RNA–Protein interactions for RNA: ENST00000513396.1

KRT18P54-201, Transcript of keratin 18 pseudogene 54, humanhuman

BASIC

Gene KRT18P54, Length 748 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P54-201ENST00000513396 CUL7Q14999 1698 aa13.33□□□□□ -0.28
KRT18P54-201ENST00000513396 RANGAP1P46060 587 aaPredicted RBP13.31□□□□□ -0.28
KRT18P54-201ENST00000513396 NUP160Q12769 1436 aa13.3□□□□□ -0.28
KRT18P54-201ENST00000513396 KIF21BO75037 1637 aa13.3□□□□□ -0.28
KRT18P54-201ENST00000513396 JPH4Q96JJ6 628 aa13.28□□□□□ -0.28
KRT18P54-201ENST00000513396 TNIKQ9UKE5 1360 aa13.28□□□□□ -0.28
KRT18P54-201ENST00000513396 KIAA0586Q9BVV6 1533 aa13.26□□□□□ -0.29
KRT18P54-201ENST00000513396 CEP170Q5SW79 1584 aa13.24□□□□□ -0.29
KRT18P54-201ENST00000513396 P3H3Q8IVL6 736 aa13.21□□□□□ -0.29
KRT18P54-201ENST00000513396 CHD1O14646 1710 aa13.21□□□□□ -0.3
KRT18P54-201ENST00000513396 CLASP1Q7Z460 1538 aa13.17□□□□□ -0.3
KRT18P54-201ENST00000513396 PRG4Q92954 1404 aaPredicted RBP13.16□□□□□ -0.3
KRT18P54-201ENST00000513396 TTBK1Q5TCY1 1321 aaPredicted RBP13.15□□□□□ -0.3
KRT18P54-201ENST00000513396 IQGAP2Q13576 1575 aa13.15□□□□□ -0.3
KRT18P54-201ENST00000513396 CLIP1P30622 1438 aa13.14□□□□□ -0.31
KRT18P54-201ENST00000513396 CEP162Q5TB80 1403 aa13.14□□□□□ -0.31
KRT18P54-201ENST00000513396 UGGT2Q9NYU1 1516 aa13.13□□□□□ -0.31
KRT18P54-201ENST00000513396 DISP1Q96F81 1524 aa13.11□□□□□ -0.31
KRT18P54-201ENST00000513396 CARMIL2Q6F5E8 1435 aa13.11□□□□□ -0.31
KRT18P54-201ENST00000513396 ARHGAP35Q9NRY4 1499 aa13.1□□□□□ -0.31
KRT18P54-201ENST00000513396 FHOD3Q2V2M9 1422 aa13.09□□□□□ -0.31
KRT18P54-201ENST00000513396 ERCC6L2Q5T890 1561 aa13.07□□□□□ -0.32
KRT18P54-201ENST00000513396 PTPRGP23470 1445 aa13.07□□□□□ -0.32
KRT18P54-201ENST00000513396 CTTNBP2Q8WZ74 1663 aa13.05□□□□□ -0.32
KRT18P54-201ENST00000513396 ARAP1Q96P48 1450 aa13.05□□□□□ -0.32
KRT18P54-201ENST00000513396 CYB5RLQ6IPT4 315 aa13.05□□□□□ -0.32
KRT18P54-201ENST00000513396 SHROOM2Q13796 1616 aa13.05□□□□□ -0.32
KRT18P54-201ENST00000513396 RIMBP3CA6NJZ7 1639 aa13.04□□□□□ -0.32
KRT18P54-201ENST00000513396 RIMBP3BA6NNM3 1639 aa13.04□□□□□ -0.32
KRT18P54-201ENST00000513396 RIMBP3Q9UFD9 1639 aa13.04□□□□□ -0.32
KRT18P54-201ENST00000513396 EFCAB5A4FU69 1503 aa13.03□□□□□ -0.32
KRT18P54-201ENST00000513396 ARHGEF11O15085 1522 aa13.03□□□□□ -0.32
KRT18P54-201ENST00000513396 ATP1B4Q9UN42 357 aaPredicted RBP13.02□□□□□ -0.33
KRT18P54-201ENST00000513396 KIAA0556O60303 1618 aa13.02□□□□□ -0.33
KRT18P54-201ENST00000513396 SAMD9Q5K651 1589 aa13.01□□□□□ -0.33
KRT18P54-201ENST00000513396 ARID3CA6NKF2 412 aa12.99□□□□□ -0.33
KRT18P54-201ENST00000513396 FMN1Q68DA7 1419 aa12.98□□□□□ -0.33
KRT18P54-201ENST00000513396 PLB1Q6P1J6 1458 aa12.97□□□□□ -0.33
KRT18P54-201ENST00000513396 VPS8Q8N3P4 1428 aa12.96□□□□□ -0.34
KRT18P54-201ENST00000513396 UACAQ9BZF9 1416 aa12.96□□□□□ -0.34
KRT18P54-201ENST00000513396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.92□□□□□ -0.34
KRT18P54-201ENST00000513396 HNRNPUL2Q1KMD3 747 aaKnown RBP12.92□□□□□ -0.34
KRT18P54-201ENST00000513396 CASKIN1Q8WXD9 1431 aa12.92□□□□□ -0.34
KRT18P54-201ENST00000513396 NPM1P06748 294 aaKnown RBP eCLIP12.9□□□□□ -0.34
KRT18P54-201ENST00000513396 TRHP20396 242 aaPredicted RBP12.89□□□□□ -0.35
KRT18P54-201ENST00000513396 APLP2Q06481 763 aa12.89□□□□□ -0.35
KRT18P54-201ENST00000513396 ABCA8O94911 1581 aa12.89□□□□□ -0.35
KRT18P54-201ENST00000513396 UHRF1BP1LA0JNW5 1464 aa12.88□□□□□ -0.35
KRT18P54-201ENST00000513396 NUP153P49790 1475 aaKnown RBP12.88□□□□□ -0.35
KRT18P54-201ENST00000513396 ATP10BO94823 1461 aa12.87□□□□□ -0.35
KRT18P54-201ENST00000513396 PPARGC1BQ86YN6 1023 aaKnown RBP12.86□□□□□ -0.35
KRT18P54-201ENST00000513396 ABCC2Q92887 1545 aa12.86□□□□□ -0.35
KRT18P54-201ENST00000513396 FYCO1Q9BQS8 1478 aa12.85□□□□□ -0.35
KRT18P54-201ENST00000513396 KANK4Q5T7N3 995 aaPredicted RBP12.85□□□□□ -0.35
KRT18P54-201ENST00000513396 PLEKHD1A6NEE1 506 aa12.84□□□□□ -0.35
KRT18P54-201ENST00000513396 PCF11O94913 1555 aaKnown RBP12.84□□□□□ -0.35
KRT18P54-201ENST00000513396 EPRSP07814 1512 aaKnown RBP12.83□□□□□ -0.35
KRT18P54-201ENST00000513396 CDK11AQ9UQ88 783 aaPredicted RBP12.83□□□□□ -0.36
KRT18P54-201ENST00000513396 RAPGEF6Q8TEU7 1601 aa12.83□□□□□ -0.36
KRT18P54-201ENST00000513396 CDK13Q14004 1512 aaKnown RBP12.82□□□□□ -0.36
KRT18P54-201ENST00000513396 KDM5BQ9UGL1 1544 aa12.82□□□□□ -0.36
KRT18P54-201ENST00000513396 ADCY10Q96PN6 1610 aa12.81□□□□□ -0.36
KRT18P54-201ENST00000513396 KCNH8Q96L42 1107 aa12.81□□□□□ -0.36
KRT18P54-201ENST00000513396 CCDC18Q5T9S5 1454 aa12.78□□□□□ -0.36
KRT18P54-201ENST00000513396 HECW1Q76N89 1606 aa12.78□□□□□ -0.36
KRT18P54-201ENST00000513396 MTUS2Q5JR59 1369 aa12.77□□□□□ -0.37
KRT18P54-201ENST00000513396 ASXL2Q76L83 1435 aa12.77□□□□□ -0.37
KRT18P54-201ENST00000513396 MAP3K1Q13233 1512 aa12.75□□□□□ -0.37
KRT18P54-201ENST00000513396 TROQ12816 1431 aaPredicted RBP12.74□□□□□ -0.37
KRT18P54-201ENST00000513396 LRRC9Q6ZRR7 1453 aa12.73□□□□□ -0.37
KRT18P54-201ENST00000513396 TIAM1Q13009 1591 aa12.73□□□□□ -0.37
KRT18P54-201ENST00000513396 MAGI3Q5TCQ9 1506 aa12.72□□□□□ -0.37
KRT18P54-201ENST00000513396 FAM69CQ0P6D2 419 aa12.72□□□□□ -0.37
KRT18P54-201ENST00000513396 WDR7Q9Y4E6 1490 aa12.72□□□□□ -0.37
KRT18P54-201ENST00000513396 ZCCHC11Q5TAX3 1644 aaKnown RBP12.71□□□□□ -0.37
KRT18P54-201ENST00000513396 MAPKBP1O60336 1514 aa12.67□□□□□ -0.38
KRT18P54-201ENST00000513396 LRRIQ1Q96JM4 1722 aa12.67□□□□□ -0.38
KRT18P54-201ENST00000513396 FOXD1Q16676 465 aa12.66□□□□□ -0.38
KRT18P54-201ENST00000513396 EHBP1L1Q8N3D4 1523 aa12.65□□□□□ -0.38
KRT18P54-201ENST00000513396 PHLDB1Q86UU1 1377 aa12.65□□□□□ -0.38
KRT18P54-201ENST00000513396 CCNB3Q8WWL7 1395 aa12.65□□□□□ -0.38
KRT18P54-201ENST00000513396 NCOA2Q15596 1464 aa12.65□□□□□ -0.38
KRT18P54-201ENST00000513396 ABCC10Q5T3U5 1492 aa12.65□□□□□ -0.38
KRT18P54-201ENST00000513396 CFDP1Q9UEE9 299 aaPredicted RBP12.63□□□□□ -0.39
KRT18P54-201ENST00000513396 CFAP43Q8NDM7 1665 aa12.63□□□□□ -0.39
KRT18P54-201ENST00000513396 ZNF777Q9ULD5 760 aaPredicted RBP12.62□□□□□ -0.39
KRT18P54-201ENST00000513396 CD109Q6YHK3 1445 aa12.62□□□□□ -0.39
KRT18P54-201ENST00000513396 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.61□□□□□ -0.39
KRT18P54-201ENST00000513396 GPATCH8Q9UKJ3 1502 aaKnown RBP12.61□□□□□ -0.39
KRT18P54-201ENST00000513396 KIF14Q15058 1648 aa12.6□□□□□ -0.39
KRT18P54-201ENST00000513396 EFCAB2Q5VUJ9 269 aa12.6□□□□□ -0.39
KRT18P54-201ENST00000513396 PLCH2O75038 1416 aa12.6□□□□□ -0.39
KRT18P54-201ENST00000513396 ZNF644Q9H582 1327 aaPredicted RBP12.6□□□□□ -0.39
KRT18P54-201ENST00000513396 MYOM3Q5VTT5 1437 aa12.58□□□□□ -0.4
KRT18P54-201ENST00000513396 FAM50AQ14320 339 aaKnown RBP12.57□□□□□ -0.4
KRT18P54-201ENST00000513396 GLI2P10070 1586 aa12.56□□□□□ -0.4
KRT18P54-201ENST00000513396 HNRNPMP52272 730 aaKnown RBP eCLIP12.55□□□□□ -0.4
KRT18P54-201ENST00000513396 TTC37Q6PGP7 1564 aa12.55□□□□□ -0.4
KRT18P54-201ENST00000513396 DIP2BQ9P265 1576 aa12.55□□□□□ -0.4
KRT18P54-201ENST00000513396 FGD6Q6ZV73 1430 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms