RNA–Protein interactions for RNA: ENST00000516882.1

SCARNA18.2-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 84 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.2-201ENST00000516882 ERCC6L2Q5T890 1561 aa12.04□□□□□ -0.48
SCARNA18.2-201ENST00000516882 PRG4Q92954 1404 aaPredicted RBP12.03□□□□□ -0.48
SCARNA18.2-201ENST00000516882 KIAA0586Q9BVV6 1533 aa12.03□□□□□ -0.48
SCARNA18.2-201ENST00000516882 TRHP20396 242 aaPredicted RBP12.01□□□□□ -0.49
SCARNA18.2-201ENST00000516882 RAPGEF2Q9Y4G8 1499 aa12.01□□□□□ -0.49
SCARNA18.2-201ENST00000516882 IQGAP2Q13576 1575 aa11.99□□□□□ -0.49
SCARNA18.2-201ENST00000516882 CTTNBP2Q8WZ74 1663 aa11.99□□□□□ -0.49
SCARNA18.2-201ENST00000516882 CARMIL2Q6F5E8 1435 aa11.95□□□□□ -0.5
SCARNA18.2-201ENST00000516882 NPM1P06748 294 aaKnown RBP eCLIP11.93□□□□□ -0.5
SCARNA18.2-201ENST00000516882 EEA1Q15075 1411 aa11.91□□□□□ -0.5
SCARNA18.2-201ENST00000516882 TTBK1Q5TCY1 1321 aaPredicted RBP11.89□□□□□ -0.51
SCARNA18.2-201ENST00000516882 CSRNP3Q8WYN3 585 aa11.89□□□□□ -0.51
SCARNA18.2-201ENST00000516882 PRXQ9BXM0 1461 aa11.89□□□□□ -0.51
SCARNA18.2-201ENST00000516882 PTPRGP23470 1445 aa11.88□□□□□ -0.51
SCARNA18.2-201ENST00000516882 UGGT2Q9NYU1 1516 aa11.88□□□□□ -0.51
SCARNA18.2-201ENST00000516882 ADCY10Q96PN6 1610 aa11.88□□□□□ -0.51
SCARNA18.2-201ENST00000516882 TNIKQ9UKE5 1360 aa11.88□□□□□ -0.51
SCARNA18.2-201ENST00000516882 KIF13AQ9H1H9 1805 aa11.87□□□□□ -0.51
SCARNA18.2-201ENST00000516882 KIAA0556O60303 1618 aa11.86□□□□□ -0.51
SCARNA18.2-201ENST00000516882 GOLGA3Q08378 1498 aa11.85□□□□□ -0.51
SCARNA18.2-201ENST00000516882 FAM9AQ8IZU1 332 aaPredicted RBP11.85□□□□□ -0.51
SCARNA18.2-201ENST00000516882 DISP1Q96F81 1524 aa11.85□□□□□ -0.51
SCARNA18.2-201ENST00000516882 CHIC1Q5VXU3 224 aa11.83□□□□□ -0.52
SCARNA18.2-201ENST00000516882 MAPKBP1O60336 1514 aa11.82□□□□□ -0.52
SCARNA18.2-201ENST00000516882 UACAQ9BZF9 1416 aa11.8□□□□□ -0.52
SCARNA18.2-201ENST00000516882 KIF21BO75037 1637 aa11.8□□□□□ -0.52
SCARNA18.2-201ENST00000516882 TSPOAP1O95153 1857 aa11.8□□□□□ -0.52
SCARNA18.2-201ENST00000516882 UHRF1BP1LA0JNW5 1464 aa11.79□□□□□ -0.52
SCARNA18.2-201ENST00000516882 ABCC2Q92887 1545 aa11.79□□□□□ -0.52
SCARNA18.2-201ENST00000516882 FAM69CQ0P6D2 419 aa11.77□□□□□ -0.53
SCARNA18.2-201ENST00000516882 ABCC10Q5T3U5 1492 aa11.76□□□□□ -0.53
SCARNA18.2-201ENST00000516882 DIP2BQ9P265 1576 aa11.76□□□□□ -0.53
SCARNA18.2-201ENST00000516882 ZCCHC11Q5TAX3 1644 aaKnown RBP11.75□□□□□ -0.53
SCARNA18.2-201ENST00000516882 PLB1Q6P1J6 1458 aa11.74□□□□□ -0.53
SCARNA18.2-201ENST00000516882 SAMD9Q5K651 1589 aa11.74□□□□□ -0.53
SCARNA18.2-201ENST00000516882 RANGAP1P46060 587 aaPredicted RBP11.73□□□□□ -0.53
SCARNA18.2-201ENST00000516882 P3H3Q8IVL6 736 aa11.73□□□□□ -0.53
SCARNA18.2-201ENST00000516882 KDM5BQ9UGL1 1544 aa11.73□□□□□ -0.53
SCARNA18.2-201ENST00000516882 ASXL2Q76L83 1435 aa11.72□□□□□ -0.53
SCARNA18.2-201ENST00000516882 UBTFP17480 764 aaKnown RBP11.72□□□□□ -0.53
SCARNA18.2-201ENST00000516882 ABCA8O94911 1581 aa11.71□□□□□ -0.53
SCARNA18.2-201ENST00000516882 EHMT2Q96KQ7 1210 aa11.7□□□□□ -0.54
SCARNA18.2-201ENST00000516882 EFCAB5A4FU69 1503 aa11.69□□□□□ -0.54
SCARNA18.2-201ENST00000516882 RAPGEF6Q8TEU7 1601 aa11.68□□□□□ -0.54
SCARNA18.2-201ENST00000516882 GLI2P10070 1586 aa11.68□□□□□ -0.54
SCARNA18.2-201ENST00000516882 WDR7Q9Y4E6 1490 aa11.65□□□□□ -0.54
SCARNA18.2-201ENST00000516882 KDM6BO15054 1643 aa11.65□□□□□ -0.54
SCARNA18.2-201ENST00000516882 EPRSP07814 1512 aaKnown RBP11.65□□□□□ -0.55
SCARNA18.2-201ENST00000516882 MAP3K4Q9Y6R4 1608 aa11.64□□□□□ -0.55
SCARNA18.2-201ENST00000516882 FHOD3Q2V2M9 1422 aa11.64□□□□□ -0.55
SCARNA18.2-201ENST00000516882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.64□□□□□ -0.55
SCARNA18.2-201ENST00000516882 HNRNPUL2Q1KMD3 747 aaKnown RBP11.64□□□□□ -0.55
SCARNA18.2-201ENST00000516882 CFAP43Q8NDM7 1665 aa11.64□□□□□ -0.55
SCARNA18.2-201ENST00000516882 PPRC1Q5VV67 1664 aaKnown RBP11.62□□□□□ -0.55
SCARNA18.2-201ENST00000516882 ARID3CA6NKF2 412 aa11.62□□□□□ -0.55
SCARNA18.2-201ENST00000516882 KCNH8Q96L42 1107 aa11.62□□□□□ -0.55
SCARNA18.2-201ENST00000516882 TEX14Q8IWB6 1497 aa11.62□□□□□ -0.55
SCARNA18.2-201ENST00000516882 ATP10BO94823 1461 aa11.6□□□□□ -0.55
SCARNA18.2-201ENST00000516882 FMN1Q68DA7 1419 aa11.59□□□□□ -0.55
SCARNA18.2-201ENST00000516882 CD109Q6YHK3 1445 aa11.57□□□□□ -0.56
SCARNA18.2-201ENST00000516882 NUP153P49790 1475 aaKnown RBP11.57□□□□□ -0.56
SCARNA18.2-201ENST00000516882 ATP1B4Q9UN42 357 aaPredicted RBP11.56□□□□□ -0.56
SCARNA18.2-201ENST00000516882 HECW1Q76N89 1606 aa11.56□□□□□ -0.56
SCARNA18.2-201ENST00000516882 ARHGAP35Q9NRY4 1499 aa11.56□□□□□ -0.56
SCARNA18.2-201ENST00000516882 PLEKHD1A6NEE1 506 aa11.55□□□□□ -0.56
SCARNA18.2-201ENST00000516882 ABCA9Q8IUA7 1624 aa11.54□□□□□ -0.56
SCARNA18.2-201ENST00000516882 MAGI3Q5TCQ9 1506 aa11.53□□□□□ -0.56
SCARNA18.2-201ENST00000516882 AEBP2Q6ZN18 517 aaPredicted RBP11.52□□□□□ -0.57
SCARNA18.2-201ENST00000516882 CDK11AQ9UQ88 783 aaPredicted RBP11.51□□□□□ -0.57
SCARNA18.2-201ENST00000516882 LRRIQ1Q96JM4 1722 aa11.49□□□□□ -0.57
SCARNA18.2-201ENST00000516882 CLIP1P30622 1438 aa11.49□□□□□ -0.57
SCARNA18.2-201ENST00000516882 CDK13Q14004 1512 aaKnown RBP11.49□□□□□ -0.57
SCARNA18.2-201ENST00000516882 CFAP74Q9C0B2 1584 aa11.48□□□□□ -0.57
SCARNA18.2-201ENST00000516882 MYO5CQ9NQX4 1742 aa11.47□□□□□ -0.57
SCARNA18.2-201ENST00000516882 PHLDB1Q86UU1 1377 aa11.47□□□□□ -0.57
SCARNA18.2-201ENST00000516882 PCF11O94913 1555 aaKnown RBP11.46□□□□□ -0.57
SCARNA18.2-201ENST00000516882 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.45□□□□□ -0.58
SCARNA18.2-201ENST00000516882 CCDC18Q5T9S5 1454 aa11.45□□□□□ -0.58
SCARNA18.2-201ENST00000516882 COL17A1Q9UMD9 1497 aaPredicted RBP11.45□□□□□ -0.58
SCARNA18.2-201ENST00000516882 KIF14Q15058 1648 aa11.45□□□□□ -0.58
SCARNA18.2-201ENST00000516882 ARAP3Q8WWN8 1544 aa11.45□□□□□ -0.58
SCARNA18.2-201ENST00000516882 NEO1Q92859 1461 aa11.44□□□□□ -0.58
SCARNA18.2-201ENST00000516882 CASKIN1Q8WXD9 1431 aa11.44□□□□□ -0.58
SCARNA18.2-201ENST00000516882 TTC37Q6PGP7 1564 aa11.44□□□□□ -0.58
SCARNA18.2-201ENST00000516882 FYCO1Q9BQS8 1478 aa11.43□□□□□ -0.58
SCARNA18.2-201ENST00000516882 FANCAO15360 1455 aa11.41□□□□□ -0.58
SCARNA18.2-201ENST00000516882 TROQ12816 1431 aaPredicted RBP11.41□□□□□ -0.58
SCARNA18.2-201ENST00000516882 CEP162Q5TB80 1403 aa11.4□□□□□ -0.58
SCARNA18.2-201ENST00000516882 RICTORQ6R327 1708 aa11.39□□□□□ -0.59
SCARNA18.2-201ENST00000516882 AKNAQ7Z591 1439 aa11.39□□□□□ -0.59
SCARNA18.2-201ENST00000516882 DENND4BO75064 1496 aaPredicted RBP11.38□□□□□ -0.59
SCARNA18.2-201ENST00000516882 CDC42BPBQ9Y5S2 1711 aa11.38□□□□□ -0.59
SCARNA18.2-201ENST00000516882 PLCH2O75038 1416 aa11.37□□□□□ -0.59
SCARNA18.2-201ENST00000516882 RAPGEF3O95398 923 aa11.37□□□□□ -0.59
SCARNA18.2-201ENST00000516882 ARHGAP5Q13017 1502 aa11.36□□□□□ -0.59
SCARNA18.2-201ENST00000516882 CDC42BPAQ5VT25 1732 aa11.36□□□□□ -0.59
SCARNA18.2-201ENST00000516882 EFCAB2Q5VUJ9 269 aa11.36□□□□□ -0.59
SCARNA18.2-201ENST00000516882 LOC105371045A0A1W2PR82 267 aa11.35□□□□□ -0.59
SCARNA18.2-201ENST00000516882 ADGRL1O94910 1474 aa11.35□□□□□ -0.59
SCARNA18.2-201ENST00000516882 PREX2Q70Z35 1606 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms