RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 JPH4Q96JJ6 628 aa22.66■■□□□ 1.22
VEGFA-219ENST00000518824 PRG4Q92954 1404 aaPredicted RBP22.64■■□□□ 1.21
VEGFA-219ENST00000518824 KIAA0586Q9BVV6 1533 aa22.62■■□□□ 1.21
VEGFA-219ENST00000518824 RAPGEF2Q9Y4G8 1499 aa22.57■■□□□ 1.2
VEGFA-219ENST00000518824 CHIC1Q5VXU3 224 aa22.51■■□□□ 1.19
VEGFA-219ENST00000518824 PRXQ9BXM0 1461 aa22.49■■□□□ 1.19
VEGFA-219ENST00000518824 IQGAP2Q13576 1575 aa22.48■■□□□ 1.19
VEGFA-219ENST00000518824 FAM9AQ8IZU1 332 aaPredicted RBP22.42■■□□□ 1.18
VEGFA-219ENST00000518824 CSRNP3Q8WYN3 585 aa22.42■■□□□ 1.18
VEGFA-219ENST00000518824 TRHP20396 242 aaPredicted RBP22.41■■□□□ 1.18
VEGFA-219ENST00000518824 CTTNBP2Q8WZ74 1663 aa22.39■■□□□ 1.18
VEGFA-219ENST00000518824 DISP1Q96F81 1524 aa22.39■■□□□ 1.17
VEGFA-219ENST00000518824 TTBK1Q5TCY1 1321 aaPredicted RBP22.38■■□□□ 1.17
VEGFA-219ENST00000518824 UGGT2Q9NYU1 1516 aa22.36■■□□□ 1.17
VEGFA-219ENST00000518824 ADCY10Q96PN6 1610 aa22.35■■□□□ 1.17
VEGFA-219ENST00000518824 EEA1Q15075 1411 aa22.33■■□□□ 1.17
VEGFA-219ENST00000518824 PTPRGP23470 1445 aa22.32■■□□□ 1.16
VEGFA-219ENST00000518824 CARMIL2Q6F5E8 1435 aa22.32■■□□□ 1.16
VEGFA-219ENST00000518824 TNIKQ9UKE5 1360 aa22.31■■□□□ 1.16
VEGFA-219ENST00000518824 KIAA0556O60303 1618 aa22.3■■□□□ 1.16
VEGFA-219ENST00000518824 EHMT2Q96KQ7 1210 aa22.2■■□□□ 1.14
VEGFA-219ENST00000518824 KIF21BO75037 1637 aa22.2■■□□□ 1.14
VEGFA-219ENST00000518824 KIF13AQ9H1H9 1805 aa22.17■■□□□ 1.14
VEGFA-219ENST00000518824 UACAQ9BZF9 1416 aa22.16■■□□□ 1.14
VEGFA-219ENST00000518824 NPM1P06748 294 aaKnown RBP eCLIP22.16■■□□□ 1.14
VEGFA-219ENST00000518824 P3H3Q8IVL6 736 aa22.16■■□□□ 1.14
VEGFA-219ENST00000518824 MAPKBP1O60336 1514 aa22.15■■□□□ 1.14
VEGFA-219ENST00000518824 GOLGA3Q08378 1498 aa22.15■■□□□ 1.14
VEGFA-219ENST00000518824 ABCC2Q92887 1545 aa22.14■■□□□ 1.13
VEGFA-219ENST00000518824 UHRF1BP1LA0JNW5 1464 aa22.14■■□□□ 1.13
VEGFA-219ENST00000518824 RANGAP1P46060 587 aaPredicted RBP22.13■■□□□ 1.13
VEGFA-219ENST00000518824 PLB1Q6P1J6 1458 aa22.13■■□□□ 1.13
VEGFA-219ENST00000518824 SAMD9Q5K651 1589 aa22.1■■□□□ 1.13
VEGFA-219ENST00000518824 ABCC10Q5T3U5 1492 aa22.09■■□□□ 1.13
VEGFA-219ENST00000518824 DIP2BQ9P265 1576 aa22.08■■□□□ 1.13
VEGFA-219ENST00000518824 ABCA8O94911 1581 aa22.08■■□□□ 1.12
VEGFA-219ENST00000518824 FAM69CQ0P6D2 419 aa22.06■■□□□ 1.12
VEGFA-219ENST00000518824 ZCCHC11Q5TAX3 1644 aaKnown RBP22.06■■□□□ 1.12
VEGFA-219ENST00000518824 KDM5BQ9UGL1 1544 aa22.06■■□□□ 1.12
VEGFA-219ENST00000518824 ASXL2Q76L83 1435 aa22.04■■□□□ 1.12
VEGFA-219ENST00000518824 UBTFP17480 764 aaKnown RBP22.02■■□□□ 1.12
VEGFA-219ENST00000518824 FHOD3Q2V2M9 1422 aa22.01■■□□□ 1.11
VEGFA-219ENST00000518824 ARID3CA6NKF2 412 aa21.97■■□□□ 1.11
VEGFA-219ENST00000518824 TSPOAP1O95153 1857 aa21.95■■□□□ 1.1
VEGFA-219ENST00000518824 RAPGEF6Q8TEU7 1601 aa21.91■■□□□ 1.1
VEGFA-219ENST00000518824 EFCAB5A4FU69 1503 aa21.9■■□□□ 1.1
VEGFA-219ENST00000518824 EPRSP07814 1512 aaKnown RBP21.9■■□□□ 1.1
VEGFA-219ENST00000518824 ATP10BO94823 1461 aa21.9■■□□□ 1.1
VEGFA-219ENST00000518824 GLI2P10070 1586 aa21.89■■□□□ 1.09
VEGFA-219ENST00000518824 ARHGAP35Q9NRY4 1499 aa21.89■■□□□ 1.09
VEGFA-219ENST00000518824 WDR7Q9Y4E6 1490 aa21.88■■□□□ 1.09
VEGFA-219ENST00000518824 PPRC1Q5VV67 1664 aaKnown RBP21.87■■□□□ 1.09
VEGFA-219ENST00000518824 NUP153P49790 1475 aaKnown RBP21.85■■□□□ 1.09
VEGFA-219ENST00000518824 MAP3K4Q9Y6R4 1608 aa21.83■■□□□ 1.08
VEGFA-219ENST00000518824 KCNH8Q96L42 1107 aa21.82■■□□□ 1.08
VEGFA-219ENST00000518824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.74■■□□□ 1.07
VEGFA-219ENST00000518824 HNRNPUL2Q1KMD3 747 aaKnown RBP21.74■■□□□ 1.07
VEGFA-219ENST00000518824 KDM6BO15054 1643 aa21.73■■□□□ 1.07
VEGFA-219ENST00000518824 CDK13Q14004 1512 aaKnown RBP21.73■■□□□ 1.07
VEGFA-219ENST00000518824 COL17A1Q9UMD9 1497 aaPredicted RBP21.71■■□□□ 1.07
VEGFA-219ENST00000518824 CFAP43Q8NDM7 1665 aa21.7■■□□□ 1.06
VEGFA-219ENST00000518824 FMN1Q68DA7 1419 aa21.69■■□□□ 1.06
VEGFA-219ENST00000518824 CD109Q6YHK3 1445 aa21.69■■□□□ 1.06
VEGFA-219ENST00000518824 ATP1B4Q9UN42 357 aaPredicted RBP21.68■■□□□ 1.06
VEGFA-219ENST00000518824 LRRIQ1Q96JM4 1722 aa21.68■■□□□ 1.06
VEGFA-219ENST00000518824 CLIP1P30622 1438 aa21.66■■□□□ 1.06
VEGFA-219ENST00000518824 LOC105371045A0A1W2PR82 267 aa21.66■■□□□ 1.06
VEGFA-219ENST00000518824 HECW1Q76N89 1606 aa21.65■■□□□ 1.06
VEGFA-219ENST00000518824 ABCA9Q8IUA7 1624 aa21.65■■□□□ 1.06
VEGFA-219ENST00000518824 MAGI3Q5TCQ9 1506 aa21.65■■□□□ 1.06
VEGFA-219ENST00000518824 TEX14Q8IWB6 1497 aa21.64■■□□□ 1.05
VEGFA-219ENST00000518824 PCF11O94913 1555 aaKnown RBP21.63■■□□□ 1.05
VEGFA-219ENST00000518824 PLEKHD1A6NEE1 506 aa21.61■■□□□ 1.05
VEGFA-219ENST00000518824 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.57■■□□□ 1.042e-6■■□□□ 12.9
VEGFA-219ENST00000518824 CASKIN1Q8WXD9 1431 aa21.56■■□□□ 1.04
VEGFA-219ENST00000518824 TTC37Q6PGP7 1564 aa21.56■■□□□ 1.04
VEGFA-219ENST00000518824 CEP162Q5TB80 1403 aa21.55■■□□□ 1.04
VEGFA-219ENST00000518824 KIF14Q15058 1648 aa21.51■■□□□ 1.03
VEGFA-219ENST00000518824 FYCO1Q9BQS8 1478 aa21.48■■□□□ 1.03
VEGFA-219ENST00000518824 TROQ12816 1431 aaPredicted RBP21.46■■□□□ 1.03
VEGFA-219ENST00000518824 ARAP3Q8WWN8 1544 aa21.46■■□□□ 1.03
VEGFA-219ENST00000518824 CCDC18Q5T9S5 1454 aa21.44■■□□□ 1.02
VEGFA-219ENST00000518824 NEO1Q92859 1461 aa21.44■■□□□ 1.02
VEGFA-219ENST00000518824 CDK11AQ9UQ88 783 aaPredicted RBP21.43■■□□□ 1.02
VEGFA-219ENST00000518824 RAPGEF3O95398 923 aa21.42■■□□□ 1.02
VEGFA-219ENST00000518824 FRMPD1Q5SYB0 1578 aa21.41■■□□□ 1.02
VEGFA-219ENST00000518824 FANCAO15360 1455 aa21.41■■□□□ 1.02
VEGFA-219ENST00000518824 PLCH2O75038 1416 aa21.39■■□□□ 1.02
VEGFA-219ENST00000518824 AKNAQ7Z591 1439 aa21.39■■□□□ 1.02
VEGFA-219ENST00000518824 KDM4FA0A1W2PPD8 638 aa21.38■■□□□ 1.01
VEGFA-219ENST00000518824 MYO5CQ9NQX4 1742 aa21.38■■□□□ 1.01
VEGFA-219ENST00000518824 PHLDB1Q86UU1 1377 aa21.37■■□□□ 1.01
VEGFA-219ENST00000518824 CFAP74Q9C0B2 1584 aa21.34■■□□□ 1.01
VEGFA-219ENST00000518824 RICTORQ6R327 1708 aa21.34■■□□□ 1.01
VEGFA-219ENST00000518824 CDC42BPBQ9Y5S2 1711 aa21.33■■□□□ 1.01
VEGFA-219ENST00000518824 DENND4BO75064 1496 aaPredicted RBP21.32■■□□□ 1
VEGFA-219ENST00000518824 AEBP2Q6ZN18 517 aaPredicted RBP21.31■■□□□ 1
VEGFA-219ENST00000518824 ARHGAP5Q13017 1502 aa21.29■■□□□ 1
VEGFA-219ENST00000518824 ADGRL1O94910 1474 aa21.29■■□□□ 1
VEGFA-219ENST00000518824 CDC42BPAQ5VT25 1732 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms