RNA–Protein interactions for RNA: ENST00000514213.6

USO1-204, Transcript of USO1 vesicle transport factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USO1, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USO1-204ENST00000514213 CUX2O14529 1486 aa15.63■□□□□ 0.09
USO1-204ENST00000514213 CHIC2Q9UKJ5 165 aa15.6■□□□□ 0.09
USO1-204ENST00000514213 POLR3GLQ9BT43 218 aa15.59■□□□□ 0.09
USO1-204ENST00000514213 CARMIL1Q5VZK9 1371 aa15.56■□□□□ 0.08
USO1-204ENST00000514213 PRXQ9BXM0 1461 aa15.55■□□□□ 0.08
USO1-204ENST00000514213 TONSLQ96HA7 1378 aa15.55■□□□□ 0.08
USO1-204ENST00000514213 RTN4Q9NQC3 1192 aaKnown RBP15.55■□□□□ 0.08
USO1-204ENST00000514213 SETD5Q9C0A6 1442 aa15.53■□□□□ 0.08
USO1-204ENST00000514213 PRKCSHP14314 528 aaPredicted RBP15.53■□□□□ 0.08
USO1-204ENST00000514213 TOP2BQ02880 1626 aa15.53■□□□□ 0.08
USO1-204ENST00000514213 HNRNPUQ00839 825 aaKnown RBP eCLIP15.53■□□□□ 0.08
USO1-204ENST00000514213 ARHGAP35Q9NRY4 1499 aa15.53■□□□□ 0.08
USO1-204ENST00000514213 RRP7BPQ9NSQ0 103 aa15.52■□□□□ 0.07
USO1-204ENST00000514213 CUX1P39880 1505 aa15.51■□□□□ 0.07
USO1-204ENST00000514213 CDK11AQ9UQ88 783 aaPredicted RBP15.51■□□□□ 0.07
USO1-204ENST00000514213 SENP3-EIF4A1A0A087X0R7 540 aa15.5■□□□□ 0.07
USO1-204ENST00000514213 PHLDB1Q86UU1 1377 aa15.49■□□□□ 0.07
USO1-204ENST00000514213 RRBP1Q9P2E9 1410 aaKnown RBP15.48■□□□□ 0.07
USO1-204ENST00000514213 IGF1RP08069 1367 aa15.48■□□□□ 0.07
USO1-204ENST00000514213 FHOD3Q2V2M9 1422 aa15.47■□□□□ 0.07
USO1-204ENST00000514213 EIF5BO60841 1220 aaKnown RBP15.46■□□□□ 0.07
USO1-204ENST00000514213 PEG3Q9GZU2 1588 aa15.46■□□□□ 0.07
USO1-204ENST00000514213 MTUS2Q5JR59 1369 aa15.46■□□□□ 0.07
USO1-204ENST00000514213 CCDC136Q96JN2 1154 aa15.46■□□□□ 0.07
USO1-204ENST00000514213 PPP1R15AO75807 674 aaPredicted RBP15.44■□□□□ 0.06
USO1-204ENST00000514213 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
USO1-204ENST00000514213 ZNF326Q5BKZ1 582 aaKnown RBP15.43■□□□□ 0.06
USO1-204ENST00000514213 FAM9BQ8IZU0 186 aa15.43■□□□□ 0.06
USO1-204ENST00000514213 DEKP35659 375 aaKnown RBP15.41■□□□□ 0.06
USO1-204ENST00000514213 FOXD1Q16676 465 aa15.4■□□□□ 0.06
USO1-204ENST00000514213 ANO8Q9HCE9 1232 aaPredicted RBP15.4■□□□□ 0.06
USO1-204ENST00000514213 WDR97A6NE52 1622 aa15.39■□□□□ 0.05
USO1-204ENST00000514213 RTL5Q5HYW3 569 aaPredicted RBP15.39■□□□□ 0.05
USO1-204ENST00000514213 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.37■□□□□ 0.05
USO1-204ENST00000514213 FHAD1B1AJZ9 1412 aa15.36■□□□□ 0.05
USO1-204ENST00000514213 FGD5Q6ZNL6 1462 aa15.35■□□□□ 0.05
USO1-204ENST00000514213 LRRC9Q6ZRR7 1453 aa15.35■□□□□ 0.05
USO1-204ENST00000514213 NCAPD3P42695 1498 aa15.34■□□□□ 0.05
USO1-204ENST00000514213 CADPSQ9ULU8 1353 aa15.34■□□□□ 0.05
USO1-204ENST00000514213 MSH5O43196 834 aa15.33■□□□□ 0.05
USO1-204ENST00000514213 RAD54L2Q9Y4B4 1467 aa15.33■□□□□ 0.05
USO1-204ENST00000514213 CFTRP13569 1480 aa15.33■□□□□ 0.04
USO1-204ENST00000514213 TDRD9Q8NDG6 1382 aaKnown RBP15.32■□□□□ 0.04
USO1-204ENST00000514213 NPM2Q86SE8 214 aaKnown RBP15.32■□□□□ 0.04
USO1-204ENST00000514213 BIVM-ERCC5R4GMW8 1640 aa15.32■□□□□ 0.04
USO1-204ENST00000514213 MAPKBP1O60336 1514 aa15.3■□□□□ 0.04
USO1-204ENST00000514213 HSPA5P11021 654 aaKnown RBP15.29■□□□□ 0.04
USO1-204ENST00000514213 MRS2Q9HD23 443 aa15.29■□□□□ 0.04
USO1-204ENST00000514213 TIAM1Q13009 1591 aa15.29■□□□□ 0.04
USO1-204ENST00000514213 ZNF777Q9ULD5 760 aaPredicted RBP15.28■□□□□ 0.04
USO1-204ENST00000514213 CCER2I3L3R5 266 aa15.28■□□□□ 0.04
USO1-204ENST00000514213 EIF4G2P78344 907 aaKnown RBP eCLIP15.27■□□□□ 0.03
USO1-204ENST00000514213 B4GALNT3Q6L9W6 998 aa15.25■□□□□ 0.03
USO1-204ENST00000514213 TIMELESSQ9UNS1 1208 aa15.24■□□□□ 0.03
USO1-204ENST00000514213 SALL2Q9Y467 1007 aaPredicted RBP15.21■□□□□ 0.03
USO1-204ENST00000514213 CCDC18Q5T9S5 1454 aa15.21■□□□□ 0.03
USO1-204ENST00000514213 FANCD2Q9BXW9 1451 aa15.21■□□□□ 0.03
USO1-204ENST00000514213 FBLN2P98095 1184 aa15.21■□□□□ 0.02
USO1-204ENST00000514213 CCDC184Q52MB2 194 aa15.2■□□□□ 0.02
USO1-204ENST00000514213 L3MBTL2Q969R5 705 aa15.19■□□□□ 0.02
USO1-204ENST00000514213 SLC4A1APQ9BWU0 796 aaKnown RBP15.19■□□□□ 0.02
USO1-204ENST00000514213 PCF11O94913 1555 aaKnown RBP15.19■□□□□ 0.02
USO1-204ENST00000514213 HMGXB3Q12766 1538 aa15.18■□□□□ 0.02
USO1-204ENST00000514213 FGD6Q6ZV73 1430 aa15.18■□□□□ 0.02
USO1-204ENST00000514213 NESP48681 1621 aa15.17■□□□□ 0.02
USO1-204ENST00000514213 MPHOSPH9Q99550 1183 aa15.15■□□□□ 0.02
USO1-204ENST00000514213 WASHC2AQ641Q2 1341 aa15.15■□□□□ 0.02
USO1-204ENST00000514213 FMN1Q68DA7 1419 aa15.14■□□□□ 0.01
USO1-204ENST00000514213 KDM2AQ9Y2K7 1162 aa15.14■□□□□ 0.01
USO1-204ENST00000514213 LAS1LQ9Y4W2 734 aaKnown RBP15.12■□□□□ 0.01
USO1-204ENST00000514213 PTPRKQ15262 1439 aa15.12■□□□□ 0.01
USO1-204ENST00000514213 ANP32AP39687 249 aaKnown RBP15.11■□□□□ 0.01
USO1-204ENST00000514213 CASKIN1Q8WXD9 1431 aa15.1■□□□□ 0.01
USO1-204ENST00000514213 DNAJC5BQ9UF47 199 aa15.1■□□□□ 0.01
USO1-204ENST00000514213 IL27Q8NEV9 243 aa15.1■□□□□ 0.01
USO1-204ENST00000514213 NOP58Q9Y2X3 529 aaKnown RBP15.1■□□□□ 0.01
USO1-204ENST00000514213 ZBTB47Q9UFB7 747 aaPredicted RBP15.09■□□□□ 0.01
USO1-204ENST00000514213 C11orf95C9JLR9 678 aaPredicted RBP15.08■□□□□ 0.01
USO1-204ENST00000514213 UACAQ9BZF9 1416 aa15.08■□□□□ 0.01
USO1-204ENST00000514213 ZNF644Q9H582 1327 aaPredicted RBP15.08■□□□□ 0
USO1-204ENST00000514213 POLA1P09884 1462 aaPredicted RBP15.07■□□□□ 0
USO1-204ENST00000514213 NCOA2Q15596 1464 aa15.07■□□□□ 0
USO1-204ENST00000514213 PPP4R2Q9NY27 417 aa15.07■□□□□ 0
USO1-204ENST00000514213 AQRO60306 1485 aaKnown RBP eCLIP15.06■□□□□ 04e-8■■■■■ 34.1
USO1-204ENST00000514213 PAK3O75914 559 aaPredicted RBP15.06■□□□□ 0
USO1-204ENST00000514213 FYCO1Q9BQS8 1478 aa15.06■□□□□ 0
USO1-204ENST00000514213 PRKRIP1Q9H875 184 aaPredicted RBP15.05■□□□□ 0
USO1-204ENST00000514213 MYOM3Q5VTT5 1437 aa15.04■□□□□ -0
USO1-204ENST00000514213 NAIPQ13075 1403 aa15.04■□□□□ -0
USO1-204ENST00000514213 TMC1Q8TDI8 760 aa15.04■□□□□ -0
USO1-204ENST00000514213 NBPF8Q3BBV2 869 aa15.03■□□□□ -0
USO1-204ENST00000514213 TOPBP1Q92547 1522 aa15.02□□□□□ -0.01
USO1-204ENST00000514213 HFM1A2PYH4 1435 aa15.02□□□□□ -0.01
USO1-204ENST00000514213 MAP3K1Q13233 1512 aa15.02□□□□□ -0.01
USO1-204ENST00000514213 CFDP1Q9UEE9 299 aaPredicted RBP15□□□□□ -0.01
USO1-204ENST00000514213 ARXQ96QS3 562 aa14.99□□□□□ -0.01
USO1-204ENST00000514213 MYT1LQ9UL68 1186 aa14.99□□□□□ -0.01
USO1-204ENST00000514213 DAXXQ9UER7 740 aaPredicted RBP14.98□□□□□ -0.01
USO1-204ENST00000514213 GAPVD1Q14C86 1478 aa14.98□□□□□ -0.01
USO1-204ENST00000514213 CC2D2AQ9P2K1 1620 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms