RNA–Protein interactions for RNA: ENST00000514588.1

CCND3-221, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-221ENST00000514588 KIF27Q86VH2 1401 aa42.13■■■■■ 4.34
CCND3-221ENST00000514588 CUL7Q14999 1698 aa42■■■■■ 4.31
CCND3-221ENST00000514588 KIAA0586Q9BVV6 1533 aa41.96■■■■■ 4.31
CCND3-221ENST00000514588 CARMIL1Q5VZK9 1371 aa41.84■■■■■ 4.29
CCND3-221ENST00000514588 KIF13AQ9H1H9 1805 aa41.75■■■■■ 4.27
CCND3-221ENST00000514588 NPM1P06748 294 aaKnown RBP eCLIP41.72■■■■■ 4.27
CCND3-221ENST00000514588 ADCY10Q96PN6 1610 aa41.72■■■■■ 4.27
CCND3-221ENST00000514588 MAPKBP1O60336 1514 aa41.66■■■■■ 4.26
CCND3-221ENST00000514588 ABCC10Q5T3U5 1492 aa41.63■■■■■ 4.25
CCND3-221ENST00000514588 FAM69CQ0P6D2 419 aa41.59■■■■■ 4.25
CCND3-221ENST00000514588 PTPRGP23470 1445 aa41.57■■■■■ 4.25
CCND3-221ENST00000514588 IQGAP2Q13576 1575 aa41.54■■■■■ 4.24
CCND3-221ENST00000514588 CARMIL2Q6F5E8 1435 aa41.53■■■■■ 4.24
CCND3-221ENST00000514588 DIP2BQ9P265 1576 aa41.51■■■■■ 4.24
CCND3-221ENST00000514588 TNIKQ9UKE5 1360 aa41.5■■■■■ 4.23
CCND3-221ENST00000514588 TTBK1Q5TCY1 1321 aaPredicted RBP41.47■■■■■ 4.23
CCND3-221ENST00000514588 AEBP2Q6ZN18 517 aaPredicted RBP41.47■■■■■ 4.23
CCND3-221ENST00000514588 RAPGEF2Q9Y4G8 1499 aa41.46■■■■■ 4.23
CCND3-221ENST00000514588 DISP1Q96F81 1524 aa41.38■■■■■ 4.21
CCND3-221ENST00000514588 ABCC2Q92887 1545 aa41.34■■■■■ 4.21
CCND3-221ENST00000514588 UGGT2Q9NYU1 1516 aa41.31■■■■■ 4.2
CCND3-221ENST00000514588 UHRF1BP1LA0JNW5 1464 aa41.28■■■■■ 4.2
CCND3-221ENST00000514588 UACAQ9BZF9 1416 aa41.26■■■■■ 4.19
CCND3-221ENST00000514588 ASXL2Q76L83 1435 aa41.19■■■■■ 4.18
CCND3-221ENST00000514588 PLB1Q6P1J6 1458 aa41.17■■■■■ 4.18
CCND3-221ENST00000514588 KIAA0556O60303 1618 aa41.17■■■■■ 4.18
CCND3-221ENST00000514588 TSPOAP1O95153 1857 aa41.17■■■■■ 4.18
CCND3-221ENST00000514588 KDM6BO15054 1643 aa41.13■■■■■ 4.17
CCND3-221ENST00000514588 KDM5BQ9UGL1 1544 aa41.09■■■■■ 4.17
CCND3-221ENST00000514588 CTTNBP2Q8WZ74 1663 aa41.07■■■■■ 4.17
CCND3-221ENST00000514588 PRXQ9BXM0 1461 aa41.07■■■■■ 4.16
CCND3-221ENST00000514588 GLI2P10070 1586 aa41.07■■■■■ 4.16
CCND3-221ENST00000514588 ZCCHC11Q5TAX3 1644 aaKnown RBP40.97■■■■■ 4.15
CCND3-221ENST00000514588 GOLGA3Q08378 1498 aa40.96■■■■■ 4.15
CCND3-221ENST00000514588 PPRC1Q5VV67 1664 aaKnown RBP40.95■■■■■ 4.15
CCND3-221ENST00000514588 EPRSP07814 1512 aaKnown RBP40.95■■■■■ 4.15
CCND3-221ENST00000514588 MAP3K4Q9Y6R4 1608 aa40.83■■■■■ 4.13
CCND3-221ENST00000514588 ABCA8O94911 1581 aa40.82■■■■■ 4.12
CCND3-221ENST00000514588 WDR7Q9Y4E6 1490 aa40.8■■■■■ 4.12
CCND3-221ENST00000514588 CSRNP3Q8WYN3 585 aa40.75■■■■■ 4.11
CCND3-221ENST00000514588 KDM4FA0A1W2PPD8 638 aa40.74■■■■■ 4.11
CCND3-221ENST00000514588 COL17A1Q9UMD9 1497 aaPredicted RBP40.72■■■■■ 4.11
CCND3-221ENST00000514588 TEX14Q8IWB6 1497 aa40.71■■■■■ 4.11
CCND3-221ENST00000514588 P3H3Q8IVL6 736 aa40.63■■■■■ 4.09
CCND3-221ENST00000514588 KCNH8Q96L42 1107 aa40.59■■■■■ 4.09
CCND3-221ENST00000514588 EEA1Q15075 1411 aa40.56■■■■■ 4.08
CCND3-221ENST00000514588 CD109Q6YHK3 1445 aa40.55■■■■■ 4.08
CCND3-221ENST00000514588 FAM9AQ8IZU1 332 aaPredicted RBP40.54■■■■■ 4.08
CCND3-221ENST00000514588 SAMD9Q5K651 1589 aa40.53■■■■■ 4.08
CCND3-221ENST00000514588 MAGI3Q5TCQ9 1506 aa40.52■■■■■ 4.08
CCND3-221ENST00000514588 CFAP43Q8NDM7 1665 aa40.51■■■■■ 4.08
CCND3-221ENST00000514588 ARID3CA6NKF2 412 aa40.49■■■■■ 4.07
CCND3-221ENST00000514588 ATP10BO94823 1461 aa40.48■■■■■ 4.07
CCND3-221ENST00000514588 ADGRL1O94910 1474 aa40.42■■■■■ 4.06
CCND3-221ENST00000514588 RAPGEF6Q8TEU7 1601 aa40.36■■■■■ 4.05
CCND3-221ENST00000514588 RANGAP1P46060 587 aaPredicted RBP40.33■■■■■ 4.05
CCND3-221ENST00000514588 FHOD3Q2V2M9 1422 aa40.28■■■■■ 4.04
CCND3-221ENST00000514588 NUP153P49790 1475 aaKnown RBP40.25■■■■■ 4.03
CCND3-221ENST00000514588 KIF21BO75037 1637 aa40.24■■■■■ 4.03
CCND3-221ENST00000514588 ABCA9Q8IUA7 1624 aa40.24■■■■■ 4.03
CCND3-221ENST00000514588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.2■■■■■ 4.03
CCND3-221ENST00000514588 HNRNPUL2Q1KMD3 747 aaKnown RBP40.2■■■■■ 4.03
CCND3-221ENST00000514588 ARAP3Q8WWN8 1544 aa40.2■■■■■ 4.03
CCND3-221ENST00000514588 EFCAB5A4FU69 1503 aa40.13■■■■■ 4.01
CCND3-221ENST00000514588 PHLDB1Q86UU1 1377 aa40.11■■■■■ 4.01
CCND3-221ENST00000514588 CHIC1Q5VXU3 224 aa40.04■■■■■ 4
CCND3-221ENST00000514588 NEO1Q92859 1461 aa40.04■■■■■ 4
CCND3-221ENST00000514588 PLEKHD1A6NEE1 506 aa40.01■■■■■ 4
CCND3-221ENST00000514588 RAPGEF3O95398 923 aa39.98■■■■□ 3.99
CCND3-221ENST00000514588 EHMT2Q96KQ7 1210 aa39.97■■■■□ 3.99
CCND3-221ENST00000514588 UBTFP17480 764 aaKnown RBP39.95■■■■□ 3.99
CCND3-221ENST00000514588 FRMPD1Q5SYB0 1578 aa39.88■■■■□ 3.97
CCND3-221ENST00000514588 CDK13Q14004 1512 aaKnown RBP39.86■■■■□ 3.97
CCND3-221ENST00000514588 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.86■■■■□ 3.976e-7■■□□□ 11.5
CCND3-221ENST00000514588 HECW2Q9P2P5 1572 aa39.84■■■■□ 3.97
CCND3-221ENST00000514588 ARHGAP35Q9NRY4 1499 aa39.81■■■■□ 3.96
CCND3-221ENST00000514588 TTC37Q6PGP7 1564 aa39.8■■■■□ 3.96
CCND3-221ENST00000514588 FANCAO15360 1455 aa39.79■■■■□ 3.96
CCND3-221ENST00000514588 FMN1Q68DA7 1419 aa39.78■■■■□ 3.96
CCND3-221ENST00000514588 AKNAQ7Z591 1439 aa39.78■■■■□ 3.96
CCND3-221ENST00000514588 DENND4BO75064 1496 aaPredicted RBP39.75■■■■□ 3.95
CCND3-221ENST00000514588 CFAP74Q9C0B2 1584 aa39.73■■■■□ 3.95
CCND3-221ENST00000514588 HECW1Q76N89 1606 aa39.7■■■■□ 3.95
CCND3-221ENST00000514588 ATP1B4Q9UN42 357 aaPredicted RBP39.7■■■■□ 3.95
CCND3-221ENST00000514588 RICTORQ6R327 1708 aa39.7■■■■□ 3.95
CCND3-221ENST00000514588 ADAMTSL3P82987 1691 aa39.7■■■■□ 3.95
CCND3-221ENST00000514588 ARHGEF40Q8TER5 1519 aa39.65■■■■□ 3.94
CCND3-221ENST00000514588 ARID4BQ4LE39 1312 aaPredicted RBP39.63■■■■□ 3.93
CCND3-221ENST00000514588 PTPRMP28827 1452 aa39.62■■■■□ 3.93
CCND3-221ENST00000514588 PLCH2O75038 1416 aa39.61■■■■□ 3.93
CCND3-221ENST00000514588 BCORL1Q5H9F3 1711 aa39.6■■■■□ 3.93
CCND3-221ENST00000514588 ZMYM4Q5VZL5 1548 aa39.58■■■■□ 3.93
CCND3-221ENST00000514588 CDK11AQ9UQ88 783 aaPredicted RBP39.57■■■■□ 3.93
CCND3-221ENST00000514588 MADDQ8WXG6 1647 aa39.52■■■■□ 3.92
CCND3-221ENST00000514588 SCAPERQ9BY12 1400 aa39.52■■■■□ 3.92
CCND3-221ENST00000514588 YEATS2Q9ULM3 1422 aa39.5■■■■□ 3.91
CCND3-221ENST00000514588 ZFYVE16Q7Z3T8 1539 aa39.5■■■■□ 3.91
CCND3-221ENST00000514588 TROQ12816 1431 aaPredicted RBP39.49■■■■□ 3.91
CCND3-221ENST00000514588 KIF14Q15058 1648 aa39.49■■■■□ 3.91
CCND3-221ENST00000514588 MAGI2Q86UL8 1455 aa39.49■■■■□ 3.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms