RNA–Protein interactions for RNA: ENST00000515815.5

SDHA-219, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 704 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-219ENST00000515815 PRG4Q92954 1404 aaPredicted RBP20.78■□□□□ 0.92
SDHA-219ENST00000515815 KIAA0586Q9BVV6 1533 aa20.77■□□□□ 0.92
SDHA-219ENST00000515815 KIF13AQ9H1H9 1805 aa20.76■□□□□ 0.91
SDHA-219ENST00000515815 IGF1RP08069 1367 aa20.75■□□□□ 0.91
SDHA-219ENST00000515815 ADCY10Q96PN6 1610 aa20.71■□□□□ 0.91
SDHA-219ENST00000515815 CARMIL1Q5VZK9 1371 aa20.7■□□□□ 0.9
SDHA-219ENST00000515815 RAPGEF2Q9Y4G8 1499 aa20.67■□□□□ 0.9
SDHA-219ENST00000515815 TRHP20396 242 aaPredicted RBP20.64■□□□□ 0.89
SDHA-219ENST00000515815 KIAA0556O60303 1618 aa20.64■□□□□ 0.89
SDHA-219ENST00000515815 JPH4Q96JJ6 628 aa20.61■□□□□ 0.89
SDHA-219ENST00000515815 MAPKBP1O60336 1514 aa20.61■□□□□ 0.89
SDHA-219ENST00000515815 UGGT2Q9NYU1 1516 aa20.58■□□□□ 0.89
SDHA-219ENST00000515815 DIP2BQ9P265 1576 aa20.57■□□□□ 0.88
SDHA-219ENST00000515815 CARMIL2Q6F5E8 1435 aa20.56■□□□□ 0.88
SDHA-219ENST00000515815 DISP1Q96F81 1524 aa20.53■□□□□ 0.88
SDHA-219ENST00000515815 PRXQ9BXM0 1461 aa20.5■□□□□ 0.87
SDHA-219ENST00000515815 TSPOAP1O95153 1857 aa20.48■□□□□ 0.87
SDHA-219ENST00000515815 ZCCHC11Q5TAX3 1644 aaKnown RBP20.48■□□□□ 0.87
SDHA-219ENST00000515815 ABCC2Q92887 1545 aa20.48■□□□□ 0.87
SDHA-219ENST00000515815 TNIKQ9UKE5 1360 aa20.46■□□□□ 0.87
SDHA-219ENST00000515815 EEA1Q15075 1411 aa20.44■□□□□ 0.86
SDHA-219ENST00000515815 GOLGA3Q08378 1498 aa20.43■□□□□ 0.86
SDHA-219ENST00000515815 PTPRGP23470 1445 aa20.43■□□□□ 0.86
SDHA-219ENST00000515815 ABCC10Q5T3U5 1492 aa20.43■□□□□ 0.86
SDHA-219ENST00000515815 KIF21BO75037 1637 aa20.42■□□□□ 0.86
SDHA-219ENST00000515815 UHRF1BP1LA0JNW5 1464 aa20.41■□□□□ 0.86
SDHA-219ENST00000515815 SAMD9Q5K651 1589 aa20.4■□□□□ 0.86
SDHA-219ENST00000515815 UACAQ9BZF9 1416 aa20.36■□□□□ 0.85
SDHA-219ENST00000515815 PPRC1Q5VV67 1664 aaKnown RBP20.35■□□□□ 0.85
SDHA-219ENST00000515815 NPM1P06748 294 aaKnown RBP eCLIP20.35■□□□□ 0.85
SDHA-219ENST00000515815 ABCA8O94911 1581 aa20.34■□□□□ 0.85
SDHA-219ENST00000515815 KDM6BO15054 1643 aa20.33■□□□□ 0.84
SDHA-219ENST00000515815 MAP3K4Q9Y6R4 1608 aa20.33■□□□□ 0.84
SDHA-219ENST00000515815 TTBK1Q5TCY1 1321 aaPredicted RBP20.32■□□□□ 0.84
SDHA-219ENST00000515815 GLI2P10070 1586 aa20.32■□□□□ 0.84
SDHA-219ENST00000515815 KDM5BQ9UGL1 1544 aa20.32■□□□□ 0.84
SDHA-219ENST00000515815 PLB1Q6P1J6 1458 aa20.29■□□□□ 0.84
SDHA-219ENST00000515815 ASXL2Q76L83 1435 aa20.27■□□□□ 0.84
SDHA-219ENST00000515815 RAPGEF6Q8TEU7 1601 aa20.27■□□□□ 0.84
SDHA-219ENST00000515815 CFAP43Q8NDM7 1665 aa20.27■□□□□ 0.84
SDHA-219ENST00000515815 EFCAB5A4FU69 1503 aa20.24■□□□□ 0.83
SDHA-219ENST00000515815 CSRNP3Q8WYN3 585 aa20.21■□□□□ 0.83
SDHA-219ENST00000515815 WDR7Q9Y4E6 1490 aa20.21■□□□□ 0.83
SDHA-219ENST00000515815 FAM69CQ0P6D2 419 aa20.2■□□□□ 0.82
SDHA-219ENST00000515815 EPRSP07814 1512 aaKnown RBP20.2■□□□□ 0.82
SDHA-219ENST00000515815 TEX14Q8IWB6 1497 aa20.13■□□□□ 0.81
SDHA-219ENST00000515815 ABCA9Q8IUA7 1624 aa20.09■□□□□ 0.81
SDHA-219ENST00000515815 FAM9AQ8IZU1 332 aaPredicted RBP20.08■□□□□ 0.81
SDHA-219ENST00000515815 FHOD3Q2V2M9 1422 aa20.08■□□□□ 0.8
SDHA-219ENST00000515815 HECW1Q76N89 1606 aa20.06■□□□□ 0.8
SDHA-219ENST00000515815 CHIC1Q5VXU3 224 aa20.05■□□□□ 0.8
SDHA-219ENST00000515815 NUP153P49790 1475 aaKnown RBP20.03■□□□□ 0.8
SDHA-219ENST00000515815 LRRIQ1Q96JM4 1722 aa20.02■□□□□ 0.79
SDHA-219ENST00000515815 CFAP74Q9C0B2 1584 aa20■□□□□ 0.79
SDHA-219ENST00000515815 MAGI3Q5TCQ9 1506 aa19.99■□□□□ 0.79
SDHA-219ENST00000515815 P3H3Q8IVL6 736 aa19.99■□□□□ 0.79
SDHA-219ENST00000515815 ATP10BO94823 1461 aa19.99■□□□□ 0.79
SDHA-219ENST00000515815 RANGAP1P46060 587 aaPredicted RBP19.94■□□□□ 0.78
SDHA-219ENST00000515815 MYO5CQ9NQX4 1742 aa19.93■□□□□ 0.78
SDHA-219ENST00000515815 ARHGAP35Q9NRY4 1499 aa19.93■□□□□ 0.78
SDHA-219ENST00000515815 PCF11O94913 1555 aaKnown RBP19.93■□□□□ 0.78
SDHA-219ENST00000515815 TTC37Q6PGP7 1564 aa19.93■□□□□ 0.78
SDHA-219ENST00000515815 CD109Q6YHK3 1445 aa19.93■□□□□ 0.78
SDHA-219ENST00000515815 CDK13Q14004 1512 aaKnown RBP19.92■□□□□ 0.78
SDHA-219ENST00000515815 ARID3CA6NKF2 412 aa19.9■□□□□ 0.78
SDHA-219ENST00000515815 FMN1Q68DA7 1419 aa19.9■□□□□ 0.78
SDHA-219ENST00000515815 KIF14Q15058 1648 aa19.87■□□□□ 0.77
SDHA-219ENST00000515815 RICTORQ6R327 1708 aa19.86■□□□□ 0.77
SDHA-219ENST00000515815 UBTFP17480 764 aaKnown RBP19.86■□□□□ 0.77
SDHA-219ENST00000515815 EHMT2Q96KQ7 1210 aa19.86■□□□□ 0.77
SDHA-219ENST00000515815 COL17A1Q9UMD9 1497 aaPredicted RBP19.86■□□□□ 0.77
SDHA-219ENST00000515815 FRMPD1Q5SYB0 1578 aa19.85■□□□□ 0.77
SDHA-219ENST00000515815 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.85■□□□□ 0.77
SDHA-219ENST00000515815 AEBP2Q6ZN18 517 aaPredicted RBP19.83■□□□□ 0.77
SDHA-219ENST00000515815 KCNH8Q96L42 1107 aa19.82■□□□□ 0.76
SDHA-219ENST00000515815 ARAP3Q8WWN8 1544 aa19.81■□□□□ 0.76
SDHA-219ENST00000515815 NEO1Q92859 1461 aa19.81■□□□□ 0.76
SDHA-219ENST00000515815 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.8■□□□□ 0.76
SDHA-219ENST00000515815 HNRNPUL2Q1KMD3 747 aaKnown RBP19.8■□□□□ 0.76
SDHA-219ENST00000515815 ADGRL1O94910 1474 aa19.79■□□□□ 0.76
SDHA-219ENST00000515815 ARHGEF40Q8TER5 1519 aa19.78■□□□□ 0.76
SDHA-219ENST00000515815 CCDC18Q5T9S5 1454 aa19.77■□□□□ 0.76
SDHA-219ENST00000515815 PREX2Q70Z35 1606 aa19.76■□□□□ 0.75
SDHA-219ENST00000515815 FYCO1Q9BQS8 1478 aa19.75■□□□□ 0.75
SDHA-219ENST00000515815 FANCAO15360 1455 aa19.73■□□□□ 0.75
SDHA-219ENST00000515815 CDC42BPAQ5VT25 1732 aa19.72■□□□□ 0.75
SDHA-219ENST00000515815 ZMYM4Q5VZL5 1548 aa19.71■□□□□ 0.75
SDHA-219ENST00000515815 PHLDB1Q86UU1 1377 aa19.71■□□□□ 0.75
SDHA-219ENST00000515815 CDC42BPBQ9Y5S2 1711 aa19.71■□□□□ 0.75
SDHA-219ENST00000515815 CLIP1P30622 1438 aa19.69■□□□□ 0.74
SDHA-219ENST00000515815 CASKIN1Q8WXD9 1431 aa19.68■□□□□ 0.74
SDHA-219ENST00000515815 PLEKHD1A6NEE1 506 aa19.67■□□□□ 0.74
SDHA-219ENST00000515815 ITSN2Q9NZM3 1697 aa19.67■□□□□ 0.74
SDHA-219ENST00000515815 BCORL1Q5H9F3 1711 aa19.66■□□□□ 0.74
SDHA-219ENST00000515815 TROQ12816 1431 aaPredicted RBP19.66■□□□□ 0.74
SDHA-219ENST00000515815 ARHGAP5Q13017 1502 aa19.64■□□□□ 0.73
SDHA-219ENST00000515815 ZFYVE16Q7Z3T8 1539 aa19.63■□□□□ 0.73
SDHA-219ENST00000515815 ADAMTSL3P82987 1691 aa19.62■□□□□ 0.73
SDHA-219ENST00000515815 DENND4BO75064 1496 aaPredicted RBP19.62■□□□□ 0.73
SDHA-219ENST00000515815 AKNAQ7Z591 1439 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms