RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 KIF27Q86VH2 1401 aa26.41■■□□□ 1.82
DDR1-278ENST00000515233 AEBP2Q6ZN18 517 aaPredicted RBP26.39■■□□□ 1.82
DDR1-278ENST00000515233 KIF13AQ9H1H9 1805 aa26.39■■□□□ 1.81
DDR1-278ENST00000515233 KIAA0586Q9BVV6 1533 aa26.39■■□□□ 1.81
DDR1-278ENST00000515233 CUL7Q14999 1698 aa26.35■■□□□ 1.81
DDR1-278ENST00000515233 NPM1P06748 294 aaKnown RBP eCLIP26.34■■□□□ 1.81
DDR1-278ENST00000515233 ABCC10Q5T3U5 1492 aa26.29■■□□□ 1.8
DDR1-278ENST00000515233 MAPKBP1O60336 1514 aa26.29■■□□□ 1.8
DDR1-278ENST00000515233 ADCY10Q96PN6 1610 aa26.26■■□□□ 1.79
DDR1-278ENST00000515233 FAM69CQ0P6D2 419 aa26.26■■□□□ 1.79
DDR1-278ENST00000515233 CARMIL1Q5VZK9 1371 aa26.25■■□□□ 1.79
DDR1-278ENST00000515233 DIP2BQ9P265 1576 aa26.18■■□□□ 1.78
DDR1-278ENST00000515233 PTPRGP23470 1445 aa26.15■■□□□ 1.78
DDR1-278ENST00000515233 CARMIL2Q6F5E8 1435 aa26.12■■□□□ 1.77
DDR1-278ENST00000515233 TNIKQ9UKE5 1360 aa26.1■■□□□ 1.77
DDR1-278ENST00000515233 IQGAP2Q13576 1575 aa26.07■■□□□ 1.76
DDR1-278ENST00000515233 ABCC2Q92887 1545 aa26.02■■□□□ 1.76
DDR1-278ENST00000515233 TTBK1Q5TCY1 1321 aaPredicted RBP26.01■■□□□ 1.75
DDR1-278ENST00000515233 RAPGEF2Q9Y4G8 1499 aa25.99■■□□□ 1.75
DDR1-278ENST00000515233 DISP1Q96F81 1524 aa25.98■■□□□ 1.75
DDR1-278ENST00000515233 UHRF1BP1LA0JNW5 1464 aa25.98■■□□□ 1.75
DDR1-278ENST00000515233 KDM6BO15054 1643 aa25.98■■□□□ 1.75
DDR1-278ENST00000515233 TSPOAP1O95153 1857 aa25.98■■□□□ 1.75
DDR1-278ENST00000515233 UACAQ9BZF9 1416 aa25.96■■□□□ 1.75
DDR1-278ENST00000515233 PLB1Q6P1J6 1458 aa25.94■■□□□ 1.74
DDR1-278ENST00000515233 ASXL2Q76L83 1435 aa25.94■■□□□ 1.74
DDR1-278ENST00000515233 UGGT2Q9NYU1 1516 aa25.93■■□□□ 1.74
DDR1-278ENST00000515233 GLI2P10070 1586 aa25.9■■□□□ 1.74
DDR1-278ENST00000515233 KDM5BQ9UGL1 1544 aa25.87■■□□□ 1.73
DDR1-278ENST00000515233 KIAA0556O60303 1618 aa25.84■■□□□ 1.73
DDR1-278ENST00000515233 KDM4FA0A1W2PPD8 638 aa25.82■■□□□ 1.72
DDR1-278ENST00000515233 PPRC1Q5VV67 1664 aaKnown RBP25.82■■□□□ 1.72
DDR1-278ENST00000515233 EPRSP07814 1512 aaKnown RBP25.78■■□□□ 1.72
DDR1-278ENST00000515233 ZCCHC11Q5TAX3 1644 aaKnown RBP25.77■■□□□ 1.72
DDR1-278ENST00000515233 CTTNBP2Q8WZ74 1663 aa25.75■■□□□ 1.71
DDR1-278ENST00000515233 MAP3K4Q9Y6R4 1608 aa25.74■■□□□ 1.71
DDR1-278ENST00000515233 GOLGA3Q08378 1498 aa25.71■■□□□ 1.71
DDR1-278ENST00000515233 PRXQ9BXM0 1461 aa25.7■■□□□ 1.7
DDR1-278ENST00000515233 TEX14Q8IWB6 1497 aa25.68■■□□□ 1.7
DDR1-278ENST00000515233 COL17A1Q9UMD9 1497 aaPredicted RBP25.68■■□□□ 1.7
DDR1-278ENST00000515233 WDR7Q9Y4E6 1490 aa25.66■■□□□ 1.7
DDR1-278ENST00000515233 ABCA8O94911 1581 aa25.62■■□□□ 1.69
DDR1-278ENST00000515233 MAGI3Q5TCQ9 1506 aa25.54■■□□□ 1.68
DDR1-278ENST00000515233 KCNH8Q96L42 1107 aa25.54■■□□□ 1.68
DDR1-278ENST00000515233 CD109Q6YHK3 1445 aa25.54■■□□□ 1.68
DDR1-278ENST00000515233 ADGRL1O94910 1474 aa25.53■■□□□ 1.68
DDR1-278ENST00000515233 CFAP43Q8NDM7 1665 aa25.53■■□□□ 1.68
DDR1-278ENST00000515233 FAM9AQ8IZU1 332 aaPredicted RBP25.53■■□□□ 1.68
DDR1-278ENST00000515233 CSRNP3Q8WYN3 585 aa25.5■■□□□ 1.67
DDR1-278ENST00000515233 P3H3Q8IVL6 736 aa25.45■■□□□ 1.66
DDR1-278ENST00000515233 ATP10BO94823 1461 aa25.43■■□□□ 1.66
DDR1-278ENST00000515233 SAMD9Q5K651 1589 aa25.39■■□□□ 1.66
DDR1-278ENST00000515233 EEA1Q15075 1411 aa25.36■■□□□ 1.65
DDR1-278ENST00000515233 ARID3CA6NKF2 412 aa25.35■■□□□ 1.65
DDR1-278ENST00000515233 ARAP3Q8WWN8 1544 aa25.35■■□□□ 1.65
DDR1-278ENST00000515233 PHLDB1Q86UU1 1377 aa25.32■■□□□ 1.64
DDR1-278ENST00000515233 ABCA9Q8IUA7 1624 aa25.31■■□□□ 1.64
DDR1-278ENST00000515233 RAPGEF6Q8TEU7 1601 aa25.31■■□□□ 1.64
DDR1-278ENST00000515233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.24■■□□□ 1.63
DDR1-278ENST00000515233 HNRNPUL2Q1KMD3 747 aaKnown RBP25.24■■□□□ 1.63
DDR1-278ENST00000515233 NUP153P49790 1475 aaKnown RBP25.23■■□□□ 1.63
DDR1-278ENST00000515233 HECW2Q9P2P5 1572 aa25.22■■□□□ 1.63
DDR1-278ENST00000515233 NEO1Q92859 1461 aa25.21■■□□□ 1.63
DDR1-278ENST00000515233 KIF21BO75037 1637 aa25.21■■□□□ 1.63
DDR1-278ENST00000515233 FHOD3Q2V2M9 1422 aa25.19■■□□□ 1.62
DDR1-278ENST00000515233 RANGAP1P46060 587 aaPredicted RBP25.18■■□□□ 1.62
DDR1-278ENST00000515233 RAPGEF3O95398 923 aa25.17■■□□□ 1.62
DDR1-278ENST00000515233 PLEKHD1A6NEE1 506 aa25.16■■□□□ 1.62
DDR1-278ENST00000515233 ILDR1Q86SU0 546 aaPredicted RBP25.13■■□□□ 1.61
DDR1-278ENST00000515233 EFCAB5A4FU69 1503 aa25.12■■□□□ 1.61
DDR1-278ENST00000515233 FRMPD1Q5SYB0 1578 aa25.07■■□□□ 1.6
DDR1-278ENST00000515233 ADAMTSL3P82987 1691 aa25.07■■□□□ 1.6
DDR1-278ENST00000515233 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.03■■□□□ 1.66e-7■■■■□ 21.9
DDR1-278ENST00000515233 AKNAQ7Z591 1439 aa25.03■■□□□ 1.6
DDR1-278ENST00000515233 PTPRMP28827 1452 aa25.02■■□□□ 1.6
DDR1-278ENST00000515233 DENND4BO75064 1496 aaPredicted RBP25.02■■□□□ 1.6
DDR1-278ENST00000515233 FANCAO15360 1455 aa25.01■■□□□ 1.59
DDR1-278ENST00000515233 BCORL1Q5H9F3 1711 aa25■■□□□ 1.59
DDR1-278ENST00000515233 RICTORQ6R327 1708 aa24.99■■□□□ 1.59
DDR1-278ENST00000515233 CFAP74Q9C0B2 1584 aa24.98■■□□□ 1.59
DDR1-278ENST00000515233 ARID4BQ4LE39 1312 aaPredicted RBP24.97■■□□□ 1.59
DDR1-278ENST00000515233 UBTFP17480 764 aaKnown RBP24.96■■□□□ 1.59
DDR1-278ENST00000515233 TTC37Q6PGP7 1564 aa24.95■■□□□ 1.58
DDR1-278ENST00000515233 CDK13Q14004 1512 aaKnown RBP24.94■■□□□ 1.58
DDR1-278ENST00000515233 ARHGEF40Q8TER5 1519 aa24.93■■□□□ 1.58
DDR1-278ENST00000515233 FMN1Q68DA7 1419 aa24.93■■□□□ 1.58
DDR1-278ENST00000515233 MADDQ8WXG6 1647 aa24.91■■□□□ 1.58
DDR1-278ENST00000515233 PLCH2O75038 1416 aa24.91■■□□□ 1.58
DDR1-278ENST00000515233 ZMYM4Q5VZL5 1548 aa24.9■■□□□ 1.58
DDR1-278ENST00000515233 CHIC1Q5VXU3 224 aa24.89■■□□□ 1.58
DDR1-278ENST00000515233 MAGI2Q86UL8 1455 aa24.89■■□□□ 1.57
DDR1-278ENST00000515233 ARHGAP35Q9NRY4 1499 aa24.88■■□□□ 1.57
DDR1-278ENST00000515233 CDK11AQ9UQ88 783 aaPredicted RBP24.87■■□□□ 1.57
DDR1-278ENST00000515233 EHMT2Q96KQ7 1210 aa24.86■■□□□ 1.57
DDR1-278ENST00000515233 HECW1Q76N89 1606 aa24.86■■□□□ 1.57
DDR1-278ENST00000515233 ATP1B4Q9UN42 357 aaPredicted RBP24.85■■□□□ 1.57
DDR1-278ENST00000515233 ZFYVE16Q7Z3T8 1539 aa24.84■■□□□ 1.57
DDR1-278ENST00000515233 POGZQ7Z3K3 1410 aa24.84■■□□□ 1.57
DDR1-278ENST00000515233 SCAPERQ9BY12 1400 aa24.84■■□□□ 1.57
DDR1-278ENST00000515233 YEATS2Q9ULM3 1422 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms