RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 APLP2Q06481 763 aa14.82□□□□□ -0.04
TPM3-222ENST00000515609 VPS8Q8N3P4 1428 aa14.81□□□□□ -0.04
TPM3-222ENST00000515609 GRIN2AQ12879 1464 aa14.79□□□□□ -0.04
TPM3-222ENST00000515609 RANGAP1P46060 587 aaPredicted RBP14.76□□□□□ -0.05
TPM3-222ENST00000515609 KIAA0586Q9BVV6 1533 aa14.76□□□□□ -0.05
TPM3-222ENST00000515609 IQGAP2Q13576 1575 aa14.75□□□□□ -0.05
TPM3-222ENST00000515609 ARHGAP35Q9NRY4 1499 aa14.74□□□□□ -0.05
TPM3-222ENST00000515609 FBLN2P98095 1184 aa14.73□□□□□ -0.05
TPM3-222ENST00000515609 FMN1Q68DA7 1419 aa14.72□□□□□ -0.05
TPM3-222ENST00000515609 ARAP1Q96P48 1450 aa14.69□□□□□ -0.06
TPM3-222ENST00000515609 NUP160Q12769 1436 aa14.69□□□□□ -0.06
TPM3-222ENST00000515609 TRIM26Q12899 539 aaPredicted RBP14.69□□□□□ -0.06
TPM3-222ENST00000515609 UGGT2Q9NYU1 1516 aa14.68□□□□□ -0.06
TPM3-222ENST00000515609 SAMD9Q5K651 1589 aa14.66□□□□□ -0.06
TPM3-222ENST00000515609 CARMIL2Q6F5E8 1435 aa14.66□□□□□ -0.06
TPM3-222ENST00000515609 MAP3K1Q13233 1512 aa14.63□□□□□ -0.07
TPM3-222ENST00000515609 FYCO1Q9BQS8 1478 aa14.62□□□□□ -0.07
TPM3-222ENST00000515609 CEP170Q5SW79 1584 aa14.61□□□□□ -0.07
TPM3-222ENST00000515609 CASKIN1Q8WXD9 1431 aa14.6□□□□□ -0.07
TPM3-222ENST00000515609 JPH4Q96JJ6 628 aa14.6□□□□□ -0.07
TPM3-222ENST00000515609 FHOD3Q2V2M9 1422 aa14.59□□□□□ -0.07
TPM3-222ENST00000515609 P3H3Q8IVL6 736 aa14.59□□□□□ -0.07
TPM3-222ENST00000515609 CHD1O14646 1710 aa14.57□□□□□ -0.08
TPM3-222ENST00000515609 KIAA0556O60303 1618 aa14.55□□□□□ -0.08
TPM3-222ENST00000515609 DISP1Q96F81 1524 aa14.53□□□□□ -0.08
TPM3-222ENST00000515609 CCDC18Q5T9S5 1454 aa14.53□□□□□ -0.08
TPM3-222ENST00000515609 PCGF6Q9BYE7 350 aa14.53□□□□□ -0.08
TPM3-222ENST00000515609 ATP1B4Q9UN42 357 aaPredicted RBP14.53□□□□□ -0.08
TPM3-222ENST00000515609 PCF11O94913 1555 aaKnown RBP14.51□□□□□ -0.09
TPM3-222ENST00000515609 HECW1Q76N89 1606 aa14.51□□□□□ -0.09
TPM3-222ENST00000515609 TIAM1Q13009 1591 aa14.51□□□□□ -0.09
TPM3-222ENST00000515609 CDK11AQ9UQ88 783 aaPredicted RBP14.49□□□□□ -0.09
TPM3-222ENST00000515609 PRG4Q92954 1404 aaPredicted RBP14.49□□□□□ -0.09
TPM3-222ENST00000515609 CFAP43Q8NDM7 1665 aa14.47□□□□□ -0.09
TPM3-222ENST00000515609 OSCARQ8IYS5 282 aa14.47□□□□□ -0.09
TPM3-222ENST00000515609 SHROOM2Q13796 1616 aa14.47□□□□□ -0.09
TPM3-222ENST00000515609 PPARGC1BQ86YN6 1023 aaKnown RBP14.46□□□□□ -0.09
TPM3-222ENST00000515609 LRRC9Q6ZRR7 1453 aa14.45□□□□□ -0.1
TPM3-222ENST00000515609 CLASP1Q7Z460 1538 aa14.45□□□□□ -0.1
TPM3-222ENST00000515609 MTUS2Q5JR59 1369 aa14.45□□□□□ -0.1
TPM3-222ENST00000515609 PTPRGP23470 1445 aa14.44□□□□□ -0.1
TPM3-222ENST00000515609 RAPGEF6Q8TEU7 1601 aa14.42□□□□□ -0.1
TPM3-222ENST00000515609 EPRSP07814 1512 aaKnown RBP14.41□□□□□ -0.1
TPM3-222ENST00000515609 KANK4Q5T7N3 995 aaPredicted RBP14.4□□□□□ -0.1
TPM3-222ENST00000515609 EHBP1L1Q8N3D4 1523 aa14.4□□□□□ -0.1
TPM3-222ENST00000515609 TTBK1Q5TCY1 1321 aaPredicted RBP14.4□□□□□ -0.1
TPM3-222ENST00000515609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.36□□□□□ -0.11
TPM3-222ENST00000515609 HNRNPUL2Q1KMD3 747 aaKnown RBP14.36□□□□□ -0.11
TPM3-222ENST00000515609 NUP153P49790 1475 aaKnown RBP14.35□□□□□ -0.11
TPM3-222ENST00000515609 ABCA8O94911 1581 aa14.34□□□□□ -0.11
TPM3-222ENST00000515609 UACAQ9BZF9 1416 aa14.34□□□□□ -0.11
TPM3-222ENST00000515609 SUPT6HQ7KZ85 1726 aaKnown RBP14.34□□□□□ -0.11
TPM3-222ENST00000515609 RRBP1Q9P2E9 1410 aaKnown RBP14.33□□□□□ -0.11
TPM3-222ENST00000515609 PLB1Q6P1J6 1458 aa14.33□□□□□ -0.12
TPM3-222ENST00000515609 PLEKHD1A6NEE1 506 aa14.32□□□□□ -0.12
TPM3-222ENST00000515609 CCNB3Q8WWL7 1395 aa14.32□□□□□ -0.12
TPM3-222ENST00000515609 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.32□□□□□ -0.12
TPM3-222ENST00000515609 UHRF1BP1LA0JNW5 1464 aa14.3□□□□□ -0.12
TPM3-222ENST00000515609 TROQ12816 1431 aaPredicted RBP14.28□□□□□ -0.12
TPM3-222ENST00000515609 CDK13Q14004 1512 aaKnown RBP14.28□□□□□ -0.12
TPM3-222ENST00000515609 NCOA2Q15596 1464 aa14.28□□□□□ -0.12
TPM3-222ENST00000515609 ABCC2Q92887 1545 aa14.28□□□□□ -0.12
TPM3-222ENST00000515609 LRRIQ1Q96JM4 1722 aa14.27□□□□□ -0.12
TPM3-222ENST00000515609 MYOM3Q5VTT5 1437 aa14.26□□□□□ -0.13
TPM3-222ENST00000515609 MIA2Q96PC5 1412 aa14.25□□□□□ -0.13
TPM3-222ENST00000515609 ATP10BO94823 1461 aa14.25□□□□□ -0.13
TPM3-222ENST00000515609 PHLDB1Q86UU1 1377 aa14.24□□□□□ -0.13
TPM3-222ENST00000515609 FGD6Q6ZV73 1430 aa14.24□□□□□ -0.13
TPM3-222ENST00000515609 ARHGEF11O15085 1522 aa14.23□□□□□ -0.13
TPM3-222ENST00000515609 ARID3CA6NKF2 412 aa14.22□□□□□ -0.13
TPM3-222ENST00000515609 NPM1P06748 294 aaKnown RBP eCLIP14.22□□□□□ -0.13
TPM3-222ENST00000515609 ZEB1P37275 1124 aaPredicted RBP14.21□□□□□ -0.13
TPM3-222ENST00000515609 FAM50AQ14320 339 aaKnown RBP14.21□□□□□ -0.13
TPM3-222ENST00000515609 KIF14Q15058 1648 aa14.21□□□□□ -0.13
TPM3-222ENST00000515609 ADCY10Q96PN6 1610 aa14.21□□□□□ -0.13
TPM3-222ENST00000515609 ERCC6L2Q5T890 1561 aa14.21□□□□□ -0.14
TPM3-222ENST00000515609 MAGI3Q5TCQ9 1506 aa14.2□□□□□ -0.14
TPM3-222ENST00000515609 KDM5BQ9UGL1 1544 aa14.2□□□□□ -0.14
TPM3-222ENST00000515609 ACIN1Q9UKV3 1341 aaKnown RBP14.19□□□□□ -0.14
TPM3-222ENST00000515609 ITSN2Q9NZM3 1697 aa14.18□□□□□ -0.14
TPM3-222ENST00000515609 TCOF1Q13428 1488 aaKnown RBP14.15□□□□□ -0.14
TPM3-222ENST00000515609 CFDP1Q9UEE9 299 aaPredicted RBP14.15□□□□□ -0.14
TPM3-222ENST00000515609 PTPN23Q9H3S7 1636 aa14.14□□□□□ -0.15
TPM3-222ENST00000515609 ZCCHC11Q5TAX3 1644 aaKnown RBP14.12□□□□□ -0.15
TPM3-222ENST00000515609 HRCP23327 699 aa14.12□□□□□ -0.15
TPM3-222ENST00000515609 RSPH4AQ5TD94 716 aa14.11□□□□□ -0.15
TPM3-222ENST00000515609 CCER1Q8TC90 406 aaPredicted RBP14.11□□□□□ -0.15
TPM3-222ENST00000515609 ITGAEP38570 1179 aa14.1□□□□□ -0.15
TPM3-222ENST00000515609 GPATCH8Q9UKJ3 1502 aaKnown RBP14.1□□□□□ -0.15
TPM3-222ENST00000515609 ABCC10Q5T3U5 1492 aa14.08□□□□□ -0.16
TPM3-222ENST00000515609 PLEKHH2Q8IVE3 1493 aa14.07□□□□□ -0.16
TPM3-222ENST00000515609 WDR7Q9Y4E6 1490 aa14.07□□□□□ -0.16
TPM3-222ENST00000515609 CLSPNQ9HAW4 1339 aa14.07□□□□□ -0.16
TPM3-222ENST00000515609 SETD5Q9C0A6 1442 aa14.07□□□□□ -0.16
TPM3-222ENST00000515609 AKNAQ7Z591 1439 aa14.06□□□□□ -0.16
TPM3-222ENST00000515609 EFCAB2Q5VUJ9 269 aa14.04□□□□□ -0.16
TPM3-222ENST00000515609 KCNH8Q96L42 1107 aa14.04□□□□□ -0.16
TPM3-222ENST00000515609 ARAP3Q8WWN8 1544 aa14.04□□□□□ -0.16
TPM3-222ENST00000515609 ROCK1Q13464 1354 aa14.03□□□□□ -0.16
TPM3-222ENST00000515609 CAMSAP2Q08AD1 1489 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms