RNA–Protein interactions for RNA: ENST00000517647.1

TRIM55-205, Transcript of tripartite motif containing 55, humanhuman

TSL 2

Gene TRIM55, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-205ENST00000517647 CUL7Q14999 1698 aa18.82■□□□□ 0.6
TRIM55-205ENST00000517647 CEP170Q5SW79 1584 aa18.81■□□□□ 0.6
TRIM55-205ENST00000517647 ARAP1Q96P48 1450 aa18.77■□□□□ 0.6
TRIM55-205ENST00000517647 SHROOM2Q13796 1616 aa18.75■□□□□ 0.59
TRIM55-205ENST00000517647 CARMIL1Q5VZK9 1371 aa18.74■□□□□ 0.59
TRIM55-205ENST00000517647 TRIM41Q8WV44 630 aa18.72■□□□□ 0.59
TRIM55-205ENST00000517647 KIAA0586Q9BVV6 1533 aa18.69■□□□□ 0.58
TRIM55-205ENST00000517647 CYB5RLQ6IPT4 315 aa18.69■□□□□ 0.58
TRIM55-205ENST00000517647 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
TRIM55-205ENST00000517647 RUSC2Q8N2Y8 1516 aa18.68■□□□□ 0.58
TRIM55-205ENST00000517647 JPH4Q96JJ6 628 aa18.66■□□□□ 0.58
TRIM55-205ENST00000517647 ADRA2BP18089 450 aa18.63■□□□□ 0.57
TRIM55-205ENST00000517647 RAPGEF2Q9Y4G8 1499 aa18.62■□□□□ 0.57
TRIM55-205ENST00000517647 PRG4Q92954 1404 aaPredicted RBP18.6■□□□□ 0.57
TRIM55-205ENST00000517647 ERCC6L2Q5T890 1561 aa18.59■□□□□ 0.57
TRIM55-205ENST00000517647 PRXQ9BXM0 1461 aa18.58■□□□□ 0.57
TRIM55-205ENST00000517647 EEA1Q15075 1411 aa18.58■□□□□ 0.57
TRIM55-205ENST00000517647 IQGAP2Q13576 1575 aa18.51■□□□□ 0.55
TRIM55-205ENST00000517647 CSRNP3Q8WYN3 585 aa18.49■□□□□ 0.55
TRIM55-205ENST00000517647 UGGT2Q9NYU1 1516 aa18.48■□□□□ 0.55
TRIM55-205ENST00000517647 CARMIL2Q6F5E8 1435 aa18.47■□□□□ 0.55
TRIM55-205ENST00000517647 TNIKQ9UKE5 1360 aa18.42■□□□□ 0.54
TRIM55-205ENST00000517647 DISP1Q96F81 1524 aa18.41■□□□□ 0.54
TRIM55-205ENST00000517647 CTTNBP2Q8WZ74 1663 aa18.39■□□□□ 0.53
TRIM55-205ENST00000517647 PTPRGP23470 1445 aa18.39■□□□□ 0.53
TRIM55-205ENST00000517647 GOLGA3Q08378 1498 aa18.35■□□□□ 0.53
TRIM55-205ENST00000517647 KIAA0556O60303 1618 aa18.34■□□□□ 0.53
TRIM55-205ENST00000517647 UHRF1BP1LA0JNW5 1464 aa18.33■□□□□ 0.53
TRIM55-205ENST00000517647 ADCY10Q96PN6 1610 aa18.33■□□□□ 0.52
TRIM55-205ENST00000517647 KIF21BO75037 1637 aa18.32■□□□□ 0.52
TRIM55-205ENST00000517647 MAPKBP1O60336 1514 aa18.32■□□□□ 0.52
TRIM55-205ENST00000517647 NPM1P06748 294 aaKnown RBP eCLIP18.28■□□□□ 0.52
TRIM55-205ENST00000517647 TRHP20396 242 aaPredicted RBP18.28■□□□□ 0.52
TRIM55-205ENST00000517647 UACAQ9BZF9 1416 aa18.28■□□□□ 0.52
TRIM55-205ENST00000517647 ABCC2Q92887 1545 aa18.27■□□□□ 0.51
TRIM55-205ENST00000517647 KDM5BQ9UGL1 1544 aa18.23■□□□□ 0.51
TRIM55-205ENST00000517647 ABCC10Q5T3U5 1492 aa18.22■□□□□ 0.51
TRIM55-205ENST00000517647 SAMD9Q5K651 1589 aa18.21■□□□□ 0.51
TRIM55-205ENST00000517647 FAM9AQ8IZU1 332 aaPredicted RBP18.19■□□□□ 0.5
TRIM55-205ENST00000517647 ABCA8O94911 1581 aa18.18■□□□□ 0.5
TRIM55-205ENST00000517647 PLB1Q6P1J6 1458 aa18.17■□□□□ 0.5
TRIM55-205ENST00000517647 KIF13AQ9H1H9 1805 aa18.16■□□□□ 0.5
TRIM55-205ENST00000517647 EFCAB5A4FU69 1503 aa18.14■□□□□ 0.49
TRIM55-205ENST00000517647 DIP2BQ9P265 1576 aa18.14■□□□□ 0.49
TRIM55-205ENST00000517647 ASXL2Q76L83 1435 aa18.12■□□□□ 0.49
TRIM55-205ENST00000517647 GLI2P10070 1586 aa18.1■□□□□ 0.49
TRIM55-205ENST00000517647 FAM69CQ0P6D2 419 aa18.09■□□□□ 0.49
TRIM55-205ENST00000517647 ZCCHC11Q5TAX3 1644 aaKnown RBP18.09■□□□□ 0.49
TRIM55-205ENST00000517647 TTBK1Q5TCY1 1321 aaPredicted RBP18.08■□□□□ 0.49
TRIM55-205ENST00000517647 UBTFP17480 764 aaKnown RBP18.05■□□□□ 0.48
TRIM55-205ENST00000517647 EPRSP07814 1512 aaKnown RBP18.03■□□□□ 0.48
TRIM55-205ENST00000517647 WDR7Q9Y4E6 1490 aa18.03■□□□□ 0.48
TRIM55-205ENST00000517647 P3H3Q8IVL6 736 aa18.02■□□□□ 0.48
TRIM55-205ENST00000517647 RAPGEF6Q8TEU7 1601 aa18.01■□□□□ 0.47
TRIM55-205ENST00000517647 ATP10BO94823 1461 aa18.01■□□□□ 0.47
TRIM55-205ENST00000517647 FHOD3Q2V2M9 1422 aa18.01■□□□□ 0.47
TRIM55-205ENST00000517647 ARHGAP35Q9NRY4 1499 aa17.99■□□□□ 0.47
TRIM55-205ENST00000517647 FMN1Q68DA7 1419 aa17.98■□□□□ 0.47
TRIM55-205ENST00000517647 NUP153P49790 1475 aaKnown RBP17.97■□□□□ 0.47
TRIM55-205ENST00000517647 MAP3K4Q9Y6R4 1608 aa17.95■□□□□ 0.46
TRIM55-205ENST00000517647 PPRC1Q5VV67 1664 aaKnown RBP17.92■□□□□ 0.46
TRIM55-205ENST00000517647 MAGI3Q5TCQ9 1506 aa17.91■□□□□ 0.46
TRIM55-205ENST00000517647 TEX14Q8IWB6 1497 aa17.9■□□□□ 0.46
TRIM55-205ENST00000517647 CFAP43Q8NDM7 1665 aa17.9■□□□□ 0.46
TRIM55-205ENST00000517647 RANGAP1P46060 587 aaPredicted RBP17.89■□□□□ 0.45
TRIM55-205ENST00000517647 CD109Q6YHK3 1445 aa17.86■□□□□ 0.45
TRIM55-205ENST00000517647 TSPOAP1O95153 1857 aa17.86■□□□□ 0.45
TRIM55-205ENST00000517647 ABCA9Q8IUA7 1624 aa17.85■□□□□ 0.45
TRIM55-205ENST00000517647 HECW1Q76N89 1606 aa17.84■□□□□ 0.45
TRIM55-205ENST00000517647 KDM6BO15054 1643 aa17.83■□□□□ 0.45
TRIM55-205ENST00000517647 PHLDB1Q86UU1 1377 aa17.83■□□□□ 0.45
TRIM55-205ENST00000517647 PLEKHD1A6NEE1 506 aa17.83■□□□□ 0.44
TRIM55-205ENST00000517647 EHMT2Q96KQ7 1210 aa17.83■□□□□ 0.44
TRIM55-205ENST00000517647 CLIP1P30622 1438 aa17.82■□□□□ 0.44
TRIM55-205ENST00000517647 KCNH8Q96L42 1107 aa17.82■□□□□ 0.44
TRIM55-205ENST00000517647 CASKIN1Q8WXD9 1431 aa17.81■□□□□ 0.44
TRIM55-205ENST00000517647 ARID3CA6NKF2 412 aa17.78■□□□□ 0.44
TRIM55-205ENST00000517647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.77■□□□□ 0.44
TRIM55-205ENST00000517647 HNRNPUL2Q1KMD3 747 aaKnown RBP17.77■□□□□ 0.44
TRIM55-205ENST00000517647 CDK11AQ9UQ88 783 aaPredicted RBP17.77■□□□□ 0.44
TRIM55-205ENST00000517647 COL17A1Q9UMD9 1497 aaPredicted RBP17.76■□□□□ 0.43
TRIM55-205ENST00000517647 CDK13Q14004 1512 aaKnown RBP17.76■□□□□ 0.43
TRIM55-205ENST00000517647 ARAP3Q8WWN8 1544 aa17.76■□□□□ 0.43
TRIM55-205ENST00000517647 CCDC18Q5T9S5 1454 aa17.75■□□□□ 0.43
TRIM55-205ENST00000517647 FYCO1Q9BQS8 1478 aa17.75■□□□□ 0.43
TRIM55-205ENST00000517647 NEO1Q92859 1461 aa17.75■□□□□ 0.43
TRIM55-205ENST00000517647 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.72■□□□□ 0.43
TRIM55-205ENST00000517647 TROQ12816 1431 aaPredicted RBP17.72■□□□□ 0.43
TRIM55-205ENST00000517647 CEP162Q5TB80 1403 aa17.72■□□□□ 0.43
TRIM55-205ENST00000517647 PCF11O94913 1555 aaKnown RBP17.71■□□□□ 0.43
TRIM55-205ENST00000517647 LRRIQ1Q96JM4 1722 aa17.69■□□□□ 0.42
TRIM55-205ENST00000517647 PLCH2O75038 1416 aa17.67■□□□□ 0.42
TRIM55-205ENST00000517647 ATP1B4Q9UN42 357 aaPredicted RBP17.65■□□□□ 0.42
TRIM55-205ENST00000517647 TTC37Q6PGP7 1564 aa17.65■□□□□ 0.42
TRIM55-205ENST00000517647 CFAP74Q9C0B2 1584 aa17.65■□□□□ 0.42
TRIM55-205ENST00000517647 KIF14Q15058 1648 aa17.63■□□□□ 0.41
TRIM55-205ENST00000517647 FANCAO15360 1455 aa17.63■□□□□ 0.41
TRIM55-205ENST00000517647 LOC105371045A0A1W2PR82 267 aa17.62■□□□□ 0.41
TRIM55-205ENST00000517647 AKNAQ7Z591 1439 aa17.61■□□□□ 0.41
TRIM55-205ENST00000517647 DENND4BO75064 1496 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms