RNA–Protein interactions for RNA: ENST00000514434.1

DDR1-275, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-275ENST00000514434 CARMIL1Q5VZK9 1371 aa22.32■■□□□ 1.16
DDR1-275ENST00000514434 PRG4Q92954 1404 aaPredicted RBP22.31■■□□□ 1.16
DDR1-275ENST00000514434 RUSC2Q8N2Y8 1516 aa22.29■■□□□ 1.16
DDR1-275ENST00000514434 KIAA0586Q9BVV6 1533 aa22.23■■□□□ 1.15
DDR1-275ENST00000514434 TTBK1Q5TCY1 1321 aaPredicted RBP22.13■■□□□ 1.13
DDR1-275ENST00000514434 RAPGEF2Q9Y4G8 1499 aa22.12■■□□□ 1.13
DDR1-275ENST00000514434 IQGAP2Q13576 1575 aa22.06■■□□□ 1.12
DDR1-275ENST00000514434 NPM1P06748 294 aaKnown RBP eCLIP22.03■■□□□ 1.12
DDR1-275ENST00000514434 CARMIL2Q6F5E8 1435 aa22.03■■□□□ 1.12
DDR1-275ENST00000514434 PTPRGP23470 1445 aa22.01■■□□□ 1.11
DDR1-275ENST00000514434 ADCY10Q96PN6 1610 aa21.98■■□□□ 1.11
DDR1-275ENST00000514434 TNIKQ9UKE5 1360 aa21.98■■□□□ 1.11
DDR1-275ENST00000514434 PRXQ9BXM0 1461 aa21.96■■□□□ 1.11
DDR1-275ENST00000514434 CSRNP3Q8WYN3 585 aa21.94■■□□□ 1.1
DDR1-275ENST00000514434 DISP1Q96F81 1524 aa21.94■■□□□ 1.1
DDR1-275ENST00000514434 FAM9AQ8IZU1 332 aaPredicted RBP21.93■■□□□ 1.1
DDR1-275ENST00000514434 UGGT2Q9NYU1 1516 aa21.91■■□□□ 1.1
DDR1-275ENST00000514434 CTTNBP2Q8WZ74 1663 aa21.89■■□□□ 1.1
DDR1-275ENST00000514434 FAM69CQ0P6D2 419 aa21.89■■□□□ 1.09
DDR1-275ENST00000514434 KIAA0556O60303 1618 aa21.86■■□□□ 1.09
DDR1-275ENST00000514434 KIF13AQ9H1H9 1805 aa21.85■■□□□ 1.09
DDR1-275ENST00000514434 MAPKBP1O60336 1514 aa21.85■■□□□ 1.09
DDR1-275ENST00000514434 UACAQ9BZF9 1416 aa21.84■■□□□ 1.09
DDR1-275ENST00000514434 CHIC1Q5VXU3 224 aa21.84■■□□□ 1.09
DDR1-275ENST00000514434 ABCC10Q5T3U5 1492 aa21.83■■□□□ 1.08
DDR1-275ENST00000514434 EEA1Q15075 1411 aa21.81■■□□□ 1.08
DDR1-275ENST00000514434 ABCC2Q92887 1545 aa21.8■■□□□ 1.08
DDR1-275ENST00000514434 GOLGA3Q08378 1498 aa21.79■■□□□ 1.08
DDR1-275ENST00000514434 P3H3Q8IVL6 736 aa21.78■■□□□ 1.08
DDR1-275ENST00000514434 UHRF1BP1LA0JNW5 1464 aa21.77■■□□□ 1.08
DDR1-275ENST00000514434 RANGAP1P46060 587 aaPredicted RBP21.77■■□□□ 1.08
DDR1-275ENST00000514434 DIP2BQ9P265 1576 aa21.77■■□□□ 1.08
DDR1-275ENST00000514434 EHMT2Q96KQ7 1210 aa21.75■■□□□ 1.07
DDR1-275ENST00000514434 ASXL2Q76L83 1435 aa21.74■■□□□ 1.07
DDR1-275ENST00000514434 PLB1Q6P1J6 1458 aa21.72■■□□□ 1.07
DDR1-275ENST00000514434 TSPOAP1O95153 1857 aa21.69■■□□□ 1.06
DDR1-275ENST00000514434 KDM5BQ9UGL1 1544 aa21.68■■□□□ 1.06
DDR1-275ENST00000514434 ZCCHC11Q5TAX3 1644 aaKnown RBP21.66■■□□□ 1.06
DDR1-275ENST00000514434 ARID3CA6NKF2 412 aa21.66■■□□□ 1.06
DDR1-275ENST00000514434 ABCA8O94911 1581 aa21.63■■□□□ 1.05
DDR1-275ENST00000514434 KIF21BO75037 1637 aa21.62■■□□□ 1.05
DDR1-275ENST00000514434 UBTFP17480 764 aaKnown RBP21.61■■□□□ 1.05
DDR1-275ENST00000514434 SAMD9Q5K651 1589 aa21.59■■□□□ 1.05
DDR1-275ENST00000514434 KCNH8Q96L42 1107 aa21.58■■□□□ 1.05
DDR1-275ENST00000514434 EPRSP07814 1512 aaKnown RBP21.58■■□□□ 1.04
DDR1-275ENST00000514434 GLI2P10070 1586 aa21.57■■□□□ 1.04
DDR1-275ENST00000514434 FHOD3Q2V2M9 1422 aa21.55■■□□□ 1.04
DDR1-275ENST00000514434 WDR7Q9Y4E6 1490 aa21.55■■□□□ 1.04
DDR1-275ENST00000514434 KDM6BO15054 1643 aa21.52■■□□□ 1.04
DDR1-275ENST00000514434 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
DDR1-275ENST00000514434 HNRNPUL2Q1KMD3 747 aaKnown RBP21.51■■□□□ 1.03
DDR1-275ENST00000514434 ATP10BO94823 1461 aa21.49■■□□□ 1.03
DDR1-275ENST00000514434 PPRC1Q5VV67 1664 aaKnown RBP21.49■■□□□ 1.03
DDR1-275ENST00000514434 RAPGEF6Q8TEU7 1601 aa21.47■■□□□ 1.03
DDR1-275ENST00000514434 MAP3K4Q9Y6R4 1608 aa21.47■■□□□ 1.03
DDR1-275ENST00000514434 AEBP2Q6ZN18 517 aaPredicted RBP21.46■■□□□ 1.03
DDR1-275ENST00000514434 EFCAB5A4FU69 1503 aa21.45■■□□□ 1.02
DDR1-275ENST00000514434 CD109Q6YHK3 1445 aa21.42■■□□□ 1.02
DDR1-275ENST00000514434 NUP153P49790 1475 aaKnown RBP21.41■■□□□ 1.02
DDR1-275ENST00000514434 TEX14Q8IWB6 1497 aa21.41■■□□□ 1.02
DDR1-275ENST00000514434 ATP1B4Q9UN42 357 aaPredicted RBP21.38■■□□□ 1.01
DDR1-275ENST00000514434 COL17A1Q9UMD9 1497 aaPredicted RBP21.38■■□□□ 1.01
DDR1-275ENST00000514434 CFAP43Q8NDM7 1665 aa21.36■■□□□ 1.01
DDR1-275ENST00000514434 ARHGAP35Q9NRY4 1499 aa21.34■■□□□ 1.01
DDR1-275ENST00000514434 MAGI3Q5TCQ9 1506 aa21.33■■□□□ 1
DDR1-275ENST00000514434 PLEKHD1A6NEE1 506 aa21.32■■□□□ 1
DDR1-275ENST00000514434 FMN1Q68DA7 1419 aa21.28■■□□□ 1
DDR1-275ENST00000514434 CDK13Q14004 1512 aaKnown RBP21.27■■□□□ 1
DDR1-275ENST00000514434 ABCA9Q8IUA7 1624 aa21.26■□□□□ 0.99
DDR1-275ENST00000514434 KDM4FA0A1W2PPD8 638 aa21.21■□□□□ 0.99
DDR1-275ENST00000514434 HECW1Q76N89 1606 aa21.21■□□□□ 0.99
DDR1-275ENST00000514434 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.15■□□□□ 0.98
DDR1-275ENST00000514434 CLIP1P30622 1438 aa21.15■□□□□ 0.98
DDR1-275ENST00000514434 RAPGEF3O95398 923 aa21.15■□□□□ 0.98
DDR1-275ENST00000514434 CDK11AQ9UQ88 783 aaPredicted RBP21.15■□□□□ 0.98
DDR1-275ENST00000514434 ARAP3Q8WWN8 1544 aa21.14■□□□□ 0.98
DDR1-275ENST00000514434 PHLDB1Q86UU1 1377 aa21.13■□□□□ 0.97
DDR1-275ENST00000514434 TTC37Q6PGP7 1564 aa21.13■□□□□ 0.97
DDR1-275ENST00000514434 NEO1Q92859 1461 aa21.13■□□□□ 0.97
DDR1-275ENST00000514434 PCF11O94913 1555 aaKnown RBP21.1■□□□□ 0.97
DDR1-275ENST00000514434 ADGRL1O94910 1474 aa21.1■□□□□ 0.97
DDR1-275ENST00000514434 CASKIN1Q8WXD9 1431 aa21.09■□□□□ 0.97
DDR1-275ENST00000514434 FANCAO15360 1455 aa21.08■□□□□ 0.97
DDR1-275ENST00000514434 LRRIQ1Q96JM4 1722 aa21.08■□□□□ 0.97
DDR1-275ENST00000514434 AKNAQ7Z591 1439 aa21.07■□□□□ 0.96
DDR1-275ENST00000514434 TROQ12816 1431 aaPredicted RBP21.05■□□□□ 0.96
DDR1-275ENST00000514434 KIF14Q15058 1648 aa21.04■□□□□ 0.96
DDR1-275ENST00000514434 LOC105371045A0A1W2PR82 267 aa21.03■□□□□ 0.96
DDR1-275ENST00000514434 PLCH2O75038 1416 aa21.03■□□□□ 0.96
DDR1-275ENST00000514434 DENND4BO75064 1496 aaPredicted RBP21.02■□□□□ 0.96
DDR1-275ENST00000514434 CCDC18Q5T9S5 1454 aa21.01■□□□□ 0.95
DDR1-275ENST00000514434 FRMPD1Q5SYB0 1578 aa21.01■□□□□ 0.95
DDR1-275ENST00000514434 CFAP74Q9C0B2 1584 aa21.01■□□□□ 0.95
DDR1-275ENST00000514434 FYCO1Q9BQS8 1478 aa21.01■□□□□ 0.95
DDR1-275ENST00000514434 CEP162Q5TB80 1403 aa20.99■□□□□ 0.95
DDR1-275ENST00000514434 EFCAB2Q5VUJ9 269 aa20.99■□□□□ 0.95
DDR1-275ENST00000514434 MYO5CQ9NQX4 1742 aa20.98■□□□□ 0.95
DDR1-275ENST00000514434 SCAPERQ9BY12 1400 aa20.96■□□□□ 0.95
DDR1-275ENST00000514434 ARID4BQ4LE39 1312 aaPredicted RBP20.96■□□□□ 0.95
DDR1-275ENST00000514434 RICTORQ6R327 1708 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms