RNA–Protein interactions for RNA: ENST00000513511.5

ABCC3-212, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 5

Gene ABCC3, Length 1,042 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-212ENST00000513511 IGF1RP08069 1367 aa23.9■■□□□ 1.42
ABCC3-212ENST00000513511 CUL7Q14999 1698 aa23.89■■□□□ 1.41
ABCC3-212ENST00000513511 KIAA0586Q9BVV6 1533 aa23.79■■□□□ 1.4
ABCC3-212ENST00000513511 CARMIL1Q5VZK9 1371 aa23.78■■□□□ 1.4
ABCC3-212ENST00000513511 TTBK1Q5TCY1 1321 aaPredicted RBP23.69■■□□□ 1.38
ABCC3-212ENST00000513511 NPM1P06748 294 aaKnown RBP eCLIP23.67■■□□□ 1.38
ABCC3-212ENST00000513511 ADCY10Q96PN6 1610 aa23.65■■□□□ 1.38
ABCC3-212ENST00000513511 KIF13AQ9H1H9 1805 aa23.64■■□□□ 1.38
ABCC3-212ENST00000513511 IQGAP2Q13576 1575 aa23.63■■□□□ 1.37
ABCC3-212ENST00000513511 RAPGEF2Q9Y4G8 1499 aa23.58■■□□□ 1.37
ABCC3-212ENST00000513511 PTPRGP23470 1445 aa23.58■■□□□ 1.36
ABCC3-212ENST00000513511 CARMIL2Q6F5E8 1435 aa23.58■■□□□ 1.36
ABCC3-212ENST00000513511 MAPKBP1O60336 1514 aa23.56■■□□□ 1.36
ABCC3-212ENST00000513511 FAM69CQ0P6D2 419 aa23.56■■□□□ 1.36
ABCC3-212ENST00000513511 ABCC10Q5T3U5 1492 aa23.53■■□□□ 1.36
ABCC3-212ENST00000513511 TNIKQ9UKE5 1360 aa23.52■■□□□ 1.36
ABCC3-212ENST00000513511 DIP2BQ9P265 1576 aa23.51■■□□□ 1.35
ABCC3-212ENST00000513511 DISP1Q96F81 1524 aa23.47■■□□□ 1.35
ABCC3-212ENST00000513511 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
ABCC3-212ENST00000513511 ABCC2Q92887 1545 aa23.43■■□□□ 1.34
ABCC3-212ENST00000513511 UGGT2Q9NYU1 1516 aa23.43■■□□□ 1.34
ABCC3-212ENST00000513511 CTTNBP2Q8WZ74 1663 aa23.42■■□□□ 1.34
ABCC3-212ENST00000513511 CHIC1Q5VXU3 224 aa23.42■■□□□ 1.34
ABCC3-212ENST00000513511 KIAA0556O60303 1618 aa23.41■■□□□ 1.34
ABCC3-212ENST00000513511 TSPOAP1O95153 1857 aa23.41■■□□□ 1.34
ABCC3-212ENST00000513511 UACAQ9BZF9 1416 aa23.39■■□□□ 1.33
ABCC3-212ENST00000513511 UHRF1BP1LA0JNW5 1464 aa23.36■■□□□ 1.33
ABCC3-212ENST00000513511 ASXL2Q76L83 1435 aa23.35■■□□□ 1.33
ABCC3-212ENST00000513511 PRXQ9BXM0 1461 aa23.33■■□□□ 1.33
ABCC3-212ENST00000513511 PLB1Q6P1J6 1458 aa23.3■■□□□ 1.32
ABCC3-212ENST00000513511 KDM6BO15054 1643 aa23.3■■□□□ 1.32
ABCC3-212ENST00000513511 ZCCHC11Q5TAX3 1644 aaKnown RBP23.28■■□□□ 1.32
ABCC3-212ENST00000513511 GOLGA3Q08378 1498 aa23.28■■□□□ 1.32
ABCC3-212ENST00000513511 KDM5BQ9UGL1 1544 aa23.27■■□□□ 1.32
ABCC3-212ENST00000513511 EEA1Q15075 1411 aa23.26■■□□□ 1.31
ABCC3-212ENST00000513511 GLI2P10070 1586 aa23.22■■□□□ 1.31
ABCC3-212ENST00000513511 CSRNP3Q8WYN3 585 aa23.21■■□□□ 1.31
ABCC3-212ENST00000513511 EPRSP07814 1512 aaKnown RBP23.19■■□□□ 1.3
ABCC3-212ENST00000513511 P3H3Q8IVL6 736 aa23.18■■□□□ 1.3
ABCC3-212ENST00000513511 FAM9AQ8IZU1 332 aaPredicted RBP23.18■■□□□ 1.3
ABCC3-212ENST00000513511 PPRC1Q5VV67 1664 aaKnown RBP23.18■■□□□ 1.3
ABCC3-212ENST00000513511 WDR7Q9Y4E6 1490 aa23.15■■□□□ 1.3
ABCC3-212ENST00000513511 ABCA8O94911 1581 aa23.14■■□□□ 1.3
ABCC3-212ENST00000513511 MAP3K4Q9Y6R4 1608 aa23.14■■□□□ 1.29
ABCC3-212ENST00000513511 ARID3CA6NKF2 412 aa23.12■■□□□ 1.29
ABCC3-212ENST00000513511 RANGAP1P46060 587 aaPredicted RBP23.12■■□□□ 1.29
ABCC3-212ENST00000513511 KCNH8Q96L42 1107 aa23.09■■□□□ 1.29
ABCC3-212ENST00000513511 KIF21BO75037 1637 aa23.08■■□□□ 1.28
ABCC3-212ENST00000513511 TEX14Q8IWB6 1497 aa23.07■■□□□ 1.28
ABCC3-212ENST00000513511 SAMD9Q5K651 1589 aa23.05■■□□□ 1.28
ABCC3-212ENST00000513511 COL17A1Q9UMD9 1497 aaPredicted RBP23■■□□□ 1.27
ABCC3-212ENST00000513511 EHMT2Q96KQ7 1210 aa22.99■■□□□ 1.27
ABCC3-212ENST00000513511 CFAP43Q8NDM7 1665 aa22.99■■□□□ 1.27
ABCC3-212ENST00000513511 CD109Q6YHK3 1445 aa22.99■■□□□ 1.27
ABCC3-212ENST00000513511 KDM4FA0A1W2PPD8 638 aa22.97■■□□□ 1.27
ABCC3-212ENST00000513511 RAPGEF6Q8TEU7 1601 aa22.97■■□□□ 1.27
ABCC3-212ENST00000513511 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.96■■□□□ 1.27
ABCC3-212ENST00000513511 HNRNPUL2Q1KMD3 747 aaKnown RBP22.96■■□□□ 1.27
ABCC3-212ENST00000513511 FHOD3Q2V2M9 1422 aa22.96■■□□□ 1.27
ABCC3-212ENST00000513511 ATP10BO94823 1461 aa22.96■■□□□ 1.27
ABCC3-212ENST00000513511 MAGI3Q5TCQ9 1506 aa22.92■■□□□ 1.26
ABCC3-212ENST00000513511 ADGRL1O94910 1474 aa22.86■■□□□ 1.25
ABCC3-212ENST00000513511 NUP153P49790 1475 aaKnown RBP22.86■■□□□ 1.25
ABCC3-212ENST00000513511 UBTFP17480 764 aaKnown RBP22.85■■□□□ 1.25
ABCC3-212ENST00000513511 EFCAB5A4FU69 1503 aa22.84■■□□□ 1.25
ABCC3-212ENST00000513511 ABCA9Q8IUA7 1624 aa22.82■■□□□ 1.24
ABCC3-212ENST00000513511 PLEKHD1A6NEE1 506 aa22.74■■□□□ 1.23
ABCC3-212ENST00000513511 ARAP3Q8WWN8 1544 aa22.73■■□□□ 1.23
ABCC3-212ENST00000513511 ATP1B4Q9UN42 357 aaPredicted RBP22.73■■□□□ 1.23
ABCC3-212ENST00000513511 CDK13Q14004 1512 aaKnown RBP22.71■■□□□ 1.23
ABCC3-212ENST00000513511 NEO1Q92859 1461 aa22.68■■□□□ 1.22
ABCC3-212ENST00000513511 RAPGEF3O95398 923 aa22.68■■□□□ 1.22
ABCC3-212ENST00000513511 ARHGAP35Q9NRY4 1499 aa22.67■■□□□ 1.22
ABCC3-212ENST00000513511 PHLDB1Q86UU1 1377 aa22.67■■□□□ 1.22
ABCC3-212ENST00000513511 FMN1Q68DA7 1419 aa22.65■■□□□ 1.22
ABCC3-212ENST00000513511 TTC37Q6PGP7 1564 aa22.64■■□□□ 1.22
ABCC3-212ENST00000513511 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.64■■□□□ 1.21
ABCC3-212ENST00000513511 HECW1Q76N89 1606 aa22.64■■□□□ 1.21
ABCC3-212ENST00000513511 FRMPD1Q5SYB0 1578 aa22.6■■□□□ 1.21
ABCC3-212ENST00000513511 FANCAO15360 1455 aa22.6■■□□□ 1.21
ABCC3-212ENST00000513511 CFAP74Q9C0B2 1584 aa22.58■■□□□ 1.2
ABCC3-212ENST00000513511 AKNAQ7Z591 1439 aa22.57■■□□□ 1.2
ABCC3-212ENST00000513511 DENND4BO75064 1496 aaPredicted RBP22.55■■□□□ 1.2
ABCC3-212ENST00000513511 ARID4BQ4LE39 1312 aaPredicted RBP22.54■■□□□ 1.2
ABCC3-212ENST00000513511 RICTORQ6R327 1708 aa22.52■■□□□ 1.2
ABCC3-212ENST00000513511 HECW2Q9P2P5 1572 aa22.52■■□□□ 1.2
ABCC3-212ENST00000513511 CLIP1P30622 1438 aa22.51■■□□□ 1.19
ABCC3-212ENST00000513511 CDK11AQ9UQ88 783 aaPredicted RBP22.51■■□□□ 1.19
ABCC3-212ENST00000513511 KIF14Q15058 1648 aa22.49■■□□□ 1.19
ABCC3-212ENST00000513511 LRRIQ1Q96JM4 1722 aa22.49■■□□□ 1.19
ABCC3-212ENST00000513511 ARHGEF40Q8TER5 1519 aa22.49■■□□□ 1.19
ABCC3-212ENST00000513511 MYO5CQ9NQX4 1742 aa22.48■■□□□ 1.19
ABCC3-212ENST00000513511 PCF11O94913 1555 aaKnown RBP22.47■■□□□ 1.19
ABCC3-212ENST00000513511 PLCH2O75038 1416 aa22.47■■□□□ 1.19
ABCC3-212ENST00000513511 LOC105371045A0A1W2PR82 267 aa22.46■■□□□ 1.19
ABCC3-212ENST00000513511 CEP162Q5TB80 1403 aa22.45■■□□□ 1.18
ABCC3-212ENST00000513511 ADAMTSL3P82987 1691 aa22.45■■□□□ 1.18
ABCC3-212ENST00000513511 TROQ12816 1431 aaPredicted RBP22.44■■□□□ 1.18
ABCC3-212ENST00000513511 BCORL1Q5H9F3 1711 aa22.44■■□□□ 1.18
ABCC3-212ENST00000513511 SCAPERQ9BY12 1400 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms