RNA–Protein interactions for RNA: ENST00000514168.1

SMAD1-212, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-212ENST00000514168 JPH4Q96JJ6 628 aa20.12■□□□□ 0.81
SMAD1-212ENST00000514168 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
SMAD1-212ENST00000514168 ADCY10Q96PN6 1610 aa20.05■□□□□ 0.8
SMAD1-212ENST00000514168 ABCC10Q5T3U5 1492 aa20.04■□□□□ 0.8
SMAD1-212ENST00000514168 MAPKBP1O60336 1514 aa20.03■□□□□ 0.8
SMAD1-212ENST00000514168 DIP2BQ9P265 1576 aa20■□□□□ 0.79
SMAD1-212ENST00000514168 IGF1RP08069 1367 aa19.99■□□□□ 0.79
SMAD1-212ENST00000514168 KIAA0586Q9BVV6 1533 aa19.98■□□□□ 0.79
SMAD1-212ENST00000514168 CUL7Q14999 1698 aa19.95■□□□□ 0.78
SMAD1-212ENST00000514168 FAM69CQ0P6D2 419 aa19.94■□□□□ 0.78
SMAD1-212ENST00000514168 KIF27Q86VH2 1401 aa19.91■□□□□ 0.78
SMAD1-212ENST00000514168 TSPOAP1O95153 1857 aa19.87■□□□□ 0.77
SMAD1-212ENST00000514168 NPM1P06748 294 aaKnown RBP eCLIP19.85■□□□□ 0.77
SMAD1-212ENST00000514168 KDM6BO15054 1643 aa19.83■□□□□ 0.76
SMAD1-212ENST00000514168 CARMIL1Q5VZK9 1371 aa19.82■□□□□ 0.76
SMAD1-212ENST00000514168 PTPRGP23470 1445 aa19.8■□□□□ 0.76
SMAD1-212ENST00000514168 PPRC1Q5VV67 1664 aaKnown RBP19.8■□□□□ 0.76
SMAD1-212ENST00000514168 KDM4FA0A1W2PPD8 638 aa19.78■□□□□ 0.76
SMAD1-212ENST00000514168 ABCC2Q92887 1545 aa19.76■□□□□ 0.75
SMAD1-212ENST00000514168 IQGAP2Q13576 1575 aa19.76■□□□□ 0.75
SMAD1-212ENST00000514168 TNIKQ9UKE5 1360 aa19.75■□□□□ 0.75
SMAD1-212ENST00000514168 DISP1Q96F81 1524 aa19.74■□□□□ 0.75
SMAD1-212ENST00000514168 GLI2P10070 1586 aa19.74■□□□□ 0.75
SMAD1-212ENST00000514168 UHRF1BP1LA0JNW5 1464 aa19.73■□□□□ 0.75
SMAD1-212ENST00000514168 ASXL2Q76L83 1435 aa19.71■□□□□ 0.75
SMAD1-212ENST00000514168 EEA1Q15075 1411 aa19.7■□□□□ 0.74
SMAD1-212ENST00000514168 CARMIL2Q6F5E8 1435 aa19.7■□□□□ 0.74
SMAD1-212ENST00000514168 PLB1Q6P1J6 1458 aa19.68■□□□□ 0.74
SMAD1-212ENST00000514168 UACAQ9BZF9 1416 aa19.67■□□□□ 0.74
SMAD1-212ENST00000514168 UGGT2Q9NYU1 1516 aa19.66■□□□□ 0.74
SMAD1-212ENST00000514168 KDM5BQ9UGL1 1544 aa19.66■□□□□ 0.74
SMAD1-212ENST00000514168 TTBK1Q5TCY1 1321 aaPredicted RBP19.65■□□□□ 0.74
SMAD1-212ENST00000514168 COL17A1Q9UMD9 1497 aaPredicted RBP19.64■□□□□ 0.73
SMAD1-212ENST00000514168 MAP3K4Q9Y6R4 1608 aa19.64■□□□□ 0.73
SMAD1-212ENST00000514168 FAM9AQ8IZU1 332 aaPredicted RBP19.62■□□□□ 0.73
SMAD1-212ENST00000514168 ZCCHC11Q5TAX3 1644 aaKnown RBP19.62■□□□□ 0.73
SMAD1-212ENST00000514168 EPRSP07814 1512 aaKnown RBP19.61■□□□□ 0.73
SMAD1-212ENST00000514168 CSRNP3Q8WYN3 585 aa19.61■□□□□ 0.73
SMAD1-212ENST00000514168 KIAA0556O60303 1618 aa19.61■□□□□ 0.73
SMAD1-212ENST00000514168 RAPGEF2Q9Y4G8 1499 aa19.6■□□□□ 0.73
SMAD1-212ENST00000514168 ADGRL1O94910 1474 aa19.53■□□□□ 0.72
SMAD1-212ENST00000514168 CTTNBP2Q8WZ74 1663 aa19.52■□□□□ 0.72
SMAD1-212ENST00000514168 PRXQ9BXM0 1461 aa19.51■□□□□ 0.71
SMAD1-212ENST00000514168 WDR7Q9Y4E6 1490 aa19.48■□□□□ 0.71
SMAD1-212ENST00000514168 KIF21BO75037 1637 aa19.48■□□□□ 0.71
SMAD1-212ENST00000514168 ABCA8O94911 1581 aa19.48■□□□□ 0.71
SMAD1-212ENST00000514168 TEX14Q8IWB6 1497 aa19.48■□□□□ 0.71
SMAD1-212ENST00000514168 CFAP43Q8NDM7 1665 aa19.43■□□□□ 0.7
SMAD1-212ENST00000514168 MAGI3Q5TCQ9 1506 aa19.41■□□□□ 0.7
SMAD1-212ENST00000514168 GOLGA3Q08378 1498 aa19.38■□□□□ 0.69
SMAD1-212ENST00000514168 CD109Q6YHK3 1445 aa19.36■□□□□ 0.69
SMAD1-212ENST00000514168 HECW2Q9P2P5 1572 aa19.36■□□□□ 0.69
SMAD1-212ENST00000514168 ILDR1Q86SU0 546 aaPredicted RBP19.35■□□□□ 0.69
SMAD1-212ENST00000514168 EHMT2Q96KQ7 1210 aa19.33■□□□□ 0.68
SMAD1-212ENST00000514168 UBTFP17480 764 aaKnown RBP19.29■□□□□ 0.68
SMAD1-212ENST00000514168 ATP10BO94823 1461 aa19.28■□□□□ 0.68
SMAD1-212ENST00000514168 KCNH8Q96L42 1107 aa19.28■□□□□ 0.68
SMAD1-212ENST00000514168 ARAP3Q8WWN8 1544 aa19.27■□□□□ 0.68
SMAD1-212ENST00000514168 SAMD9Q5K651 1589 aa19.25■□□□□ 0.67
SMAD1-212ENST00000514168 ABCA9Q8IUA7 1624 aa19.25■□□□□ 0.67
SMAD1-212ENST00000514168 LOC105371045A0A1W2PR82 267 aa19.23■□□□□ 0.67
SMAD1-212ENST00000514168 ADAMTSL3P82987 1691 aa19.18■□□□□ 0.66
SMAD1-212ENST00000514168 ARID3CA6NKF2 412 aa19.18■□□□□ 0.66
SMAD1-212ENST00000514168 P3H3Q8IVL6 736 aa19.18■□□□□ 0.66
SMAD1-212ENST00000514168 RAPGEF6Q8TEU7 1601 aa19.18■□□□□ 0.66
SMAD1-212ENST00000514168 FRMPD1Q5SYB0 1578 aa19.17■□□□□ 0.66
SMAD1-212ENST00000514168 PHLDB1Q86UU1 1377 aa19.13■□□□□ 0.65
SMAD1-212ENST00000514168 NUP153P49790 1475 aaKnown RBP19.13■□□□□ 0.65
SMAD1-212ENST00000514168 NEO1Q92859 1461 aa19.12■□□□□ 0.65
SMAD1-212ENST00000514168 PTPRMP28827 1452 aa19.09■□□□□ 0.65
SMAD1-212ENST00000514168 BCORL1Q5H9F3 1711 aa19.09■□□□□ 0.65
SMAD1-212ENST00000514168 RAPGEF3O95398 923 aa19.09■□□□□ 0.65
SMAD1-212ENST00000514168 RANGAP1P46060 587 aaPredicted RBP19.09■□□□□ 0.65
SMAD1-212ENST00000514168 EFCAB5A4FU69 1503 aa19.07■□□□□ 0.64
SMAD1-212ENST00000514168 RICTORQ6R327 1708 aa19.05■□□□□ 0.64
SMAD1-212ENST00000514168 FHOD3Q2V2M9 1422 aa19.05■□□□□ 0.64
SMAD1-212ENST00000514168 MADDQ8WXG6 1647 aa19.04■□□□□ 0.64
SMAD1-212ENST00000514168 CEP162Q5TB80 1403 aa19.04■□□□□ 0.64
SMAD1-212ENST00000514168 CLIP1P30622 1438 aa19.03■□□□□ 0.64
SMAD1-212ENST00000514168 ARHGEF40Q8TER5 1519 aa19.01■□□□□ 0.63
SMAD1-212ENST00000514168 SIGLEC1Q9BZZ2 1709 aa19.01■□□□□ 0.63
SMAD1-212ENST00000514168 ARHGAP35Q9NRY4 1499 aa19.01■□□□□ 0.63
SMAD1-212ENST00000514168 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19■□□□□ 0.63
SMAD1-212ENST00000514168 TTC37Q6PGP7 1564 aa18.98■□□□□ 0.63
SMAD1-212ENST00000514168 PCF11O94913 1555 aaKnown RBP18.97■□□□□ 0.63
SMAD1-212ENST00000514168 LMTK3Q96Q04 1460 aa18.97■□□□□ 0.63
SMAD1-212ENST00000514168 AKNAQ7Z591 1439 aa18.96■□□□□ 0.63
SMAD1-212ENST00000514168 DENND4BO75064 1496 aaPredicted RBP18.96■□□□□ 0.63
SMAD1-212ENST00000514168 RIMS1Q86UR5 1692 aaKnown RBP18.95■□□□□ 0.62
SMAD1-212ENST00000514168 ZMYM4Q5VZL5 1548 aa18.95■□□□□ 0.62
SMAD1-212ENST00000514168 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.94■□□□□ 0.62
SMAD1-212ENST00000514168 HNRNPUL2Q1KMD3 747 aaKnown RBP18.94■□□□□ 0.62
SMAD1-212ENST00000514168 FANCAO15360 1455 aa18.94■□□□□ 0.62
SMAD1-212ENST00000514168 CFAP74Q9C0B2 1584 aa18.93■□□□□ 0.62
SMAD1-212ENST00000514168 PLEKHD1A6NEE1 506 aa18.92■□□□□ 0.62
SMAD1-212ENST00000514168 CDK13Q14004 1512 aaKnown RBP18.9■□□□□ 0.62
SMAD1-212ENST00000514168 FBXO41Q8TF61 875 aa18.9■□□□□ 0.62
SMAD1-212ENST00000514168 YEATS2Q9ULM3 1422 aa18.9■□□□□ 0.62
SMAD1-212ENST00000514168 FMN1Q68DA7 1419 aa18.88■□□□□ 0.61
SMAD1-212ENST00000514168 ARID4BQ4LE39 1312 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms