RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 JPH4Q96JJ6 628 aa25.72■■□□□ 1.71
POLR2J3-218ENST00000513506 KIF21BO75037 1637 aa25.72■■□□□ 1.71
POLR2J3-218ENST00000513506 ARHGEF11O15085 1522 aa25.71■■□□□ 1.71
POLR2J3-218ENST00000513506 IQGAP2Q13576 1575 aa25.64■■□□□ 1.69
POLR2J3-218ENST00000513506 RIMBP3CA6NJZ7 1639 aa25.63■■□□□ 1.69
POLR2J3-218ENST00000513506 RIMBP3BA6NNM3 1639 aa25.63■■□□□ 1.69
POLR2J3-218ENST00000513506 RIMBP3Q9UFD9 1639 aa25.63■■□□□ 1.69
POLR2J3-218ENST00000513506 PRG4Q92954 1404 aaPredicted RBP25.6■■□□□ 1.69
POLR2J3-218ENST00000513506 UGGT2Q9NYU1 1516 aa25.59■■□□□ 1.69
POLR2J3-218ENST00000513506 GOLGA3Q08378 1498 aa25.58■■□□□ 1.69
POLR2J3-218ENST00000513506 ARAP1Q96P48 1450 aa25.53■■□□□ 1.68
POLR2J3-218ENST00000513506 ERCC6L2Q5T890 1561 aa25.53■■□□□ 1.68
POLR2J3-218ENST00000513506 CTTNBP2Q8WZ74 1663 aa25.53■■□□□ 1.68
POLR2J3-218ENST00000513506 DISP1Q96F81 1524 aa25.5■■□□□ 1.67
POLR2J3-218ENST00000513506 CARMIL2Q6F5E8 1435 aa25.49■■□□□ 1.67
POLR2J3-218ENST00000513506 UBTFP17480 764 aaKnown RBP25.41■■□□□ 1.66
POLR2J3-218ENST00000513506 CYB5RLQ6IPT4 315 aa25.41■■□□□ 1.66
POLR2J3-218ENST00000513506 TNIKQ9UKE5 1360 aa25.41■■□□□ 1.66
POLR2J3-218ENST00000513506 KIAA0556O60303 1618 aa25.37■■□□□ 1.65
POLR2J3-218ENST00000513506 PTPRGP23470 1445 aa25.36■■□□□ 1.65
POLR2J3-218ENST00000513506 SAMD9Q5K651 1589 aa25.35■■□□□ 1.65
POLR2J3-218ENST00000513506 EFCAB5A4FU69 1503 aa25.31■■□□□ 1.64
POLR2J3-218ENST00000513506 UHRF1BP1LA0JNW5 1464 aa25.24■■□□□ 1.63
POLR2J3-218ENST00000513506 EHMT2Q96KQ7 1210 aa25.24■■□□□ 1.63
POLR2J3-218ENST00000513506 ARHGAP35Q9NRY4 1499 aa25.21■■□□□ 1.63
POLR2J3-218ENST00000513506 UACAQ9BZF9 1416 aa25.2■■□□□ 1.63
POLR2J3-218ENST00000513506 LOC105371045A0A1W2PR82 267 aa25.18■■□□□ 1.62
POLR2J3-218ENST00000513506 P3H3Q8IVL6 736 aa25.15■■□□□ 1.62
POLR2J3-218ENST00000513506 ADCY10Q96PN6 1610 aa25.15■■□□□ 1.62
POLR2J3-218ENST00000513506 ABCA8O94911 1581 aa25.14■■□□□ 1.62
POLR2J3-218ENST00000513506 FHOD3Q2V2M9 1422 aa25.14■■□□□ 1.62
POLR2J3-218ENST00000513506 ABCC2Q92887 1545 aa25.14■■□□□ 1.62
POLR2J3-218ENST00000513506 CLIP1P30622 1438 aa25.12■■□□□ 1.61
POLR2J3-218ENST00000513506 PLB1Q6P1J6 1458 aa25.11■■□□□ 1.61
POLR2J3-218ENST00000513506 RANGAP1P46060 587 aaPredicted RBP25.1■■□□□ 1.61
POLR2J3-218ENST00000513506 KDM5BQ9UGL1 1544 aa25.09■■□□□ 1.61
POLR2J3-218ENST00000513506 FMN1Q68DA7 1419 aa25.08■■□□□ 1.61
POLR2J3-218ENST00000513506 CEP162Q5TB80 1403 aa25.07■■□□□ 1.6
POLR2J3-218ENST00000513506 TTBK1Q5TCY1 1321 aaPredicted RBP25.05■■□□□ 1.6
POLR2J3-218ENST00000513506 NPM1P06748 294 aaKnown RBP eCLIP25.03■■□□□ 1.6
POLR2J3-218ENST00000513506 MAPKBP1O60336 1514 aa25.02■■□□□ 1.6
POLR2J3-218ENST00000513506 RAPGEF6Q8TEU7 1601 aa24.98■■□□□ 1.59
POLR2J3-218ENST00000513506 NUP153P49790 1475 aaKnown RBP24.97■■□□□ 1.59
POLR2J3-218ENST00000513506 ATP10BO94823 1461 aa24.95■■□□□ 1.58
POLR2J3-218ENST00000513506 CASKIN1Q8WXD9 1431 aa24.93■■□□□ 1.58
POLR2J3-218ENST00000513506 ZCCHC11Q5TAX3 1644 aaKnown RBP24.9■■□□□ 1.58
POLR2J3-218ENST00000513506 ASXL2Q76L83 1435 aa24.89■■□□□ 1.58
POLR2J3-218ENST00000513506 ABCC10Q5T3U5 1492 aa24.86■■□□□ 1.57
POLR2J3-218ENST00000513506 FYCO1Q9BQS8 1478 aa24.85■■□□□ 1.57
POLR2J3-218ENST00000513506 HECW1Q76N89 1606 aa24.83■■□□□ 1.57
POLR2J3-218ENST00000513506 EPRSP07814 1512 aaKnown RBP24.83■■□□□ 1.57
POLR2J3-218ENST00000513506 WDR7Q9Y4E6 1490 aa24.82■■□□□ 1.56
POLR2J3-218ENST00000513506 VPS8Q8N3P4 1428 aa24.79■■□□□ 1.56
POLR2J3-218ENST00000513506 PCF11O94913 1555 aaKnown RBP24.79■■□□□ 1.56
POLR2J3-218ENST00000513506 GLI2P10070 1586 aa24.77■■□□□ 1.56
POLR2J3-218ENST00000513506 CCDC18Q5T9S5 1454 aa24.77■■□□□ 1.56
POLR2J3-218ENST00000513506 DIP2BQ9P265 1576 aa24.76■■□□□ 1.55
POLR2J3-218ENST00000513506 CDK13Q14004 1512 aaKnown RBP24.73■■□□□ 1.55
POLR2J3-218ENST00000513506 PLEKHD1A6NEE1 506 aa24.73■■□□□ 1.55
POLR2J3-218ENST00000513506 FAM69CQ0P6D2 419 aa24.72■■□□□ 1.55
POLR2J3-218ENST00000513506 ARID3CA6NKF2 412 aa24.71■■□□□ 1.55
POLR2J3-218ENST00000513506 TRHP20396 242 aaPredicted RBP24.71■■□□□ 1.55
POLR2J3-218ENST00000513506 CDK11AQ9UQ88 783 aaPredicted RBP24.71■■□□□ 1.55
POLR2J3-218ENST00000513506 ATP1B4Q9UN42 357 aaPredicted RBP24.68■■□□□ 1.54
POLR2J3-218ENST00000513506 KIF13AQ9H1H9 1805 aa24.68■■□□□ 1.54
POLR2J3-218ENST00000513506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.67■■□□□ 1.54
POLR2J3-218ENST00000513506 HNRNPUL2Q1KMD3 747 aaKnown RBP24.67■■□□□ 1.54
POLR2J3-218ENST00000513506 LRRIQ1Q96JM4 1722 aa24.66■■□□□ 1.54
POLR2J3-218ENST00000513506 TROQ12816 1431 aaPredicted RBP24.64■■□□□ 1.54
POLR2J3-218ENST00000513506 MAP3K1Q13233 1512 aa24.64■■□□□ 1.53
POLR2J3-218ENST00000513506 KCNH8Q96L42 1107 aa24.61■■□□□ 1.53
POLR2J3-218ENST00000513506 ABCA9Q8IUA7 1624 aa24.59■■□□□ 1.53
POLR2J3-218ENST00000513506 MAP3K4Q9Y6R4 1608 aa24.58■■□□□ 1.53
POLR2J3-218ENST00000513506 MAGI3Q5TCQ9 1506 aa24.57■■□□□ 1.52
POLR2J3-218ENST00000513506 CD109Q6YHK3 1445 aa24.55■■□□□ 1.52
POLR2J3-218ENST00000513506 CFAP43Q8NDM7 1665 aa24.54■■□□□ 1.52
POLR2J3-218ENST00000513506 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.53■■□□□ 1.52
POLR2J3-218ENST00000513506 TIAM1Q13009 1591 aa24.52■■□□□ 1.52
POLR2J3-218ENST00000513506 PPRC1Q5VV67 1664 aaKnown RBP24.48■■□□□ 1.51
POLR2J3-218ENST00000513506 TEX14Q8IWB6 1497 aa24.48■■□□□ 1.51
POLR2J3-218ENST00000513506 MTUS2Q5JR59 1369 aa24.47■■□□□ 1.51
POLR2J3-218ENST00000513506 KIF14Q15058 1648 aa24.46■■□□□ 1.51
POLR2J3-218ENST00000513506 EHBP1L1Q8N3D4 1523 aa24.46■■□□□ 1.51
POLR2J3-218ENST00000513506 ARAP3Q8WWN8 1544 aa24.46■■□□□ 1.51
POLR2J3-218ENST00000513506 PHLDB1Q86UU1 1377 aa24.46■■□□□ 1.51
POLR2J3-218ENST00000513506 LRRC9Q6ZRR7 1453 aa24.45■■□□□ 1.51
POLR2J3-218ENST00000513506 PLCH2O75038 1416 aa24.45■■□□□ 1.51
POLR2J3-218ENST00000513506 TTC37Q6PGP7 1564 aa24.44■■□□□ 1.5
POLR2J3-218ENST00000513506 NEO1Q92859 1461 aa24.41■■□□□ 1.5
POLR2J3-218ENST00000513506 KANK4Q5T7N3 995 aaPredicted RBP24.4■■□□□ 1.5
POLR2J3-218ENST00000513506 APLP2Q06481 763 aa24.38■■□□□ 1.49
POLR2J3-218ENST00000513506 GPATCH8Q9UKJ3 1502 aaKnown RBP24.35■■□□□ 1.49
POLR2J3-218ENST00000513506 FANCAO15360 1455 aa24.33■■□□□ 1.49
POLR2J3-218ENST00000513506 TSPOAP1O95153 1857 aa24.33■■□□□ 1.49
POLR2J3-218ENST00000513506 EFCAB2Q5VUJ9 269 aa24.33■■□□□ 1.49
POLR2J3-218ENST00000513506 NCOA2Q15596 1464 aa24.32■■□□□ 1.48
POLR2J3-218ENST00000513506 COL17A1Q9UMD9 1497 aaPredicted RBP24.32■■□□□ 1.48
POLR2J3-218ENST00000513506 MYO5CQ9NQX4 1742 aa24.3■■□□□ 1.48
POLR2J3-218ENST00000513506 CCNB3Q8WWL7 1395 aa24.29■■□□□ 1.48
POLR2J3-218ENST00000513506 AKNAQ7Z591 1439 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms