RNA–Protein interactions for RNA: ENST00000513654.5

EXOSC9-212, Transcript of exosome component 9, humanhuman

TSL 2

Gene EXOSC9, Length 3,882 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-212ENST00000513654 PABPN1Q86U42 306 aaKnown RBP eCLIP9.19□□□□□ -0.94
EXOSC9-212ENST00000513654 SYNJ1O43426 1573 aa9.19□□□□□ -0.94
EXOSC9-212ENST00000513654 DEKP35659 375 aaKnown RBP9.18□□□□□ -0.94
EXOSC9-212ENST00000513654 RRBP1Q9P2E9 1410 aaKnown RBP9.17□□□□□ -0.94
EXOSC9-212ENST00000513654 ATP1B4Q9UN42 357 aaPredicted RBP9.17□□□□□ -0.94
EXOSC9-212ENST00000513654 MYT1LQ9UL68 1186 aa9.15□□□□□ -0.94
EXOSC9-212ENST00000513654 NBR1Q14596 966 aa9.15□□□□□ -0.94
EXOSC9-212ENST00000513654 ARAP1Q96P48 1450 aa9.14□□□□□ -0.95
EXOSC9-212ENST00000513654 WDR97A6NE52 1622 aa9.14□□□□□ -0.95
EXOSC9-212ENST00000513654 SETD5Q9C0A6 1442 aa9.14□□□□□ -0.95
EXOSC9-212ENST00000513654 PRKCSHP14314 528 aaPredicted RBP9.12□□□□□ -0.95
EXOSC9-212ENST00000513654 PPP4R2Q9NY27 417 aa9.11□□□□□ -0.95
EXOSC9-212ENST00000513654 B4GALNT3Q6L9W6 998 aa9.11□□□□□ -0.95
EXOSC9-212ENST00000513654 CUX2O14529 1486 aa9.11□□□□□ -0.95
EXOSC9-212ENST00000513654 MAPKBP1O60336 1514 aa9.11□□□□□ -0.95
EXOSC9-212ENST00000513654 TIMELESSQ9UNS1 1208 aa9.1□□□□□ -0.95
EXOSC9-212ENST00000513654 TONSLQ96HA7 1378 aa9.1□□□□□ -0.95
EXOSC9-212ENST00000513654 NOP58Q9Y2X3 529 aaKnown RBP9.08□□□□□ -0.96
EXOSC9-212ENST00000513654 RTL5Q5HYW3 569 aaPredicted RBP9.07□□□□□ -0.96
EXOSC9-212ENST00000513654 FAM9BQ8IZU0 186 aa9.07□□□□□ -0.96
EXOSC9-212ENST00000513654 P3H3Q8IVL6 736 aa9.06□□□□□ -0.96
EXOSC9-212ENST00000513654 PRXQ9BXM0 1461 aa9.06□□□□□ -0.96
EXOSC9-212ENST00000513654 ERICH6BQ5W0A0 696 aa9.05□□□□□ -0.96
EXOSC9-212ENST00000513654 ANO8Q9HCE9 1232 aaPredicted RBP9.04□□□□□ -0.96
EXOSC9-212ENST00000513654 PAK3O75914 559 aaPredicted RBP9.04□□□□□ -0.96
EXOSC9-212ENST00000513654 ERICH3Q5RHP9 1530 aa9.03□□□□□ -0.96
EXOSC9-212ENST00000513654 SENP3Q9H4L4 574 aaPredicted RBP9.03□□□□□ -0.96
EXOSC9-212ENST00000513654 ARHGAP35Q9NRY4 1499 aa9.03□□□□□ -0.96
EXOSC9-212ENST00000513654 ANP32AP39687 249 aaKnown RBP9.03□□□□□ -0.96
EXOSC9-212ENST00000513654 CNGB1Q14028 1251 aaPredicted RBP9.03□□□□□ -0.96
EXOSC9-212ENST00000513654 PHLDB1Q86UU1 1377 aa9.02□□□□□ -0.96
EXOSC9-212ENST00000513654 KIF27Q86VH2 1401 aa9.02□□□□□ -0.96
EXOSC9-212ENST00000513654 MRS2Q9HD23 443 aa9.01□□□□□ -0.97
EXOSC9-212ENST00000513654 ZBTB47Q9UFB7 747 aaPredicted RBP9.01□□□□□ -0.97
EXOSC9-212ENST00000513654 CCDC184Q52MB2 194 aa9□□□□□ -0.97
EXOSC9-212ENST00000513654 RTN4Q9NQC3 1192 aaKnown RBP9□□□□□ -0.97
EXOSC9-212ENST00000513654 TOP2BQ02880 1626 aa8.99□□□□□ -0.97
EXOSC9-212ENST00000513654 HSPA5P11021 654 aaKnown RBP8.99□□□□□ -0.97
EXOSC9-212ENST00000513654 PPP6R1Q9UPN7 881 aa8.99□□□□□ -0.97
EXOSC9-212ENST00000513654 CCDC136Q96JN2 1154 aa8.98□□□□□ -0.97
EXOSC9-212ENST00000513654 ATAD2BQ9ULI0 1458 aa8.98□□□□□ -0.97
EXOSC9-212ENST00000513654 LRRC9Q6ZRR7 1453 aa8.97□□□□□ -0.97
EXOSC9-212ENST00000513654 NPM2Q86SE8 214 aaKnown RBP8.97□□□□□ -0.97
EXOSC9-212ENST00000513654 SALL2Q9Y467 1007 aaPredicted RBP8.97□□□□□ -0.97
EXOSC9-212ENST00000513654 WASHC2AQ641Q2 1341 aa8.96□□□□□ -0.97
EXOSC9-212ENST00000513654 EIF4G2P78344 907 aaKnown RBP eCLIP8.96□□□□□ -0.97
EXOSC9-212ENST00000513654 IPO9Q96P70 1041 aaKnown RBP8.96□□□□□ -0.97
EXOSC9-212ENST00000513654 SENP3-EIF4A1A0A087X0R7 540 aa8.96□□□□□ -0.98
EXOSC9-212ENST00000513654 TIAM1Q13009 1591 aa8.95□□□□□ -0.98
EXOSC9-212ENST00000513654 IL27Q8NEV9 243 aa8.94□□□□□ -0.98
EXOSC9-212ENST00000513654 POLR3GLQ9BT43 218 aa8.94□□□□□ -0.98
EXOSC9-212ENST00000513654 SLC4A1APQ9BWU0 796 aaKnown RBP8.94□□□□□ -0.98
EXOSC9-212ENST00000513654 PRKRIP1Q9H875 184 aaPredicted RBP8.93□□□□□ -0.98
EXOSC9-212ENST00000513654 ZBED9Q6R2W3 1325 aa8.93□□□□□ -0.98
EXOSC9-212ENST00000513654 PEG3Q9GZU2 1588 aa8.92□□□□□ -0.98
EXOSC9-212ENST00000513654 LAS1LQ9Y4W2 734 aaKnown RBP8.92□□□□□ -0.98
EXOSC9-212ENST00000513654 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.91□□□□□ -0.98
EXOSC9-212ENST00000513654 FHAD1B1AJZ9 1412 aa8.91□□□□□ -0.98
EXOSC9-212ENST00000513654 CHIC2Q9UKJ5 165 aa8.91□□□□□ -0.98
EXOSC9-212ENST00000513654 CARMIL1Q5VZK9 1371 aa8.91□□□□□ -0.98
EXOSC9-212ENST00000513654 UNC13AQ9UPW8 1703 aa8.91□□□□□ -0.98
EXOSC9-212ENST00000513654 RRP7BPQ9NSQ0 103 aa8.9□□□□□ -0.98
EXOSC9-212ENST00000513654 CCDC18Q5T9S5 1454 aa8.9□□□□□ -0.98
EXOSC9-212ENST00000513654 NEFMP07197 916 aa8.89□□□□□ -0.99
EXOSC9-212ENST00000513654 IGF1RP08069 1367 aa8.89□□□□□ -0.99
EXOSC9-212ENST00000513654 BIVM-ERCC5R4GMW8 1640 aa8.89□□□□□ -0.99
EXOSC9-212ENST00000513654 CUX1P39880 1505 aa8.89□□□□□ -0.99
EXOSC9-212ENST00000513654 MAP3K1Q13233 1512 aa8.89□□□□□ -0.99
EXOSC9-212ENST00000513654 C11orf95C9JLR9 678 aaPredicted RBP8.88□□□□□ -0.99
EXOSC9-212ENST00000513654 UACAQ9BZF9 1416 aa8.88□□□□□ -0.99
EXOSC9-212ENST00000513654 AKNAQ7Z591 1439 aa8.88□□□□□ -0.99
EXOSC9-212ENST00000513654 CNTLNQ9NXG0 1405 aa8.88□□□□□ -0.99
EXOSC9-212ENST00000513654 MTUS2Q5JR59 1369 aa8.87□□□□□ -0.99
EXOSC9-212ENST00000513654 NUDCQ9Y266 331 aa8.87□□□□□ -0.99
EXOSC9-212ENST00000513654 FHOD3Q2V2M9 1422 aa8.86□□□□□ -0.99
EXOSC9-212ENST00000513654 L3MBTL2Q969R5 705 aa8.86□□□□□ -0.99
EXOSC9-212ENST00000513654 FOXD1Q16676 465 aa8.85□□□□□ -0.99
EXOSC9-212ENST00000513654 BICRAQ9NZM4 1560 aa8.85□□□□□ -0.99
EXOSC9-212ENST00000513654 CCDC7Q96M83 1385 aa8.85□□□□□ -0.99
EXOSC9-212ENST00000513654 EIF5BO60841 1220 aaKnown RBP8.85□□□□□ -0.99
EXOSC9-212ENST00000513654 FGD6Q6ZV73 1430 aa8.85□□□□□ -0.99
EXOSC9-212ENST00000513654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.83□□□□□ -1
EXOSC9-212ENST00000513654 FMN1Q68DA7 1419 aa8.83□□□□□ -1
EXOSC9-212ENST00000513654 HFM1A2PYH4 1435 aa8.83□□□□□ -1
EXOSC9-212ENST00000513654 PTPRKQ15262 1439 aa8.83□□□□□ -1
EXOSC9-212ENST00000513654 AQRO60306 1485 aaKnown RBP eCLIP8.82□□□□□ -13e-6■■■□□ 17.8
EXOSC9-212ENST00000513654 TMC1Q8TDI8 760 aa8.82□□□□□ -1
EXOSC9-212ENST00000513654 ZNF326Q5BKZ1 582 aaKnown RBP8.82□□□□□ -1
EXOSC9-212ENST00000513654 PPM1GO15355 546 aaPredicted RBP8.81□□□□□ -1
EXOSC9-212ENST00000513654 KIF7Q2M1P5 1343 aa8.81□□□□□ -1
EXOSC9-212ENST00000513654 SMG6Q86US8 1419 aaKnown RBP8.81□□□□□ -1
EXOSC9-212ENST00000513654 PCF11O94913 1555 aaKnown RBP8.81□□□□□ -1
EXOSC9-212ENST00000513654 NAIPQ13075 1403 aa8.81□□□□□ -1
EXOSC9-212ENST00000513654 PDE4AP27815 886 aa8.81□□□□□ -1
EXOSC9-212ENST00000513654 MPHOSPH9Q99550 1183 aa8.8□□□□□ -1
EXOSC9-212ENST00000513654 DAXXQ9UER7 740 aaPredicted RBP8.8□□□□□ -1
EXOSC9-212ENST00000513654 USP35Q9P2H5 1018 aa8.8□□□□□ -1
EXOSC9-212ENST00000513654 TCERG1O14776 1098 aaKnown RBP8.8□□□□□ -1
EXOSC9-212ENST00000513654 EXOC6Q8TAG9 804 aa8.8□□□□□ -1
EXOSC9-212ENST00000513654 NBPF8Q3BBV2 869 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms