RNA–Protein interactions for RNA: ENST00000513719.1

SNCAIP-218, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 2,303 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-218ENST00000513719 P3H3Q8IVL6 736 aa20.21■□□□□ 0.83
SNCAIP-218ENST00000513719 PBRM1Q86U86 1689 aa20.21■□□□□ 0.83
SNCAIP-218ENST00000513719 CTTNBP2Q8WZ74 1663 aa20.2■□□□□ 0.82
SNCAIP-218ENST00000513719 GRIN2BQ13224 1484 aa20.17■□□□□ 0.82
SNCAIP-218ENST00000513719 FHAD1B1AJZ9 1412 aa20.16■□□□□ 0.82
SNCAIP-218ENST00000513719 FHOD3Q2V2M9 1422 aa20.15■□□□□ 0.82
SNCAIP-218ENST00000513719 ADAMTS12P58397 1594 aa20.14■□□□□ 0.81
SNCAIP-218ENST00000513719 EFCAB5A4FU69 1503 aa20.11■□□□□ 0.81
SNCAIP-218ENST00000513719 EIF4G3O43432 1585 aaKnown RBP20.09■□□□□ 0.81
SNCAIP-218ENST00000513719 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.09■□□□□ 0.81
SNCAIP-218ENST00000513719 PCF11O94913 1555 aaKnown RBP20.06■□□□□ 0.8
SNCAIP-218ENST00000513719 SNAPC4Q5SXM2 1469 aa20.06■□□□□ 0.8
SNCAIP-218ENST00000513719 SAMD9Q5K651 1589 aa20.05■□□□□ 0.8
SNCAIP-218ENST00000513719 TIAM1Q13009 1591 aa20.04■□□□□ 0.8
SNCAIP-218ENST00000513719 MAP3K1Q13233 1512 aa20.04■□□□□ 0.8
SNCAIP-218ENST00000513719 HNRNPUL2Q1KMD3 747 aaKnown RBP20.02■□□□□ 0.79
SNCAIP-218ENST00000513719 ZEB1P37275 1124 aaPredicted RBP20.01■□□□□ 0.79
SNCAIP-218ENST00000513719 CASKIN1Q8WXD9 1431 aa20■□□□□ 0.79
SNCAIP-218ENST00000513719 ATP1B4Q9UN42 357 aaPredicted RBP19.98■□□□□ 0.79
SNCAIP-218ENST00000513719 LRRC9Q6ZRR7 1453 aa19.97■□□□□ 0.79
SNCAIP-218ENST00000513719 FYCO1Q9BQS8 1478 aa19.97■□□□□ 0.79
SNCAIP-218ENST00000513719 IQGAP2Q13576 1575 aa19.97■□□□□ 0.79
SNCAIP-218ENST00000513719 FMN1Q68DA7 1419 aa19.97■□□□□ 0.79
SNCAIP-218ENST00000513719 CCER1Q8TC90 406 aaPredicted RBP19.96■□□□□ 0.79
SNCAIP-218ENST00000513719 GRIN2AQ12879 1464 aa19.95■□□□□ 0.78
SNCAIP-218ENST00000513719 RRBP1Q9P2E9 1410 aaKnown RBP19.95■□□□□ 0.78
SNCAIP-218ENST00000513719 MAGI1Q96QZ7 1491 aaPredicted RBP19.94■□□□□ 0.78
SNCAIP-218ENST00000513719 CFAP43Q8NDM7 1665 aa19.93■□□□□ 0.78
SNCAIP-218ENST00000513719 KIAA0586Q9BVV6 1533 aa19.9■□□□□ 0.78
SNCAIP-218ENST00000513719 SYNJ2O15056 1496 aa19.9■□□□□ 0.78
SNCAIP-218ENST00000513719 CHMP7Q8WUX9 453 aaPredicted RBP19.89■□□□□ 0.77
SNCAIP-218ENST00000513719 UGGT2Q9NYU1 1516 aa19.89■□□□□ 0.77
SNCAIP-218ENST00000513719 PHLDB1Q86UU1 1377 aa19.87■□□□□ 0.77
SNCAIP-218ENST00000513719 CCNB3Q8WWL7 1395 aa19.87■□□□□ 0.77
SNCAIP-218ENST00000513719 LRRIQ1Q96JM4 1722 aa19.86■□□□□ 0.77
SNCAIP-218ENST00000513719 CEP170Q5SW79 1584 aa19.85■□□□□ 0.77
SNCAIP-218ENST00000513719 FBLN2P98095 1184 aa19.85■□□□□ 0.77
SNCAIP-218ENST00000513719 DISP1Q96F81 1524 aa19.83■□□□□ 0.77
SNCAIP-218ENST00000513719 NUP160Q12769 1436 aa19.8■□□□□ 0.76
SNCAIP-218ENST00000513719 KIAA0556O60303 1618 aa19.78■□□□□ 0.76
SNCAIP-218ENST00000513719 ITGAEP38570 1179 aa19.74■□□□□ 0.75
SNCAIP-218ENST00000513719 MTUS2Q5JR59 1369 aa19.74■□□□□ 0.75
SNCAIP-218ENST00000513719 MAGI3Q5TCQ9 1506 aa19.73■□□□□ 0.75
SNCAIP-218ENST00000513719 JPH4Q96JJ6 628 aa19.72■□□□□ 0.75
SNCAIP-218ENST00000513719 EPRSP07814 1512 aaKnown RBP19.71■□□□□ 0.75
SNCAIP-218ENST00000513719 HECW1Q76N89 1606 aa19.7■□□□□ 0.74
SNCAIP-218ENST00000513719 CCDC18Q5T9S5 1454 aa19.69■□□□□ 0.74
SNCAIP-218ENST00000513719 CDK13Q14004 1512 aaKnown RBP19.68■□□□□ 0.74
SNCAIP-218ENST00000513719 ARID3CA6NKF2 412 aa19.68■□□□□ 0.74
SNCAIP-218ENST00000513719 FAM50AQ14320 339 aaKnown RBP19.68■□□□□ 0.74
SNCAIP-218ENST00000513719 NCOA2Q15596 1464 aa19.67■□□□□ 0.74
SNCAIP-218ENST00000513719 EHBP1L1Q8N3D4 1523 aa19.66■□□□□ 0.74
SNCAIP-218ENST00000513719 FGD6Q6ZV73 1430 aa19.64■□□□□ 0.73
SNCAIP-218ENST00000513719 NUP153P49790 1475 aaKnown RBP19.64■□□□□ 0.73
SNCAIP-218ENST00000513719 ARHGEF11O15085 1522 aa19.63■□□□□ 0.73
SNCAIP-218ENST00000513719 DHX57Q6P158 1386 aaKnown RBP19.62■□□□□ 0.73
SNCAIP-218ENST00000513719 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.62■□□□□ 0.73
SNCAIP-218ENST00000513719 SUPT6HQ7KZ85 1726 aaKnown RBP19.61■□□□□ 0.73
SNCAIP-218ENST00000513719 RAPGEF6Q8TEU7 1601 aa19.61■□□□□ 0.73
SNCAIP-218ENST00000513719 PLB1Q6P1J6 1458 aa19.61■□□□□ 0.73
SNCAIP-218ENST00000513719 CHD1O14646 1710 aa19.6■□□□□ 0.73
SNCAIP-218ENST00000513719 MYOM3Q5VTT5 1437 aa19.6■□□□□ 0.73
SNCAIP-218ENST00000513719 CARMIL2Q6F5E8 1435 aa19.6■□□□□ 0.73
SNCAIP-218ENST00000513719 RAB3GAP2Q9H2M9 1393 aa19.57■□□□□ 0.72
SNCAIP-218ENST00000513719 PTPRKQ15262 1439 aa19.54■□□□□ 0.72
SNCAIP-218ENST00000513719 PRG4Q92954 1404 aaPredicted RBP19.54■□□□□ 0.72
SNCAIP-218ENST00000513719 SETD5Q9C0A6 1442 aa19.54■□□□□ 0.72
SNCAIP-218ENST00000513719 PTPN23Q9H3S7 1636 aa19.49■□□□□ 0.71
SNCAIP-218ENST00000513719 ABCA8O94911 1581 aa19.48■□□□□ 0.71
SNCAIP-218ENST00000513719 CLSPNQ9HAW4 1339 aa19.48■□□□□ 0.71
SNCAIP-218ENST00000513719 TCOF1Q13428 1488 aaKnown RBP19.46■□□□□ 0.71
SNCAIP-218ENST00000513719 SHROOM2Q13796 1616 aa19.45■□□□□ 0.7
SNCAIP-218ENST00000513719 CDK11AQ9UQ88 783 aaPredicted RBP19.44■□□□□ 0.7
SNCAIP-218ENST00000513719 PTPRGP23470 1445 aa19.44■□□□□ 0.7
SNCAIP-218ENST00000513719 TROQ12816 1431 aaPredicted RBP19.43■□□□□ 0.7
SNCAIP-218ENST00000513719 MIA2Q96PC5 1412 aa19.43■□□□□ 0.7
SNCAIP-218ENST00000513719 ERCC6L2Q5T890 1561 aa19.43■□□□□ 0.7
SNCAIP-218ENST00000513719 ATP10BO94823 1461 aa19.43■□□□□ 0.7
SNCAIP-218ENST00000513719 MAPKBP1O60336 1514 aa19.41■□□□□ 0.7
SNCAIP-218ENST00000513719 HFM1A2PYH4 1435 aa19.39■□□□□ 0.69
SNCAIP-218ENST00000513719 CLASP1Q7Z460 1538 aa19.38■□□□□ 0.69
SNCAIP-218ENST00000513719 ZNF644Q9H582 1327 aaPredicted RBP19.37■□□□□ 0.69
SNCAIP-218ENST00000513719 NAIPQ13075 1403 aa19.37■□□□□ 0.69
SNCAIP-218ENST00000513719 KIF14Q15058 1648 aa19.37■□□□□ 0.69
SNCAIP-218ENST00000513719 CHIC2Q9UKJ5 165 aa19.35■□□□□ 0.69
SNCAIP-218ENST00000513719 ADCY10Q96PN6 1610 aa19.33■□□□□ 0.69
SNCAIP-218ENST00000513719 GPATCH8Q9UKJ3 1502 aaKnown RBP19.33■□□□□ 0.68
SNCAIP-218ENST00000513719 PLEKHD1A6NEE1 506 aa19.33■□□□□ 0.68
SNCAIP-218ENST00000513719 UACAQ9BZF9 1416 aa19.32■□□□□ 0.68
SNCAIP-218ENST00000513719 RRP7BPQ9NSQ0 103 aa19.31■□□□□ 0.68
SNCAIP-218ENST00000513719 ABCC10Q5T3U5 1492 aa19.28■□□□□ 0.68
SNCAIP-218ENST00000513719 ABCC5O15440 1437 aa19.28■□□□□ 0.68
SNCAIP-218ENST00000513719 CFDP1Q9UEE9 299 aaPredicted RBP19.28■□□□□ 0.68
SNCAIP-218ENST00000513719 DAPK1P53355 1430 aa19.27■□□□□ 0.68
SNCAIP-218ENST00000513719 ZNF316A6NFI3 1004 aaPredicted RBP19.27■□□□□ 0.68
SNCAIP-218ENST00000513719 SIN3AQ96ST3 1273 aa19.26■□□□□ 0.67
SNCAIP-218ENST00000513719 KDM6BO15054 1643 aa19.25■□□□□ 0.67
SNCAIP-218ENST00000513719 DNMT1P26358 1616 aaKnown RBP19.25■□□□□ 0.67
SNCAIP-218ENST00000513719 AKNAQ7Z591 1439 aa19.24■□□□□ 0.67
SNCAIP-218ENST00000513719 CAMSAP2Q08AD1 1489 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms