RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 PRG4Q92954 1404 aaPredicted RBP32.28■■■□□ 2.76
LPCAT1-206ENST00000514484 JPH4Q96JJ6 628 aa32.25■■■□□ 2.75
LPCAT1-206ENST00000514484 KIAA0586Q9BVV6 1533 aa32.24■■■□□ 2.75
LPCAT1-206ENST00000514484 RAPGEF2Q9Y4G8 1499 aa32.13■■■□□ 2.73
LPCAT1-206ENST00000514484 TRHP20396 242 aaPredicted RBP32.1■■■□□ 2.73
LPCAT1-206ENST00000514484 IQGAP2Q13576 1575 aa32.09■■■□□ 2.73
LPCAT1-206ENST00000514484 CTTNBP2Q8WZ74 1663 aa31.99■■■□□ 2.71
LPCAT1-206ENST00000514484 PRXQ9BXM0 1461 aa31.95■■■□□ 2.7
LPCAT1-206ENST00000514484 ADCY10Q96PN6 1610 aa31.93■■■□□ 2.7
LPCAT1-206ENST00000514484 CARMIL2Q6F5E8 1435 aa31.89■■■□□ 2.7
LPCAT1-206ENST00000514484 DISP1Q96F81 1524 aa31.87■■■□□ 2.69
LPCAT1-206ENST00000514484 UGGT2Q9NYU1 1516 aa31.87■■■□□ 2.69
LPCAT1-206ENST00000514484 TTBK1Q5TCY1 1321 aaPredicted RBP31.87■■■□□ 2.69
LPCAT1-206ENST00000514484 PTPRGP23470 1445 aa31.83■■■□□ 2.69
LPCAT1-206ENST00000514484 KIAA0556O60303 1618 aa31.82■■■□□ 2.68
LPCAT1-206ENST00000514484 TNIKQ9UKE5 1360 aa31.81■■■□□ 2.68
LPCAT1-206ENST00000514484 CSRNP3Q8WYN3 585 aa31.78■■■□□ 2.68
LPCAT1-206ENST00000514484 KIF13AQ9H1H9 1805 aa31.77■■■□□ 2.68
LPCAT1-206ENST00000514484 EEA1Q15075 1411 aa31.76■■■□□ 2.68
LPCAT1-206ENST00000514484 CHIC1Q5VXU3 224 aa31.75■■■□□ 2.67
LPCAT1-206ENST00000514484 FAM9AQ8IZU1 332 aaPredicted RBP31.74■■■□□ 2.67
LPCAT1-206ENST00000514484 MAPKBP1O60336 1514 aa31.7■■■□□ 2.66
LPCAT1-206ENST00000514484 NPM1P06748 294 aaKnown RBP eCLIP31.69■■■□□ 2.66
LPCAT1-206ENST00000514484 GOLGA3Q08378 1498 aa31.62■■■□□ 2.65
LPCAT1-206ENST00000514484 ABCC2Q92887 1545 aa31.62■■■□□ 2.65
LPCAT1-206ENST00000514484 UACAQ9BZF9 1416 aa31.61■■■□□ 2.65
LPCAT1-206ENST00000514484 DIP2BQ9P265 1576 aa31.6■■■□□ 2.65
LPCAT1-206ENST00000514484 UHRF1BP1LA0JNW5 1464 aa31.59■■■□□ 2.65
LPCAT1-206ENST00000514484 KIF21BO75037 1637 aa31.58■■■□□ 2.65
LPCAT1-206ENST00000514484 ABCC10Q5T3U5 1492 aa31.58■■■□□ 2.65
LPCAT1-206ENST00000514484 FAM69CQ0P6D2 419 aa31.51■■■□□ 2.63
LPCAT1-206ENST00000514484 PLB1Q6P1J6 1458 aa31.51■■■□□ 2.63
LPCAT1-206ENST00000514484 ZCCHC11Q5TAX3 1644 aaKnown RBP31.5■■■□□ 2.63
LPCAT1-206ENST00000514484 SAMD9Q5K651 1589 aa31.49■■■□□ 2.63
LPCAT1-206ENST00000514484 TSPOAP1O95153 1857 aa31.46■■■□□ 2.63
LPCAT1-206ENST00000514484 KDM5BQ9UGL1 1544 aa31.46■■■□□ 2.63
LPCAT1-206ENST00000514484 P3H3Q8IVL6 736 aa31.46■■■□□ 2.63
LPCAT1-206ENST00000514484 ASXL2Q76L83 1435 aa31.46■■■□□ 2.63
LPCAT1-206ENST00000514484 ABCA8O94911 1581 aa31.46■■■□□ 2.63
LPCAT1-206ENST00000514484 EHMT2Q96KQ7 1210 aa31.43■■■□□ 2.62
LPCAT1-206ENST00000514484 RANGAP1P46060 587 aaPredicted RBP31.42■■■□□ 2.62
LPCAT1-206ENST00000514484 FHOD3Q2V2M9 1422 aa31.3■■■□□ 2.6
LPCAT1-206ENST00000514484 GLI2P10070 1586 aa31.29■■■□□ 2.6
LPCAT1-206ENST00000514484 EPRSP07814 1512 aaKnown RBP31.27■■■□□ 2.6
LPCAT1-206ENST00000514484 RAPGEF6Q8TEU7 1601 aa31.26■■■□□ 2.59
LPCAT1-206ENST00000514484 WDR7Q9Y4E6 1490 aa31.26■■■□□ 2.59
LPCAT1-206ENST00000514484 PPRC1Q5VV67 1664 aaKnown RBP31.25■■■□□ 2.59
LPCAT1-206ENST00000514484 UBTFP17480 764 aaKnown RBP31.25■■■□□ 2.59
LPCAT1-206ENST00000514484 EFCAB5A4FU69 1503 aa31.24■■■□□ 2.59
LPCAT1-206ENST00000514484 ARID3CA6NKF2 412 aa31.24■■■□□ 2.59
LPCAT1-206ENST00000514484 MAP3K4Q9Y6R4 1608 aa31.21■■■□□ 2.59
LPCAT1-206ENST00000514484 KDM6BO15054 1643 aa31.17■■■□□ 2.58
LPCAT1-206ENST00000514484 ATP10BO94823 1461 aa31.15■■■□□ 2.58
LPCAT1-206ENST00000514484 NUP153P49790 1475 aaKnown RBP31.11■■■□□ 2.57
LPCAT1-206ENST00000514484 KCNH8Q96L42 1107 aa31.07■■■□□ 2.56
LPCAT1-206ENST00000514484 ARHGAP35Q9NRY4 1499 aa31.07■■■□□ 2.56
LPCAT1-206ENST00000514484 CFAP43Q8NDM7 1665 aa31.06■■■□□ 2.56
LPCAT1-206ENST00000514484 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.99■■■□□ 2.55
LPCAT1-206ENST00000514484 HNRNPUL2Q1KMD3 747 aaKnown RBP30.99■■■□□ 2.55
LPCAT1-206ENST00000514484 TEX14Q8IWB6 1497 aa30.99■■■□□ 2.55
LPCAT1-206ENST00000514484 CD109Q6YHK3 1445 aa30.96■■■□□ 2.55
LPCAT1-206ENST00000514484 CDK13Q14004 1512 aaKnown RBP30.93■■■□□ 2.54
LPCAT1-206ENST00000514484 ABCA9Q8IUA7 1624 aa30.92■■■□□ 2.54
LPCAT1-206ENST00000514484 FMN1Q68DA7 1419 aa30.91■■■□□ 2.54
LPCAT1-206ENST00000514484 COL17A1Q9UMD9 1497 aaPredicted RBP30.91■■■□□ 2.54
LPCAT1-206ENST00000514484 MAGI3Q5TCQ9 1506 aa30.91■■■□□ 2.54
LPCAT1-206ENST00000514484 HECW1Q76N89 1606 aa30.9■■■□□ 2.54
LPCAT1-206ENST00000514484 LRRIQ1Q96JM4 1722 aa30.84■■■□□ 2.53
LPCAT1-206ENST00000514484 ATP1B4Q9UN42 357 aaPredicted RBP30.83■■■□□ 2.53
LPCAT1-206ENST00000514484 PCF11O94913 1555 aaKnown RBP30.79■■■□□ 2.52
LPCAT1-206ENST00000514484 PLEKHD1A6NEE1 506 aa30.78■■■□□ 2.52
LPCAT1-206ENST00000514484 CLIP1P30622 1438 aa30.76■■■□□ 2.51
LPCAT1-206ENST00000514484 TTC37Q6PGP7 1564 aa30.75■■■□□ 2.51
LPCAT1-206ENST00000514484 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.73■■■□□ 2.516e-6■■■■■ 38.2
LPCAT1-206ENST00000514484 AEBP2Q6ZN18 517 aaPredicted RBP30.67■■■□□ 2.5
LPCAT1-206ENST00000514484 CASKIN1Q8WXD9 1431 aa30.65■■■□□ 2.5
LPCAT1-206ENST00000514484 ARAP3Q8WWN8 1544 aa30.65■■■□□ 2.5
LPCAT1-206ENST00000514484 KIF14Q15058 1648 aa30.64■■■□□ 2.5
LPCAT1-206ENST00000514484 NEO1Q92859 1461 aa30.63■■■□□ 2.49
LPCAT1-206ENST00000514484 FYCO1Q9BQS8 1478 aa30.6■■■□□ 2.49
LPCAT1-206ENST00000514484 CFAP74Q9C0B2 1584 aa30.58■■■□□ 2.49
LPCAT1-206ENST00000514484 CCDC18Q5T9S5 1454 aa30.58■■■□□ 2.49
LPCAT1-206ENST00000514484 CEP162Q5TB80 1403 aa30.57■■■□□ 2.48
LPCAT1-206ENST00000514484 MYO5CQ9NQX4 1742 aa30.57■■■□□ 2.48
LPCAT1-206ENST00000514484 FRMPD1Q5SYB0 1578 aa30.57■■■□□ 2.48
LPCAT1-206ENST00000514484 TROQ12816 1431 aaPredicted RBP30.56■■■□□ 2.48
LPCAT1-206ENST00000514484 CDK11AQ9UQ88 783 aaPredicted RBP30.56■■■□□ 2.48
LPCAT1-206ENST00000514484 FANCAO15360 1455 aa30.56■■■□□ 2.48
LPCAT1-206ENST00000514484 PHLDB1Q86UU1 1377 aa30.55■■■□□ 2.48
LPCAT1-206ENST00000514484 KDM4FA0A1W2PPD8 638 aa30.53■■■□□ 2.48
LPCAT1-206ENST00000514484 RAPGEF3O95398 923 aa30.51■■■□□ 2.47
LPCAT1-206ENST00000514484 AKNAQ7Z591 1439 aa30.5■■■□□ 2.47
LPCAT1-206ENST00000514484 LOC105371045A0A1W2PR82 267 aa30.5■■■□□ 2.47
LPCAT1-206ENST00000514484 RICTORQ6R327 1708 aa30.5■■■□□ 2.47
LPCAT1-206ENST00000514484 ADGRL1O94910 1474 aa30.5■■■□□ 2.47
LPCAT1-206ENST00000514484 PLCH2O75038 1416 aa30.47■■■□□ 2.47
LPCAT1-206ENST00000514484 DENND4BO75064 1496 aaPredicted RBP30.44■■■□□ 2.46
LPCAT1-206ENST00000514484 CDC42BPBQ9Y5S2 1711 aa30.41■■■□□ 2.46
LPCAT1-206ENST00000514484 ARHGAP5Q13017 1502 aa30.39■■■□□ 2.46
LPCAT1-206ENST00000514484 PREX2Q70Z35 1606 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms