RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 PBRM1Q86U86 1689 aa12.26□□□□□ -0.45
DDR1-273ENST00000513514 UBTFP17480 764 aaKnown RBP12.25□□□□□ -0.45
DDR1-273ENST00000513514 ERICH3Q5RHP9 1530 aa12.25□□□□□ -0.45
DDR1-273ENST00000513514 BIVM-ERCC5R4GMW8 1640 aa12.24□□□□□ -0.45
DDR1-273ENST00000513514 CCER1Q8TC90 406 aaPredicted RBP12.22□□□□□ -0.45
DDR1-273ENST00000513514 VPS8Q8N3P4 1428 aa12.2□□□□□ -0.46
DDR1-273ENST00000513514 CLIP1P30622 1438 aa12.2□□□□□ -0.46
DDR1-273ENST00000513514 ABCA5Q8WWZ7 1642 aa12.19□□□□□ -0.46
DDR1-273ENST00000513514 CEP170Q5SW79 1584 aa12.18□□□□□ -0.46
DDR1-273ENST00000513514 CLSPNQ9HAW4 1339 aa12.18□□□□□ -0.46
DDR1-273ENST00000513514 KIF13AQ9H1H9 1805 aa12.18□□□□□ -0.46
DDR1-273ENST00000513514 PELP1Q8IZL8 1130 aaKnown RBP12.17□□□□□ -0.46
DDR1-273ENST00000513514 RUSC2Q8N2Y8 1516 aa12.16□□□□□ -0.46
DDR1-273ENST00000513514 GRIN2AQ12879 1464 aa12.16□□□□□ -0.46
DDR1-273ENST00000513514 APLP2Q06481 763 aa12.15□□□□□ -0.46
DDR1-273ENST00000513514 PRXQ9BXM0 1461 aa12.14□□□□□ -0.47
DDR1-273ENST00000513514 ADAMTS12P58397 1594 aa12.14□□□□□ -0.47
DDR1-273ENST00000513514 ILDR1Q86SU0 546 aaPredicted RBP12.13□□□□□ -0.47
DDR1-273ENST00000513514 NUP160Q12769 1436 aa12.12□□□□□ -0.47
DDR1-273ENST00000513514 ABCA10Q8WWZ4 1543 aa12.12□□□□□ -0.47
DDR1-273ENST00000513514 SHROOM2Q13796 1616 aa12.12□□□□□ -0.47
DDR1-273ENST00000513514 KIF27Q86VH2 1401 aa12.11□□□□□ -0.47
DDR1-273ENST00000513514 EHMT2Q96KQ7 1210 aa12.1□□□□□ -0.47
DDR1-273ENST00000513514 KDM4FA0A1W2PPD8 638 aa12.08□□□□□ -0.48
DDR1-273ENST00000513514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.07□□□□□ -0.48
DDR1-273ENST00000513514 RAPGEF2Q9Y4G8 1499 aa12.07□□□□□ -0.48
DDR1-273ENST00000513514 DIP2BQ9P265 1576 aa12.05□□□□□ -0.48
DDR1-273ENST00000513514 MAP3K1Q13233 1512 aa12.05□□□□□ -0.48
DDR1-273ENST00000513514 ABCC10Q5T3U5 1492 aa12.04□□□□□ -0.48
DDR1-273ENST00000513514 CENPBP07199 599 aaPredicted RBP12.04□□□□□ -0.48
DDR1-273ENST00000513514 PRG4Q92954 1404 aaPredicted RBP12.03□□□□□ -0.48
DDR1-273ENST00000513514 FAM69CQ0P6D2 419 aa12.03□□□□□ -0.48
DDR1-273ENST00000513514 KDM6BO15054 1643 aa12.03□□□□□ -0.48
DDR1-273ENST00000513514 DIEXFQ68CQ4 756 aaKnown RBP12.01□□□□□ -0.49
DDR1-273ENST00000513514 FHAD1B1AJZ9 1412 aa12.01□□□□□ -0.49
DDR1-273ENST00000513514 ZNF316A6NFI3 1004 aaPredicted RBP12□□□□□ -0.49
DDR1-273ENST00000513514 MAPKBP1O60336 1514 aa12□□□□□ -0.49
DDR1-273ENST00000513514 ADCY10Q96PN6 1610 aa12□□□□□ -0.49
DDR1-273ENST00000513514 RRBP1Q9P2E9 1410 aaKnown RBP11.97□□□□□ -0.49
DDR1-273ENST00000513514 TSPOAP1O95153 1857 aa11.95□□□□□ -0.5
DDR1-273ENST00000513514 ACIN1Q9UKV3 1341 aaKnown RBP11.93□□□□□ -0.5
DDR1-273ENST00000513514 JPH4Q96JJ6 628 aa11.93□□□□□ -0.5
DDR1-273ENST00000513514 ADGRL1O94910 1474 aa11.92□□□□□ -0.5
DDR1-273ENST00000513514 HECW2Q9P2P5 1572 aa11.91□□□□□ -0.5
DDR1-273ENST00000513514 IGF1RP08069 1367 aa11.9□□□□□ -0.5
DDR1-273ENST00000513514 NPM1P06748 294 aaKnown RBP eCLIP11.88□□□□□ -0.51
DDR1-273ENST00000513514 PPRC1Q5VV67 1664 aaKnown RBP11.87□□□□□ -0.51
DDR1-273ENST00000513514 CARMIL1Q5VZK9 1371 aa11.86□□□□□ -0.51
DDR1-273ENST00000513514 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.86□□□□□ -0.51
DDR1-273ENST00000513514 ARHGAP35Q9NRY4 1499 aa11.86□□□□□ -0.51
DDR1-273ENST00000513514 CCNB3Q8WWL7 1395 aa11.85□□□□□ -0.51
DDR1-273ENST00000513514 TIMELESSQ9UNS1 1208 aa11.85□□□□□ -0.51
DDR1-273ENST00000513514 EFCAB5A4FU69 1503 aa11.85□□□□□ -0.51
DDR1-273ENST00000513514 SCAF1Q9H7N4 1312 aaKnown RBP11.84□□□□□ -0.51
DDR1-273ENST00000513514 COL17A1Q9UMD9 1497 aaPredicted RBP11.83□□□□□ -0.52
DDR1-273ENST00000513514 HNRNPUL2Q1KMD3 747 aaKnown RBP11.83□□□□□ -0.52
DDR1-273ENST00000513514 TTBK1Q5TCY1 1321 aaPredicted RBP11.83□□□□□ -0.52
DDR1-273ENST00000513514 CUL7Q14999 1698 aa11.81□□□□□ -0.52
DDR1-273ENST00000513514 DHX57Q6P158 1386 aaKnown RBP11.81□□□□□ -0.52
DDR1-273ENST00000513514 TIAM1Q13009 1591 aa11.79□□□□□ -0.52
DDR1-273ENST00000513514 ASXL2Q76L83 1435 aa11.79□□□□□ -0.52
DDR1-273ENST00000513514 KIAA0586Q9BVV6 1533 aa11.79□□□□□ -0.52
DDR1-273ENST00000513514 ABCC2Q92887 1545 aa11.78□□□□□ -0.52
DDR1-273ENST00000513514 FYCO1Q9BQS8 1478 aa11.76□□□□□ -0.53
DDR1-273ENST00000513514 GLI2P10070 1586 aa11.76□□□□□ -0.53
DDR1-273ENST00000513514 PTPRGP23470 1445 aa11.76□□□□□ -0.53
DDR1-273ENST00000513514 LRRC9Q6ZRR7 1453 aa11.76□□□□□ -0.53
DDR1-273ENST00000513514 FMN1Q68DA7 1419 aa11.75□□□□□ -0.53
DDR1-273ENST00000513514 NEUROD1Q13562 356 aa11.74□□□□□ -0.53
DDR1-273ENST00000513514 KANK4Q5T7N3 995 aaPredicted RBP11.74□□□□□ -0.53
DDR1-273ENST00000513514 PLB1Q6P1J6 1458 aa11.73□□□□□ -0.53
DDR1-273ENST00000513514 CFAP43Q8NDM7 1665 aa11.73□□□□□ -0.53
DDR1-273ENST00000513514 CASKIN1Q8WXD9 1431 aa11.73□□□□□ -0.53
DDR1-273ENST00000513514 MAP3K4Q9Y6R4 1608 aa11.73□□□□□ -0.53
DDR1-273ENST00000513514 EPRSP07814 1512 aaKnown RBP11.72□□□□□ -0.53
DDR1-273ENST00000513514 SETD5Q9C0A6 1442 aa11.71□□□□□ -0.53
DDR1-273ENST00000513514 MYT1Q01538 1121 aa11.7□□□□□ -0.54
DDR1-273ENST00000513514 UHRF1BP1LA0JNW5 1464 aa11.68□□□□□ -0.54
DDR1-273ENST00000513514 ZCCHC11Q5TAX3 1644 aaKnown RBP11.68□□□□□ -0.54
DDR1-273ENST00000513514 DISP1Q96F81 1524 aa11.66□□□□□ -0.54
DDR1-273ENST00000513514 CTTNBP2Q8WZ74 1663 aa11.66□□□□□ -0.54
DDR1-273ENST00000513514 TEX14Q8IWB6 1497 aa11.66□□□□□ -0.54
DDR1-273ENST00000513514 FBXO41Q8TF61 875 aa11.66□□□□□ -0.54
DDR1-273ENST00000513514 GTF3C3Q9Y5Q9 886 aa11.66□□□□□ -0.54
DDR1-273ENST00000513514 UACAQ9BZF9 1416 aa11.66□□□□□ -0.54
DDR1-273ENST00000513514 IQGAP2Q13576 1575 aa11.66□□□□□ -0.54
DDR1-273ENST00000513514 KDM5BQ9UGL1 1544 aa11.65□□□□□ -0.54
DDR1-273ENST00000513514 CARMIL2Q6F5E8 1435 aa11.65□□□□□ -0.54
DDR1-273ENST00000513514 RAB3GAP2Q9H2M9 1393 aa11.64□□□□□ -0.55
DDR1-273ENST00000513514 RANGAP1P46060 587 aaPredicted RBP11.63□□□□□ -0.55
DDR1-273ENST00000513514 MIER1Q8N108 512 aa11.63□□□□□ -0.55
DDR1-273ENST00000513514 PCF11O94913 1555 aaKnown RBP11.61□□□□□ -0.55
DDR1-273ENST00000513514 SAMD9Q5K651 1589 aa11.61□□□□□ -0.55
DDR1-273ENST00000513514 WDR7Q9Y4E6 1490 aa11.6□□□□□ -0.55
DDR1-273ENST00000513514 CCDC18Q5T9S5 1454 aa11.59□□□□□ -0.55
DDR1-273ENST00000513514 PHLDB1Q86UU1 1377 aa11.59□□□□□ -0.55
DDR1-273ENST00000513514 KIAA0556O60303 1618 aa11.59□□□□□ -0.55
DDR1-273ENST00000513514 AKNAQ7Z591 1439 aa11.57□□□□□ -0.56
DDR1-273ENST00000513514 FGD6Q6ZV73 1430 aa11.56□□□□□ -0.56
DDR1-273ENST00000513514 MAGI3Q5TCQ9 1506 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms