RNA–Protein interactions for RNA: ENST00000515068.1

CSF1R-207, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 5

Gene CSF1R, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-207ENST00000515068 RANGAP1P46060 587 aaPredicted RBP19.86■□□□□ 0.77
CSF1R-207ENST00000515068 GRIN2AQ12879 1464 aa19.85■□□□□ 0.77
CSF1R-207ENST00000515068 SYNJ2O15056 1496 aa19.83■□□□□ 0.76
CSF1R-207ENST00000515068 CEP170Q5SW79 1584 aa19.8■□□□□ 0.76
CSF1R-207ENST00000515068 VPS8Q8N3P4 1428 aa19.8■□□□□ 0.76
CSF1R-207ENST00000515068 SAMD9Q5K651 1589 aa19.78■□□□□ 0.76
CSF1R-207ENST00000515068 IQGAP2Q13576 1575 aa19.75■□□□□ 0.75
CSF1R-207ENST00000515068 CHD1O14646 1710 aa19.75■□□□□ 0.75
CSF1R-207ENST00000515068 NUP160Q12769 1436 aa19.74■□□□□ 0.75
CSF1R-207ENST00000515068 EFCAB5A4FU69 1503 aa19.73■□□□□ 0.75
CSF1R-207ENST00000515068 KIAA0586Q9BVV6 1533 aa19.71■□□□□ 0.75
CSF1R-207ENST00000515068 UGGT2Q9NYU1 1516 aa19.7■□□□□ 0.74
CSF1R-207ENST00000515068 FHOD3Q2V2M9 1422 aa19.69■□□□□ 0.74
CSF1R-207ENST00000515068 CHMP7Q8WUX9 453 aaPredicted RBP19.68■□□□□ 0.74
CSF1R-207ENST00000515068 PPARGC1BQ86YN6 1023 aaKnown RBP19.67■□□□□ 0.74
CSF1R-207ENST00000515068 P3H3Q8IVL6 736 aa19.66■□□□□ 0.74
CSF1R-207ENST00000515068 PCF11O94913 1555 aaKnown RBP19.63■□□□□ 0.73
CSF1R-207ENST00000515068 DISP1Q96F81 1524 aa19.63■□□□□ 0.73
CSF1R-207ENST00000515068 FBLN2P98095 1184 aa19.62■□□□□ 0.73
CSF1R-207ENST00000515068 KIAA0556O60303 1618 aa19.59■□□□□ 0.73
CSF1R-207ENST00000515068 OSCARQ8IYS5 282 aa19.59■□□□□ 0.73
CSF1R-207ENST00000515068 LRRIQ1Q96JM4 1722 aa19.58■□□□□ 0.72
CSF1R-207ENST00000515068 CASKIN1Q8WXD9 1431 aa19.53■□□□□ 0.72
CSF1R-207ENST00000515068 SHROOM2Q13796 1616 aa19.53■□□□□ 0.72
CSF1R-207ENST00000515068 CLASP1Q7Z460 1538 aa19.52■□□□□ 0.72
CSF1R-207ENST00000515068 CFAP43Q8NDM7 1665 aa19.52■□□□□ 0.71
CSF1R-207ENST00000515068 KANK4Q5T7N3 995 aaPredicted RBP19.51■□□□□ 0.71
CSF1R-207ENST00000515068 FYCO1Q9BQS8 1478 aa19.51■□□□□ 0.71
CSF1R-207ENST00000515068 TIAM1Q13009 1591 aa19.51■□□□□ 0.71
CSF1R-207ENST00000515068 TRIM26Q12899 539 aaPredicted RBP19.5■□□□□ 0.71
CSF1R-207ENST00000515068 MAP3K1Q13233 1512 aa19.5■□□□□ 0.71
CSF1R-207ENST00000515068 FMN1Q68DA7 1419 aa19.5■□□□□ 0.71
CSF1R-207ENST00000515068 JPH4Q96JJ6 628 aa19.49■□□□□ 0.71
CSF1R-207ENST00000515068 PCGF6Q9BYE7 350 aa19.49■□□□□ 0.71
CSF1R-207ENST00000515068 TTBK1Q5TCY1 1321 aaPredicted RBP19.48■□□□□ 0.71
CSF1R-207ENST00000515068 ERCC6L2Q5T890 1561 aa19.44■□□□□ 0.7
CSF1R-207ENST00000515068 PRG4Q92954 1404 aaPredicted RBP19.4■□□□□ 0.7
CSF1R-207ENST00000515068 LRRC9Q6ZRR7 1453 aa19.39■□□□□ 0.69
CSF1R-207ENST00000515068 HECW1Q76N89 1606 aa19.37■□□□□ 0.69
CSF1R-207ENST00000515068 RAPGEF6Q8TEU7 1601 aa19.37■□□□□ 0.69
CSF1R-207ENST00000515068 MAGI3Q5TCQ9 1506 aa19.36■□□□□ 0.69
CSF1R-207ENST00000515068 CARMIL2Q6F5E8 1435 aa19.36■□□□□ 0.69
CSF1R-207ENST00000515068 APLP2Q06481 763 aa19.36■□□□□ 0.69
CSF1R-207ENST00000515068 ABCA8O94911 1581 aa19.35■□□□□ 0.69
CSF1R-207ENST00000515068 NUP153P49790 1475 aaKnown RBP19.35■□□□□ 0.69
CSF1R-207ENST00000515068 PLB1Q6P1J6 1458 aa19.35■□□□□ 0.69
CSF1R-207ENST00000515068 CDK13Q14004 1512 aaKnown RBP19.34■□□□□ 0.69
CSF1R-207ENST00000515068 EPRSP07814 1512 aaKnown RBP19.33■□□□□ 0.68
CSF1R-207ENST00000515068 ATP1B4Q9UN42 357 aaPredicted RBP19.31■□□□□ 0.68
CSF1R-207ENST00000515068 RIMBP3CA6NJZ7 1639 aa19.28■□□□□ 0.68
CSF1R-207ENST00000515068 RIMBP3BA6NNM3 1639 aa19.28■□□□□ 0.68
CSF1R-207ENST00000515068 RIMBP3Q9UFD9 1639 aa19.28■□□□□ 0.68
CSF1R-207ENST00000515068 CCDC18Q5T9S5 1454 aa19.28■□□□□ 0.68
CSF1R-207ENST00000515068 PHLDB1Q86UU1 1377 aa19.24■□□□□ 0.67
CSF1R-207ENST00000515068 PTPRGP23470 1445 aa19.24■□□□□ 0.67
CSF1R-207ENST00000515068 ARHGEF11O15085 1522 aa19.23■□□□□ 0.67
CSF1R-207ENST00000515068 EHBP1L1Q8N3D4 1523 aa19.23■□□□□ 0.67
CSF1R-207ENST00000515068 RRBP1Q9P2E9 1410 aaKnown RBP19.23■□□□□ 0.67
CSF1R-207ENST00000515068 ARID3CA6NKF2 412 aa19.21■□□□□ 0.67
CSF1R-207ENST00000515068 ATP10BO94823 1461 aa19.19■□□□□ 0.66
CSF1R-207ENST00000515068 SUPT6HQ7KZ85 1726 aaKnown RBP19.17■□□□□ 0.66
CSF1R-207ENST00000515068 NCOA2Q15596 1464 aa19.17■□□□□ 0.66
CSF1R-207ENST00000515068 CYB5RLQ6IPT4 315 aa19.16■□□□□ 0.66
CSF1R-207ENST00000515068 MTUS2Q5JR59 1369 aa19.16■□□□□ 0.66
CSF1R-207ENST00000515068 UACAQ9BZF9 1416 aa19.16■□□□□ 0.66
CSF1R-207ENST00000515068 ABCC2Q92887 1545 aa19.14■□□□□ 0.65
CSF1R-207ENST00000515068 ADCY10Q96PN6 1610 aa19.11■□□□□ 0.65
CSF1R-207ENST00000515068 KIF14Q15058 1648 aa19.11■□□□□ 0.65
CSF1R-207ENST00000515068 UHRF1BP1LA0JNW5 1464 aa19.1■□□□□ 0.65
CSF1R-207ENST00000515068 CCNB3Q8WWL7 1395 aa19.1■□□□□ 0.65
CSF1R-207ENST00000515068 TROQ12816 1431 aaPredicted RBP19.08■□□□□ 0.65
CSF1R-207ENST00000515068 FGD6Q6ZV73 1430 aa19.07■□□□□ 0.64
CSF1R-207ENST00000515068 ZCCHC11Q5TAX3 1644 aaKnown RBP19.06■□□□□ 0.64
CSF1R-207ENST00000515068 MYOM3Q5VTT5 1437 aa19.06■□□□□ 0.64
CSF1R-207ENST00000515068 KDM5BQ9UGL1 1544 aa19.04■□□□□ 0.64
CSF1R-207ENST00000515068 HNRNPUL2Q1KMD3 747 aaKnown RBP19.02■□□□□ 0.64
CSF1R-207ENST00000515068 ABCC10Q5T3U5 1492 aa19.02■□□□□ 0.63
CSF1R-207ENST00000515068 PTPN23Q9H3S7 1636 aa19■□□□□ 0.63
CSF1R-207ENST00000515068 TCOF1Q13428 1488 aaKnown RBP19■□□□□ 0.63
CSF1R-207ENST00000515068 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.99■□□□□ 0.63
CSF1R-207ENST00000515068 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.99■□□□□ 0.63
CSF1R-207ENST00000515068 CDC42BPAQ5VT25 1732 aa18.97■□□□□ 0.63
CSF1R-207ENST00000515068 CDK11AQ9UQ88 783 aaPredicted RBP18.96■□□□□ 0.63
CSF1R-207ENST00000515068 GPATCH8Q9UKJ3 1502 aaKnown RBP18.95■□□□□ 0.62
CSF1R-207ENST00000515068 PTPRKQ15262 1439 aa18.95■□□□□ 0.62
CSF1R-207ENST00000515068 MIA2Q96PC5 1412 aa18.93■□□□□ 0.62
CSF1R-207ENST00000515068 PLEKHD1A6NEE1 506 aa18.93■□□□□ 0.62
CSF1R-207ENST00000515068 TRHP20396 242 aaPredicted RBP18.93■□□□□ 0.62
CSF1R-207ENST00000515068 FAM50AQ14320 339 aaKnown RBP18.92■□□□□ 0.62
CSF1R-207ENST00000515068 TTC37Q6PGP7 1564 aa18.92■□□□□ 0.62
CSF1R-207ENST00000515068 ITSN2Q9NZM3 1697 aa18.92■□□□□ 0.62
CSF1R-207ENST00000515068 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.9■□□□□ 0.62
CSF1R-207ENST00000515068 CDC42BPBQ9Y5S2 1711 aa18.9■□□□□ 0.62
CSF1R-207ENST00000515068 HRCP23327 699 aa18.89■□□□□ 0.61
CSF1R-207ENST00000515068 ZNF644Q9H582 1327 aaPredicted RBP18.88■□□□□ 0.61
CSF1R-207ENST00000515068 ITGAEP38570 1179 aa18.87■□□□□ 0.61
CSF1R-207ENST00000515068 PREX2Q70Z35 1606 aa18.86■□□□□ 0.61
CSF1R-207ENST00000515068 CAMSAP2Q08AD1 1489 aa18.84■□□□□ 0.61
CSF1R-207ENST00000515068 DNMT1P26358 1616 aaKnown RBP18.83■□□□□ 0.61
CSF1R-207ENST00000515068 WDR7Q9Y4E6 1490 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms