RNA–Protein interactions for RNA: ENST00000513436.6

SERF1A-209, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 3 BASIC

Gene SERF1A, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-209ENST00000513436 SHROOM2Q13796 1616 aa20.84■□□□□ 0.93
SERF1A-209ENST00000513436 CARMIL1Q5VZK9 1371 aa20.84■□□□□ 0.93
SERF1A-209ENST00000513436 CUL7Q14999 1698 aa20.81■□□□□ 0.92
SERF1A-209ENST00000513436 KIAA0586Q9BVV6 1533 aa20.79■□□□□ 0.92
SERF1A-209ENST00000513436 NPM1P06748 294 aaKnown RBP eCLIP20.77■□□□□ 0.92
SERF1A-209ENST00000513436 RUSC2Q8N2Y8 1516 aa20.77■□□□□ 0.92
SERF1A-209ENST00000513436 TTBK1Q5TCY1 1321 aaPredicted RBP20.7■□□□□ 0.9
SERF1A-209ENST00000513436 CARMIL2Q6F5E8 1435 aa20.65■□□□□ 0.9
SERF1A-209ENST00000513436 RAPGEF2Q9Y4G8 1499 aa20.63■□□□□ 0.89
SERF1A-209ENST00000513436 PTPRGP23470 1445 aa20.62■□□□□ 0.89
SERF1A-209ENST00000513436 TNIKQ9UKE5 1360 aa20.59■□□□□ 0.89
SERF1A-209ENST00000513436 FAM69CQ0P6D2 419 aa20.58■□□□□ 0.89
SERF1A-209ENST00000513436 IQGAP2Q13576 1575 aa20.58■□□□□ 0.88
SERF1A-209ENST00000513436 ADCY10Q96PN6 1610 aa20.52■□□□□ 0.87
SERF1A-209ENST00000513436 ABCC10Q5T3U5 1492 aa20.48■□□□□ 0.87
SERF1A-209ENST00000513436 MAPKBP1O60336 1514 aa20.48■□□□□ 0.87
SERF1A-209ENST00000513436 DISP1Q96F81 1524 aa20.45■□□□□ 0.86
SERF1A-209ENST00000513436 UGGT2Q9NYU1 1516 aa20.44■□□□□ 0.86
SERF1A-209ENST00000513436 UACAQ9BZF9 1416 aa20.44■□□□□ 0.86
SERF1A-209ENST00000513436 CSRNP3Q8WYN3 585 aa20.44■□□□□ 0.86
SERF1A-209ENST00000513436 FAM9AQ8IZU1 332 aaPredicted RBP20.42■□□□□ 0.86
SERF1A-209ENST00000513436 KIF13AQ9H1H9 1805 aa20.42■□□□□ 0.86
SERF1A-209ENST00000513436 PRXQ9BXM0 1461 aa20.42■□□□□ 0.86
SERF1A-209ENST00000513436 ABCC2Q92887 1545 aa20.42■□□□□ 0.86
SERF1A-209ENST00000513436 AEBP2Q6ZN18 517 aaPredicted RBP20.41■□□□□ 0.86
SERF1A-209ENST00000513436 DIP2BQ9P265 1576 aa20.38■□□□□ 0.85
SERF1A-209ENST00000513436 UHRF1BP1LA0JNW5 1464 aa20.38■□□□□ 0.85
SERF1A-209ENST00000513436 GOLGA3Q08378 1498 aa20.38■□□□□ 0.85
SERF1A-209ENST00000513436 KIAA0556O60303 1618 aa20.36■□□□□ 0.85
SERF1A-209ENST00000513436 PLB1Q6P1J6 1458 aa20.35■□□□□ 0.85
SERF1A-209ENST00000513436 ASXL2Q76L83 1435 aa20.35■□□□□ 0.85
SERF1A-209ENST00000513436 CTTNBP2Q8WZ74 1663 aa20.34■□□□□ 0.85
SERF1A-209ENST00000513436 EEA1Q15075 1411 aa20.32■□□□□ 0.84
SERF1A-209ENST00000513436 P3H3Q8IVL6 736 aa20.31■□□□□ 0.84
SERF1A-209ENST00000513436 KDM5BQ9UGL1 1544 aa20.28■□□□□ 0.84
SERF1A-209ENST00000513436 RANGAP1P46060 587 aaPredicted RBP20.26■□□□□ 0.83
SERF1A-209ENST00000513436 TSPOAP1O95153 1857 aa20.25■□□□□ 0.83
SERF1A-209ENST00000513436 KCNH8Q96L42 1107 aa20.22■□□□□ 0.83
SERF1A-209ENST00000513436 ZCCHC11Q5TAX3 1644 aaKnown RBP20.21■□□□□ 0.83
SERF1A-209ENST00000513436 GLI2P10070 1586 aa20.21■□□□□ 0.83
SERF1A-209ENST00000513436 KDM6BO15054 1643 aa20.2■□□□□ 0.83
SERF1A-209ENST00000513436 EPRSP07814 1512 aaKnown RBP20.2■□□□□ 0.82
SERF1A-209ENST00000513436 ARID3CA6NKF2 412 aa20.19■□□□□ 0.82
SERF1A-209ENST00000513436 WDR7Q9Y4E6 1490 aa20.17■□□□□ 0.82
SERF1A-209ENST00000513436 ABCA8O94911 1581 aa20.16■□□□□ 0.82
SERF1A-209ENST00000513436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.16■□□□□ 0.82
SERF1A-209ENST00000513436 HNRNPUL2Q1KMD3 747 aaKnown RBP20.16■□□□□ 0.82
SERF1A-209ENST00000513436 EHMT2Q96KQ7 1210 aa20.16■□□□□ 0.82
SERF1A-209ENST00000513436 UBTFP17480 764 aaKnown RBP20.13■□□□□ 0.81
SERF1A-209ENST00000513436 TEX14Q8IWB6 1497 aa20.12■□□□□ 0.81
SERF1A-209ENST00000513436 CD109Q6YHK3 1445 aa20.08■□□□□ 0.81
SERF1A-209ENST00000513436 SAMD9Q5K651 1589 aa20.06■□□□□ 0.8
SERF1A-209ENST00000513436 ATP10BO94823 1461 aa20.06■□□□□ 0.8
SERF1A-209ENST00000513436 MAP3K4Q9Y6R4 1608 aa20.06■□□□□ 0.8
SERF1A-209ENST00000513436 PPRC1Q5VV67 1664 aaKnown RBP20.05■□□□□ 0.8
SERF1A-209ENST00000513436 FHOD3Q2V2M9 1422 aa20.04■□□□□ 0.8
SERF1A-209ENST00000513436 KIF21BO75037 1637 aa20.04■□□□□ 0.8
SERF1A-209ENST00000513436 RAPGEF6Q8TEU7 1601 aa20■□□□□ 0.79
SERF1A-209ENST00000513436 COL17A1Q9UMD9 1497 aaPredicted RBP20■□□□□ 0.79
SERF1A-209ENST00000513436 PLEKHD1A6NEE1 506 aa19.99■□□□□ 0.79
SERF1A-209ENST00000513436 MAGI3Q5TCQ9 1506 aa19.98■□□□□ 0.79
SERF1A-209ENST00000513436 KDM4FA0A1W2PPD8 638 aa19.97■□□□□ 0.79
SERF1A-209ENST00000513436 ATP1B4Q9UN42 357 aaPredicted RBP19.97■□□□□ 0.79
SERF1A-209ENST00000513436 CFAP43Q8NDM7 1665 aa19.97■□□□□ 0.79
SERF1A-209ENST00000513436 EFCAB5A4FU69 1503 aa19.96■□□□□ 0.79
SERF1A-209ENST00000513436 NUP153P49790 1475 aaKnown RBP19.94■□□□□ 0.78
SERF1A-209ENST00000513436 PHLDB1Q86UU1 1377 aa19.88■□□□□ 0.77
SERF1A-209ENST00000513436 FMN1Q68DA7 1419 aa19.86■□□□□ 0.77
SERF1A-209ENST00000513436 ABCA9Q8IUA7 1624 aa19.85■□□□□ 0.77
SERF1A-209ENST00000513436 CDK11AQ9UQ88 783 aaPredicted RBP19.84■□□□□ 0.77
SERF1A-209ENST00000513436 ADGRL1O94910 1474 aa19.82■□□□□ 0.76
SERF1A-209ENST00000513436 ARHGAP35Q9NRY4 1499 aa19.82■□□□□ 0.76
SERF1A-209ENST00000513436 ARAP3Q8WWN8 1544 aa19.82■□□□□ 0.76
SERF1A-209ENST00000513436 RAPGEF3O95398 923 aa19.81■□□□□ 0.76
SERF1A-209ENST00000513436 NEO1Q92859 1461 aa19.8■□□□□ 0.76
SERF1A-209ENST00000513436 CDK13Q14004 1512 aaKnown RBP19.77■□□□□ 0.76
SERF1A-209ENST00000513436 HECW1Q76N89 1606 aa19.74■□□□□ 0.75
SERF1A-209ENST00000513436 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.72■□□□□ 0.75
SERF1A-209ENST00000513436 FANCAO15360 1455 aa19.72■□□□□ 0.75
SERF1A-209ENST00000513436 AKNAQ7Z591 1439 aa19.72■□□□□ 0.75
SERF1A-209ENST00000513436 ARID4BQ4LE39 1312 aaPredicted RBP19.71■□□□□ 0.75
SERF1A-209ENST00000513436 DENND4BO75064 1496 aaPredicted RBP19.7■□□□□ 0.74
SERF1A-209ENST00000513436 EFCAB2Q5VUJ9 269 aa19.68■□□□□ 0.74
SERF1A-209ENST00000513436 CLIP1P30622 1438 aa19.67■□□□□ 0.74
SERF1A-209ENST00000513436 TTC37Q6PGP7 1564 aa19.66■□□□□ 0.74
SERF1A-209ENST00000513436 PLCH2O75038 1416 aa19.66■□□□□ 0.74
SERF1A-209ENST00000513436 CFAP74Q9C0B2 1584 aa19.65■□□□□ 0.74
SERF1A-209ENST00000513436 TROQ12816 1431 aaPredicted RBP19.64■□□□□ 0.73
SERF1A-209ENST00000513436 CASKIN1Q8WXD9 1431 aa19.63■□□□□ 0.73
SERF1A-209ENST00000513436 SCAPERQ9BY12 1400 aa19.61■□□□□ 0.73
SERF1A-209ENST00000513436 CCDC18Q5T9S5 1454 aa19.59■□□□□ 0.73
SERF1A-209ENST00000513436 MYT1LQ9UL68 1186 aa19.59■□□□□ 0.73
SERF1A-209ENST00000513436 KIF14Q15058 1648 aa19.58■□□□□ 0.73
SERF1A-209ENST00000513436 FRMPD1Q5SYB0 1578 aa19.58■□□□□ 0.73
SERF1A-209ENST00000513436 PCF11O94913 1555 aaKnown RBP19.55■□□□□ 0.72
SERF1A-209ENST00000513436 ARHGAP5Q13017 1502 aa19.54■□□□□ 0.72
SERF1A-209ENST00000513436 FYCO1Q9BQS8 1478 aa19.54■□□□□ 0.72
SERF1A-209ENST00000513436 RICTORQ6R327 1708 aa19.53■□□□□ 0.72
SERF1A-209ENST00000513436 MAGI2Q86UL8 1455 aa19.53■□□□□ 0.72
SERF1A-209ENST00000513436 MYO5CQ9NQX4 1742 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms