredicted RBP10.35□□□□□ -0.75
HMBOX1-206ENST00000519047 ATP10BO94823 1461 aa10.34□□□□□ -0.75
HMBOX1-206ENST00000519047 NUP153P49790 1475 aaKnown RBP10.34□□□□□ -0.75
HMBOX1-206ENST00000519047 CEP162Q5TB80 1403 aa10.34□□□□□ -0.75
HMBOX1-206ENST00000519047 ASXL2Q76L83 1435 aa10.34□□□□□ -0.75
HMBOX1-206ENST00000519047 ABCC10Q5T3U5 1492 aa10.34□□□□□ -0.75
HMBOX1-206ENST00000519047 DIP2BQ9P265 1576 aa10.31□□□□□ -0.76
HMBOX1-206ENST00000519047 POTEDQ86YR6 584 aa10.31□□□□□ -0.76
HMBOX1-206ENST00000519047 RNF216Q9NWF9 866 aaPredicted RBP10.31□□□□□ -0.76
HMBOX1-206ENST00000519047 ARID3CA6NKF2 412 aa10.3□□□□□ -0.76
HMBOX1-206ENST00000519047 FAM69CQ0P6D2 419 aa10.3□□□□□ -0.76
HMBOX1-206ENST00000519047 WDR7Q9Y4E6 1490 aa10.29□□□□□ -0.76
HMBOX1-206ENST00000519047 CASKIN1Q8WXD9 1431 aa10.29□□□□□ -0.76
HMBOX1-206ENST00000519047 LRRIQ1Q96JM4 1722 aa10.29□□□□□ -0.76
HMBOX1-206ENST00000519047 GLI2P10070 1586 aa10.29□□□□□ -0.76
HMBOX1-206ENST00000519047 HECW1Q76N89 1606 aa10.28□□□□□ -0.76
HMBOX1-206ENST00000519047 EPRSP07814 1512 aaKnown RBP10.28□□□□□ -0.76
HMBOX1-206ENST00000519047 PCF11O94913 1555 aaKnown RBP10.27□□□□□ -0.77
HMBOX1-206ENST00000519047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.26□□□□□ -0.77
HMBOX1-206ENST00000519047 HNRNPUL2Q1KMD3 747 aaKnown RBP10.26□□□□□ -0.77
HMBOX1-206ENST00000519047 ATP1B4Q9UN42 357 aaPredicted RBP10.26□□□□□ -0.77
HMBOX1-206ENST00000519047 FYCO1Q9BQS8 1478 aa10.26□□□□□ -0.77
HMBOX1-206ENST00000519047 PLEKHD1A6NEE1 506 aa10.26□□□□□ -0.77
HMBOX1-206ENST00000519047 CDK13Q14004 1512 aaKnown RBP10.25□□□□□ -0.77
HMBOX1-206ENST00000519047 TSPOAP1O95153 1857 aa10.25□□□□□ -0.77
HMBOX1-206ENST00000519047 KCNH8Q96L42 1107 aa10.25□□□□□ -0.77
HMBOX1-206ENST00000519047 DMRT2Q9Y5R5 561 aa10.25□□□□□ -0.77
HMBOX1-206ENST00000519047 MAP3K4Q9Y6R4 1608 aa10.25□□□□□ -0.77
HMBOX1-206ENST00000519047 CCDC18Q5T9S5 1454 aa10.23□□□□□ -0.77
HMBOX1-206ENST00000519047 CDK11AQ9UQ88 783 aaPredicted RBP10.22□□□□□ -0.77
HMBOX1-206ENST00000519047 PPRC1Q5VV67 1664 aaKnown RBP10.22□□□□□ -0.77
HMBOX1-206ENST00000519047 CFAP43Q8NDM7 1665 aa10.22□□□□□ -0.77
HMBOX1-206ENST00000519047 ABCA9Q8IUA7 1624 aa10.22□□□□□ -0.77
HMBOX1-206ENST00000519047 VPS8Q8N3P4 1428 aa10.21□□□□□ -0.77
HMBOX1-206ENST00000519047 ZBTB22O15209 634 aa10.2□□□□□ -0.78
HMBOX1-206ENST00000519047 CD109Q6YHK3 1445 aa10.2□□□□□ -0.78
HMBOX1-206ENST00000519047 TROQ12816 1431 aaPredicted RBP10.19□□□□□ -0.78
HMBOX1-206ENST00000519047 MAGI3Q5TCQ9 1506 aa10.19□□□□□ -0.78
HMBOX1-206ENST00000519047 HOXD11P31277 338 aaPredicted RBP10.18□□□□□ -0.78
HMBOX1-206ENST00000519047 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.18□□□□□ -0.782e-6■■□□□ 13.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms