RNA–Protein interactions for RNA: ENST00000513841.1

ARHGEF28-213, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 3

Gene ARHGEF28, Length 710 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-213ENST00000513841 RUSC2Q8N2Y8 1516 aa19.56■□□□□ 0.72
ARHGEF28-213ENST00000513841 KIAA0586Q9BVV6 1533 aa19.56■□□□□ 0.72
ARHGEF28-213ENST00000513841 CUL7Q14999 1698 aa19.55■□□□□ 0.72
ARHGEF28-213ENST00000513841 SHROOM2Q13796 1616 aa19.53■□□□□ 0.72
ARHGEF28-213ENST00000513841 RAPGEF2Q9Y4G8 1499 aa19.48■□□□□ 0.71
ARHGEF28-213ENST00000513841 NPM1P06748 294 aaKnown RBP eCLIP19.46■□□□□ 0.71
ARHGEF28-213ENST00000513841 TTBK1Q5TCY1 1321 aaPredicted RBP19.45■□□□□ 0.7
ARHGEF28-213ENST00000513841 CSRNP3Q8WYN3 585 aa19.43■□□□□ 0.7
ARHGEF28-213ENST00000513841 CARMIL2Q6F5E8 1435 aa19.4■□□□□ 0.7
ARHGEF28-213ENST00000513841 PTPRGP23470 1445 aa19.39■□□□□ 0.69
ARHGEF28-213ENST00000513841 FAM9AQ8IZU1 332 aaPredicted RBP19.36■□□□□ 0.69
ARHGEF28-213ENST00000513841 CHIC1Q5VXU3 224 aa19.35■□□□□ 0.69
ARHGEF28-213ENST00000513841 TNIKQ9UKE5 1360 aa19.34■□□□□ 0.69
ARHGEF28-213ENST00000513841 IQGAP2Q13576 1575 aa19.32■□□□□ 0.68
ARHGEF28-213ENST00000513841 PRXQ9BXM0 1461 aa19.32■□□□□ 0.68
ARHGEF28-213ENST00000513841 FAM69CQ0P6D2 419 aa19.26■□□□□ 0.67
ARHGEF28-213ENST00000513841 EEA1Q15075 1411 aa19.25■□□□□ 0.67
ARHGEF28-213ENST00000513841 DISP1Q96F81 1524 aa19.25■□□□□ 0.67
ARHGEF28-213ENST00000513841 UGGT2Q9NYU1 1516 aa19.24■□□□□ 0.67
ARHGEF28-213ENST00000513841 UACAQ9BZF9 1416 aa19.2■□□□□ 0.66
ARHGEF28-213ENST00000513841 P3H3Q8IVL6 736 aa19.2■□□□□ 0.66
ARHGEF28-213ENST00000513841 ADCY10Q96PN6 1610 aa19.19■□□□□ 0.66
ARHGEF28-213ENST00000513841 GOLGA3Q08378 1498 aa19.17■□□□□ 0.66
ARHGEF28-213ENST00000513841 RANGAP1P46060 587 aaPredicted RBP19.17■□□□□ 0.66
ARHGEF28-213ENST00000513841 ABCC10Q5T3U5 1492 aa19.15■□□□□ 0.66
ARHGEF28-213ENST00000513841 EHMT2Q96KQ7 1210 aa19.13■□□□□ 0.65
ARHGEF28-213ENST00000513841 UHRF1BP1LA0JNW5 1464 aa19.13■□□□□ 0.65
ARHGEF28-213ENST00000513841 MAPKBP1O60336 1514 aa19.13■□□□□ 0.65
ARHGEF28-213ENST00000513841 ABCC2Q92887 1545 aa19.13■□□□□ 0.65
ARHGEF28-213ENST00000513841 CTTNBP2Q8WZ74 1663 aa19.11■□□□□ 0.65
ARHGEF28-213ENST00000513841 KIAA0556O60303 1618 aa19.11■□□□□ 0.65
ARHGEF28-213ENST00000513841 UBTFP17480 764 aaKnown RBP19.11■□□□□ 0.65
ARHGEF28-213ENST00000513841 PLB1Q6P1J6 1458 aa19.07■□□□□ 0.64
ARHGEF28-213ENST00000513841 ASXL2Q76L83 1435 aa19.07■□□□□ 0.64
ARHGEF28-213ENST00000513841 KIF13AQ9H1H9 1805 aa19.04■□□□□ 0.64
ARHGEF28-213ENST00000513841 KDM5BQ9UGL1 1544 aa19.04■□□□□ 0.64
ARHGEF28-213ENST00000513841 ARID3CA6NKF2 412 aa19.02■□□□□ 0.64
ARHGEF28-213ENST00000513841 KCNH8Q96L42 1107 aa19.02■□□□□ 0.64
ARHGEF28-213ENST00000513841 DIP2BQ9P265 1576 aa19.01■□□□□ 0.63
ARHGEF28-213ENST00000513841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.98■□□□□ 0.63
ARHGEF28-213ENST00000513841 HNRNPUL2Q1KMD3 747 aaKnown RBP18.98■□□□□ 0.63
ARHGEF28-213ENST00000513841 KIF21BO75037 1637 aa18.97■□□□□ 0.63
ARHGEF28-213ENST00000513841 ABCA8O94911 1581 aa18.96■□□□□ 0.63
ARHGEF28-213ENST00000513841 EPRSP07814 1512 aaKnown RBP18.93■□□□□ 0.62
ARHGEF28-213ENST00000513841 ZCCHC11Q5TAX3 1644 aaKnown RBP18.92■□□□□ 0.62
ARHGEF28-213ENST00000513841 FHOD3Q2V2M9 1422 aa18.91■□□□□ 0.62
ARHGEF28-213ENST00000513841 GLI2P10070 1586 aa18.91■□□□□ 0.62
ARHGEF28-213ENST00000513841 ATP10BO94823 1461 aa18.9■□□□□ 0.62
ARHGEF28-213ENST00000513841 SAMD9Q5K651 1589 aa18.9■□□□□ 0.62
ARHGEF28-213ENST00000513841 TSPOAP1O95153 1857 aa18.9■□□□□ 0.62
ARHGEF28-213ENST00000513841 WDR7Q9Y4E6 1490 aa18.9■□□□□ 0.62
ARHGEF28-213ENST00000513841 PLEKHD1A6NEE1 506 aa18.87■□□□□ 0.61
ARHGEF28-213ENST00000513841 ATP1B4Q9UN42 357 aaPredicted RBP18.87■□□□□ 0.61
ARHGEF28-213ENST00000513841 AEBP2Q6ZN18 517 aaPredicted RBP18.85■□□□□ 0.61
ARHGEF28-213ENST00000513841 CD109Q6YHK3 1445 aa18.83■□□□□ 0.61
ARHGEF28-213ENST00000513841 EFCAB5A4FU69 1503 aa18.82■□□□□ 0.6
ARHGEF28-213ENST00000513841 RAPGEF6Q8TEU7 1601 aa18.8■□□□□ 0.6
ARHGEF28-213ENST00000513841 TEX14Q8IWB6 1497 aa18.79■□□□□ 0.6
ARHGEF28-213ENST00000513841 KDM6BO15054 1643 aa18.79■□□□□ 0.6
ARHGEF28-213ENST00000513841 NUP153P49790 1475 aaKnown RBP18.78■□□□□ 0.6
ARHGEF28-213ENST00000513841 MAP3K4Q9Y6R4 1608 aa18.76■□□□□ 0.59
ARHGEF28-213ENST00000513841 ARHGAP35Q9NRY4 1499 aa18.76■□□□□ 0.59
ARHGEF28-213ENST00000513841 FMN1Q68DA7 1419 aa18.75■□□□□ 0.59
ARHGEF28-213ENST00000513841 COL17A1Q9UMD9 1497 aaPredicted RBP18.74■□□□□ 0.59
ARHGEF28-213ENST00000513841 MAGI3Q5TCQ9 1506 aa18.74■□□□□ 0.59
ARHGEF28-213ENST00000513841 PPRC1Q5VV67 1664 aaKnown RBP18.73■□□□□ 0.59
ARHGEF28-213ENST00000513841 CDK11AQ9UQ88 783 aaPredicted RBP18.73■□□□□ 0.59
ARHGEF28-213ENST00000513841 CFAP43Q8NDM7 1665 aa18.68■□□□□ 0.58
ARHGEF28-213ENST00000513841 PHLDB1Q86UU1 1377 aa18.66■□□□□ 0.58
ARHGEF28-213ENST00000513841 KDM4FA0A1W2PPD8 638 aa18.64■□□□□ 0.57
ARHGEF28-213ENST00000513841 CLIP1P30622 1438 aa18.63■□□□□ 0.57
ARHGEF28-213ENST00000513841 LOC105371045A0A1W2PR82 267 aa18.62■□□□□ 0.57
ARHGEF28-213ENST00000513841 RAPGEF3O95398 923 aa18.62■□□□□ 0.57
ARHGEF28-213ENST00000513841 CDK13Q14004 1512 aaKnown RBP18.62■□□□□ 0.57
ARHGEF28-213ENST00000513841 ABCA9Q8IUA7 1624 aa18.62■□□□□ 0.57
ARHGEF28-213ENST00000513841 ARAP3Q8WWN8 1544 aa18.58■□□□□ 0.56
ARHGEF28-213ENST00000513841 CASKIN1Q8WXD9 1431 aa18.57■□□□□ 0.56
ARHGEF28-213ENST00000513841 NEO1Q92859 1461 aa18.57■□□□□ 0.56
ARHGEF28-213ENST00000513841 HECW1Q76N89 1606 aa18.56■□□□□ 0.56
ARHGEF28-213ENST00000513841 EFCAB2Q5VUJ9 269 aa18.56■□□□□ 0.56
ARHGEF28-213ENST00000513841 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.54■□□□□ 0.56
ARHGEF28-213ENST00000513841 AKNAQ7Z591 1439 aa18.53■□□□□ 0.56
ARHGEF28-213ENST00000513841 PLCH2O75038 1416 aa18.52■□□□□ 0.56
ARHGEF28-213ENST00000513841 TROQ12816 1431 aaPredicted RBP18.52■□□□□ 0.56
ARHGEF28-213ENST00000513841 FANCAO15360 1455 aa18.51■□□□□ 0.55
ARHGEF28-213ENST00000513841 DENND4BO75064 1496 aaPredicted RBP18.47■□□□□ 0.55
ARHGEF28-213ENST00000513841 CCDC18Q5T9S5 1454 aa18.47■□□□□ 0.55
ARHGEF28-213ENST00000513841 CEP162Q5TB80 1403 aa18.47■□□□□ 0.55
ARHGEF28-213ENST00000513841 TTC37Q6PGP7 1564 aa18.45■□□□□ 0.54
ARHGEF28-213ENST00000513841 FYCO1Q9BQS8 1478 aa18.45■□□□□ 0.54
ARHGEF28-213ENST00000513841 SCAPERQ9BY12 1400 aa18.44■□□□□ 0.54
ARHGEF28-213ENST00000513841 ARID4BQ4LE39 1312 aaPredicted RBP18.44■□□□□ 0.54
ARHGEF28-213ENST00000513841 PCF11O94913 1555 aaKnown RBP18.43■□□□□ 0.54
ARHGEF28-213ENST00000513841 ADGRL1O94910 1474 aa18.43■□□□□ 0.54
ARHGEF28-213ENST00000513841 MYT1LQ9UL68 1186 aa18.4■□□□□ 0.54
ARHGEF28-213ENST00000513841 KIF14Q15058 1648 aa18.4■□□□□ 0.54
ARHGEF28-213ENST00000513841 LRRIQ1Q96JM4 1722 aa18.4■□□□□ 0.54
ARHGEF28-213ENST00000513841 AFAP1Q8N556 730 aa18.39■□□□□ 0.53
ARHGEF28-213ENST00000513841 ZNF777Q9ULD5 760 aaPredicted RBP18.39■□□□□ 0.53
ARHGEF28-213ENST00000513841 CFAP74Q9C0B2 1584 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms