RNA–Protein interactions for RNA: ENST00000517813.1

DENND3-203, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 4,487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-203ENST00000517813 EIF4G2P78344 907 aaKnown RBP eCLIP17.9■□□□□ 0.46
DENND3-203ENST00000517813 TSPY4P0CV99 314 aa17.88■□□□□ 0.45
DENND3-203ENST00000517813 TSPY10P0CW01 314 aa17.88■□□□□ 0.45
DENND3-203ENST00000517813 MRS2Q9HD23 443 aa17.88■□□□□ 0.45
DENND3-203ENST00000517813 FHAD1B1AJZ9 1412 aa17.87■□□□□ 0.45
DENND3-203ENST00000517813 ATAD2BQ9ULI0 1458 aa17.84■□□□□ 0.45
DENND3-203ENST00000517813 RAPGEF2Q9Y4G8 1499 aa17.83■□□□□ 0.45
DENND3-203ENST00000517813 KDM2AQ9Y2K7 1162 aa17.83■□□□□ 0.45
DENND3-203ENST00000517813 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.82■□□□□ 0.44
DENND3-203ENST00000517813 TMC1Q8TDI8 760 aa17.81■□□□□ 0.44
DENND3-203ENST00000517813 IRX6P78412 446 aaPredicted RBP17.8■□□□□ 0.44
DENND3-203ENST00000517813 SALL2Q9Y467 1007 aaPredicted RBP17.79■□□□□ 0.44
DENND3-203ENST00000517813 SETD5Q9C0A6 1442 aa17.75■□□□□ 0.43
DENND3-203ENST00000517813 CFDP1Q9UEE9 299 aaPredicted RBP17.74■□□□□ 0.43
DENND3-203ENST00000517813 PLEKHD1A6NEE1 506 aa17.74■□□□□ 0.43
DENND3-203ENST00000517813 ANP32AP39687 249 aaKnown RBP17.74■□□□□ 0.43
DENND3-203ENST00000517813 RAB3GAP2Q9H2M9 1393 aa17.72■□□□□ 0.43
DENND3-203ENST00000517813 CANXP27824 592 aaKnown RBP17.72■□□□□ 0.43
DENND3-203ENST00000517813 TIMELESSQ9UNS1 1208 aa17.71■□□□□ 0.43
DENND3-203ENST00000517813 CHGAP10645 457 aaKnown RBP17.69■□□□□ 0.42
DENND3-203ENST00000517813 CCDC136Q96JN2 1154 aa17.69■□□□□ 0.42
DENND3-203ENST00000517813 NPM2Q86SE8 214 aaKnown RBP17.68■□□□□ 0.42
DENND3-203ENST00000517813 ARHGAP35Q9NRY4 1499 aa17.67■□□□□ 0.42
DENND3-203ENST00000517813 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
DENND3-203ENST00000517813 SUPT16HQ9Y5B9 1047 aaKnown RBP17.66■□□□□ 0.42
DENND3-203ENST00000517813 TDRD9Q8NDG6 1382 aaKnown RBP17.65■□□□□ 0.42
DENND3-203ENST00000517813 EIF4G1Q04637 1599 aaKnown RBP17.63■□□□□ 0.41
DENND3-203ENST00000517813 RGL3Q3MIN7 710 aa17.63■□□□□ 0.41
DENND3-203ENST00000517813 KCNH8Q96L42 1107 aa17.62■□□□□ 0.41
DENND3-203ENST00000517813 SENP3-EIF4A1A0A087X0R7 540 aa17.6■□□□□ 0.41
DENND3-203ENST00000517813 DHX57Q6P158 1386 aaKnown RBP17.6■□□□□ 0.41
DENND3-203ENST00000517813 FHOD3Q2V2M9 1422 aa17.58■□□□□ 0.4
DENND3-203ENST00000517813 FMN1Q68DA7 1419 aa17.58■□□□□ 0.4
DENND3-203ENST00000517813 CARD11Q9BXL7 1154 aa17.57■□□□□ 0.4
DENND3-203ENST00000517813 NPM1P06748 294 aaKnown RBP eCLIP17.57■□□□□ 0.4
DENND3-203ENST00000517813 NEFMP07197 916 aa17.55■□□□□ 0.4
DENND3-203ENST00000517813 PPP1R15AO75807 674 aaPredicted RBP17.55■□□□□ 0.4
DENND3-203ENST00000517813 WDR43Q15061 677 aaKnown RBP eCLIP17.54■□□□□ 0.4
DENND3-203ENST00000517813 CCER2I3L3R5 266 aa17.54■□□□□ 0.4
DENND3-203ENST00000517813 FOXD1Q16676 465 aa17.52■□□□□ 0.39
DENND3-203ENST00000517813 HSPA5P11021 654 aaKnown RBP17.51■□□□□ 0.39
DENND3-203ENST00000517813 PDS5BQ9NTI5 1447 aa17.51■□□□□ 0.39
DENND3-203ENST00000517813 BCL11AQ9H165 835 aa17.51■□□□□ 0.39
DENND3-203ENST00000517813 ZBTB47Q9UFB7 747 aaPredicted RBP17.49■□□□□ 0.39
DENND3-203ENST00000517813 ERCC6Q03468 1493 aa17.48■□□□□ 0.39
DENND3-203ENST00000517813 IGF1RP08069 1367 aa17.46■□□□□ 0.39
DENND3-203ENST00000517813 MPHOSPH9Q99550 1183 aa17.45■□□□□ 0.38
DENND3-203ENST00000517813 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.45■□□□□ 0.38
DENND3-203ENST00000517813 STAG3Q9UJ98 1225 aa17.45■□□□□ 0.38
DENND3-203ENST00000517813 KIF21BO75037 1637 aa17.44■□□□□ 0.38
DENND3-203ENST00000517813 NBR1Q14596 966 aa17.42■□□□□ 0.38
DENND3-203ENST00000517813 DCAF11Q8TEB1 546 aa17.42■□□□□ 0.38
DENND3-203ENST00000517813 FANCD2Q9BXW9 1451 aa17.41■□□□□ 0.38
DENND3-203ENST00000517813 PPP4R2Q9NY27 417 aa17.41■□□□□ 0.38
DENND3-203ENST00000517813 PKD2Q13563 968 aa17.41■□□□□ 0.38
DENND3-203ENST00000517813 SYNJ1O43426 1573 aa17.4■□□□□ 0.38
DENND3-203ENST00000517813 NCAPD3P42695 1498 aa17.38■□□□□ 0.37
DENND3-203ENST00000517813 L3MBTL2Q969R5 705 aa17.38■□□□□ 0.37
DENND3-203ENST00000517813 FGD5Q6ZNL6 1462 aa17.38■□□□□ 0.37
DENND3-203ENST00000517813 ESF1Q9H501 851 aaKnown RBP17.37■□□□□ 0.37
DENND3-203ENST00000517813 KNSTRNQ9Y448 316 aa17.37■□□□□ 0.37
DENND3-203ENST00000517813 B4GALNT3Q6L9W6 998 aa17.36■□□□□ 0.37
DENND3-203ENST00000517813 SLC24A1O60721 1099 aa17.36■□□□□ 0.37
DENND3-203ENST00000517813 ANP32EQ9BTT0 268 aa17.36■□□□□ 0.37
DENND3-203ENST00000517813 CDCA8Q53HL2 280 aa17.33■□□□□ 0.37
DENND3-203ENST00000517813 SENP3Q9H4L4 574 aaPredicted RBP17.33■□□□□ 0.36
DENND3-203ENST00000517813 UPF2Q9HAU5 1272 aaKnown RBP17.31■□□□□ 0.36
DENND3-203ENST00000517813 ARAP1Q96P48 1450 aa17.31■□□□□ 0.36
DENND3-203ENST00000517813 CC2D1BQ5T0F9 858 aaKnown RBP17.31■□□□□ 0.36
DENND3-203ENST00000517813 CARMIL2Q6F5E8 1435 aa17.3■□□□□ 0.36
DENND3-203ENST00000517813 RAD54L2Q9Y4B4 1467 aa17.29■□□□□ 0.36
DENND3-203ENST00000517813 PHLDB1Q86UU1 1377 aa17.29■□□□□ 0.36
DENND3-203ENST00000517813 NUP155O75694 1391 aa17.29■□□□□ 0.36
DENND3-203ENST00000517813 ERICH3Q5RHP9 1530 aa17.26■□□□□ 0.35
DENND3-203ENST00000517813 ANKRD30AQ9BXX3 1397 aa17.26■□□□□ 0.35
DENND3-203ENST00000517813 PRXQ9BXM0 1461 aa17.25■□□□□ 0.35
DENND3-203ENST00000517813 CCDC18Q5T9S5 1454 aa17.25■□□□□ 0.35
DENND3-203ENST00000517813 RBM19Q9Y4C8 960 aaKnown RBP17.25■□□□□ 0.35
DENND3-203ENST00000517813 TMF1P82094 1093 aa17.25■□□□□ 0.35
DENND3-203ENST00000517813 CFTRP13569 1480 aa17.23■□□□□ 0.35
DENND3-203ENST00000517813 LRRC9Q6ZRR7 1453 aa17.23■□□□□ 0.35
DENND3-203ENST00000517813 TSHZ2Q9NRE2 1034 aa17.23■□□□□ 0.35
DENND3-203ENST00000517813 PLPPR3Q6T4P5 718 aa17.2■□□□□ 0.34
DENND3-203ENST00000517813 JPH4Q96JJ6 628 aa17.2■□□□□ 0.34
DENND3-203ENST00000517813 FGD6Q6ZV73 1430 aa17.2■□□□□ 0.34
DENND3-203ENST00000517813 RRBP1Q9P2E9 1410 aaKnown RBP17.2■□□□□ 0.34
DENND3-203ENST00000517813 GAPVD1Q14C86 1478 aa17.2■□□□□ 0.34
DENND3-203ENST00000517813 NEUROD2Q15784 382 aa17.19■□□□□ 0.34
DENND3-203ENST00000517813 TOP2BQ02880 1626 aa17.19■□□□□ 0.34
DENND3-203ENST00000517813 HSP90AA1P07900 732 aaKnown RBP17.19■□□□□ 0.34
DENND3-203ENST00000517813 HNRNPMP52272 730 aaKnown RBP eCLIP17.18■□□□□ 0.34
DENND3-203ENST00000517813 CFAP53Q96M91 514 aa17.17■□□□□ 0.34
DENND3-203ENST00000517813 ERICH6BQ5W0A0 696 aa17.16■□□□□ 0.34
DENND3-203ENST00000517813 ROCK2O75116 1388 aaKnown RBP17.16■□□□□ 0.34
DENND3-203ENST00000517813 CUX1P39880 1505 aa17.15■□□□□ 0.34
DENND3-203ENST00000517813 TNNT2P45379 298 aaPredicted RBP17.15■□□□□ 0.34
DENND3-203ENST00000517813 KTN1Q86UP2 1357 aaKnown RBP17.13■□□□□ 0.33
DENND3-203ENST00000517813 MYOM3Q5VTT5 1437 aa17.13■□□□□ 0.33
DENND3-203ENST00000517813 DDRGK1Q96HY6 314 aa17.13■□□□□ 0.33
DENND3-203ENST00000517813 CASKIN1Q8WXD9 1431 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms