RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 PRG4Q92954 1404 aaPredicted RBP18.91■□□□□ 0.62
SCARNA16.1-201ENST00000516133 RUSC2Q8N2Y8 1516 aa18.9■□□□□ 0.62
SCARNA16.1-201ENST00000516133 ERCC6L2Q5T890 1561 aa18.87■□□□□ 0.61
SCARNA16.1-201ENST00000516133 RAPGEF2Q9Y4G8 1499 aa18.86■□□□□ 0.61
SCARNA16.1-201ENST00000516133 TRHP20396 242 aaPredicted RBP18.8■□□□□ 0.6
SCARNA16.1-201ENST00000516133 CSRNP3Q8WYN3 585 aa18.78■□□□□ 0.6
SCARNA16.1-201ENST00000516133 CARMIL2Q6F5E8 1435 aa18.75■□□□□ 0.59
SCARNA16.1-201ENST00000516133 CHIC1Q5VXU3 224 aa18.75■□□□□ 0.59
SCARNA16.1-201ENST00000516133 PRXQ9BXM0 1461 aa18.75■□□□□ 0.59
SCARNA16.1-201ENST00000516133 IQGAP2Q13576 1575 aa18.74■□□□□ 0.59
SCARNA16.1-201ENST00000516133 EEA1Q15075 1411 aa18.74■□□□□ 0.59
SCARNA16.1-201ENST00000516133 NPM1P06748 294 aaKnown RBP eCLIP18.7■□□□□ 0.58
SCARNA16.1-201ENST00000516133 PTPRGP23470 1445 aa18.7■□□□□ 0.58
SCARNA16.1-201ENST00000516133 TNIKQ9UKE5 1360 aa18.68■□□□□ 0.58
SCARNA16.1-201ENST00000516133 UGGT2Q9NYU1 1516 aa18.65■□□□□ 0.58
SCARNA16.1-201ENST00000516133 FAM9AQ8IZU1 332 aaPredicted RBP18.65■□□□□ 0.58
SCARNA16.1-201ENST00000516133 TTBK1Q5TCY1 1321 aaPredicted RBP18.64■□□□□ 0.57
SCARNA16.1-201ENST00000516133 DISP1Q96F81 1524 aa18.63■□□□□ 0.57
SCARNA16.1-201ENST00000516133 GOLGA3Q08378 1498 aa18.58■□□□□ 0.56
SCARNA16.1-201ENST00000516133 CTTNBP2Q8WZ74 1663 aa18.57■□□□□ 0.56
SCARNA16.1-201ENST00000516133 ADCY10Q96PN6 1610 aa18.56■□□□□ 0.56
SCARNA16.1-201ENST00000516133 UACAQ9BZF9 1416 aa18.54■□□□□ 0.56
SCARNA16.1-201ENST00000516133 KIAA0556O60303 1618 aa18.53■□□□□ 0.56
SCARNA16.1-201ENST00000516133 UHRF1BP1LA0JNW5 1464 aa18.52■□□□□ 0.55
SCARNA16.1-201ENST00000516133 MAPKBP1O60336 1514 aa18.51■□□□□ 0.55
SCARNA16.1-201ENST00000516133 ABCC2Q92887 1545 aa18.5■□□□□ 0.55
SCARNA16.1-201ENST00000516133 FAM69CQ0P6D2 419 aa18.49■□□□□ 0.55
SCARNA16.1-201ENST00000516133 KIF21BO75037 1637 aa18.47■□□□□ 0.55
SCARNA16.1-201ENST00000516133 ABCC10Q5T3U5 1492 aa18.46■□□□□ 0.55
SCARNA16.1-201ENST00000516133 P3H3Q8IVL6 736 aa18.46■□□□□ 0.55
SCARNA16.1-201ENST00000516133 UBTFP17480 764 aaKnown RBP18.45■□□□□ 0.54
SCARNA16.1-201ENST00000516133 PLB1Q6P1J6 1458 aa18.42■□□□□ 0.54
SCARNA16.1-201ENST00000516133 RANGAP1P46060 587 aaPredicted RBP18.42■□□□□ 0.54
SCARNA16.1-201ENST00000516133 KDM5BQ9UGL1 1544 aa18.42■□□□□ 0.54
SCARNA16.1-201ENST00000516133 ASXL2Q76L83 1435 aa18.4■□□□□ 0.54
SCARNA16.1-201ENST00000516133 EHMT2Q96KQ7 1210 aa18.39■□□□□ 0.53
SCARNA16.1-201ENST00000516133 KIF13AQ9H1H9 1805 aa18.39■□□□□ 0.53
SCARNA16.1-201ENST00000516133 SAMD9Q5K651 1589 aa18.37■□□□□ 0.53
SCARNA16.1-201ENST00000516133 ABCA8O94911 1581 aa18.36■□□□□ 0.53
SCARNA16.1-201ENST00000516133 DIP2BQ9P265 1576 aa18.36■□□□□ 0.53
SCARNA16.1-201ENST00000516133 ZCCHC11Q5TAX3 1644 aaKnown RBP18.31■□□□□ 0.52
SCARNA16.1-201ENST00000516133 EFCAB5A4FU69 1503 aa18.31■□□□□ 0.52
SCARNA16.1-201ENST00000516133 FHOD3Q2V2M9 1422 aa18.3■□□□□ 0.52
SCARNA16.1-201ENST00000516133 GLI2P10070 1586 aa18.29■□□□□ 0.52
SCARNA16.1-201ENST00000516133 EPRSP07814 1512 aaKnown RBP18.28■□□□□ 0.52
SCARNA16.1-201ENST00000516133 WDR7Q9Y4E6 1490 aa18.27■□□□□ 0.52
SCARNA16.1-201ENST00000516133 ATP10BO94823 1461 aa18.26■□□□□ 0.51
SCARNA16.1-201ENST00000516133 ARID3CA6NKF2 412 aa18.26■□□□□ 0.51
SCARNA16.1-201ENST00000516133 KCNH8Q96L42 1107 aa18.26■□□□□ 0.51
SCARNA16.1-201ENST00000516133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.24■□□□□ 0.51
SCARNA16.1-201ENST00000516133 HNRNPUL2Q1KMD3 747 aaKnown RBP18.24■□□□□ 0.51
SCARNA16.1-201ENST00000516133 RAPGEF6Q8TEU7 1601 aa18.23■□□□□ 0.51
SCARNA16.1-201ENST00000516133 TSPOAP1O95153 1857 aa18.21■□□□□ 0.51
SCARNA16.1-201ENST00000516133 FMN1Q68DA7 1419 aa18.2■□□□□ 0.5
SCARNA16.1-201ENST00000516133 NUP153P49790 1475 aaKnown RBP18.2■□□□□ 0.5
SCARNA16.1-201ENST00000516133 ARHGAP35Q9NRY4 1499 aa18.19■□□□□ 0.5
SCARNA16.1-201ENST00000516133 PLEKHD1A6NEE1 506 aa18.18■□□□□ 0.5
SCARNA16.1-201ENST00000516133 CD109Q6YHK3 1445 aa18.16■□□□□ 0.5
SCARNA16.1-201ENST00000516133 TEX14Q8IWB6 1497 aa18.16■□□□□ 0.5
SCARNA16.1-201ENST00000516133 MAP3K4Q9Y6R4 1608 aa18.16■□□□□ 0.5
SCARNA16.1-201ENST00000516133 ATP1B4Q9UN42 357 aaPredicted RBP18.14■□□□□ 0.49
SCARNA16.1-201ENST00000516133 KDM6BO15054 1643 aa18.12■□□□□ 0.49
SCARNA16.1-201ENST00000516133 MAGI3Q5TCQ9 1506 aa18.11■□□□□ 0.49
SCARNA16.1-201ENST00000516133 PPRC1Q5VV67 1664 aaKnown RBP18.1■□□□□ 0.49
SCARNA16.1-201ENST00000516133 CDK11AQ9UQ88 783 aaPredicted RBP18.1■□□□□ 0.49
SCARNA16.1-201ENST00000516133 CFAP43Q8NDM7 1665 aa18.09■□□□□ 0.49
SCARNA16.1-201ENST00000516133 CLIP1P30622 1438 aa18.08■□□□□ 0.49
SCARNA16.1-201ENST00000516133 COL17A1Q9UMD9 1497 aaPredicted RBP18.04■□□□□ 0.48
SCARNA16.1-201ENST00000516133 HECW1Q76N89 1606 aa18.04■□□□□ 0.48
SCARNA16.1-201ENST00000516133 ABCA9Q8IUA7 1624 aa18.04■□□□□ 0.48
SCARNA16.1-201ENST00000516133 PHLDB1Q86UU1 1377 aa18.04■□□□□ 0.48
SCARNA16.1-201ENST00000516133 CASKIN1Q8WXD9 1431 aa18.02■□□□□ 0.48
SCARNA16.1-201ENST00000516133 CDK13Q14004 1512 aaKnown RBP18.02■□□□□ 0.47
SCARNA16.1-201ENST00000516133 LOC105371045A0A1W2PR82 267 aa17.98■□□□□ 0.47
SCARNA16.1-201ENST00000516133 NEO1Q92859 1461 aa17.96■□□□□ 0.47
SCARNA16.1-201ENST00000516133 AEBP2Q6ZN18 517 aaPredicted RBP17.96■□□□□ 0.47
SCARNA16.1-201ENST00000516133 ARAP3Q8WWN8 1544 aa17.96■□□□□ 0.47
SCARNA16.1-201ENST00000516133 CCDC18Q5T9S5 1454 aa17.95■□□□□ 0.46
SCARNA16.1-201ENST00000516133 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.94■□□□□ 0.46
SCARNA16.1-201ENST00000516133 TROQ12816 1431 aaPredicted RBP17.94■□□□□ 0.46
SCARNA16.1-201ENST00000516133 CEP162Q5TB80 1403 aa17.94■□□□□ 0.46
SCARNA16.1-201ENST00000516133 FYCO1Q9BQS8 1478 aa17.94■□□□□ 0.46
SCARNA16.1-201ENST00000516133 PCF11O94913 1555 aaKnown RBP17.91■□□□□ 0.46
SCARNA16.1-201ENST00000516133 RAPGEF3O95398 923 aa17.9■□□□□ 0.46
SCARNA16.1-201ENST00000516133 PLCH2O75038 1416 aa17.89■□□□□ 0.46
SCARNA16.1-201ENST00000516133 FANCAO15360 1455 aa17.89■□□□□ 0.45
SCARNA16.1-201ENST00000516133 EFCAB2Q5VUJ9 269 aa17.89■□□□□ 0.45
SCARNA16.1-201ENST00000516133 AKNAQ7Z591 1439 aa17.89■□□□□ 0.45
SCARNA16.1-201ENST00000516133 TTC37Q6PGP7 1564 aa17.87■□□□□ 0.45
SCARNA16.1-201ENST00000516133 LRRIQ1Q96JM4 1722 aa17.86■□□□□ 0.45
SCARNA16.1-201ENST00000516133 KIF14Q15058 1648 aa17.85■□□□□ 0.45
SCARNA16.1-201ENST00000516133 CFAP74Q9C0B2 1584 aa17.84■□□□□ 0.45
SCARNA16.1-201ENST00000516133 DENND4BO75064 1496 aaPredicted RBP17.84■□□□□ 0.45
SCARNA16.1-201ENST00000516133 KDM4FA0A1W2PPD8 638 aa17.84■□□□□ 0.45
SCARNA16.1-201ENST00000516133 SCAPERQ9BY12 1400 aa17.79■□□□□ 0.44
SCARNA16.1-201ENST00000516133 MTUS2Q5JR59 1369 aa17.79■□□□□ 0.44
SCARNA16.1-201ENST00000516133 MYO5CQ9NQX4 1742 aa17.78■□□□□ 0.44
SCARNA16.1-201ENST00000516133 ADGRL1O94910 1474 aa17.78■□□□□ 0.44
SCARNA16.1-201ENST00000516133 ARHGAP5Q13017 1502 aa17.77■□□□□ 0.43
SCARNA16.1-201ENST00000516133 VPS8Q8N3P4 1428 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms