RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 KIF13AQ9H1H9 1805 aa19.25■□□□□ 0.67
SKP2-207ENST00000513263 KIAA0586Q9BVV6 1533 aa19.2■□□□□ 0.66
SKP2-207ENST00000513263 JPH4Q96JJ6 628 aa19.19■□□□□ 0.66
SKP2-207ENST00000513263 MAPKBP1O60336 1514 aa19.17■□□□□ 0.66
SKP2-207ENST00000513263 IGF1RP08069 1367 aa19.13■□□□□ 0.65
SKP2-207ENST00000513263 ADCY10Q96PN6 1610 aa19.12■□□□□ 0.65
SKP2-207ENST00000513263 NPM1P06748 294 aaKnown RBP eCLIP19.1■□□□□ 0.65
SKP2-207ENST00000513263 IQGAP2Q13576 1575 aa19.08■□□□□ 0.65
SKP2-207ENST00000513263 DIP2BQ9P265 1576 aa19.08■□□□□ 0.65
SKP2-207ENST00000513263 ABCC10Q5T3U5 1492 aa19.07■□□□□ 0.64
SKP2-207ENST00000513263 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
SKP2-207ENST00000513263 CARMIL2Q6F5E8 1435 aa19.05■□□□□ 0.64
SKP2-207ENST00000513263 AEBP2Q6ZN18 517 aaPredicted RBP19.01■□□□□ 0.63
SKP2-207ENST00000513263 TNIKQ9UKE5 1360 aa18.96■□□□□ 0.63
SKP2-207ENST00000513263 CTTNBP2Q8WZ74 1663 aa18.96■□□□□ 0.63
SKP2-207ENST00000513263 PTPRGP23470 1445 aa18.96■□□□□ 0.63
SKP2-207ENST00000513263 RAPGEF2Q9Y4G8 1499 aa18.95■□□□□ 0.62
SKP2-207ENST00000513263 ABCC2Q92887 1545 aa18.95■□□□□ 0.62
SKP2-207ENST00000513263 TSPOAP1O95153 1857 aa18.94■□□□□ 0.62
SKP2-207ENST00000513263 KDM6BO15054 1643 aa18.94■□□□□ 0.62
SKP2-207ENST00000513263 FAM69CQ0P6D2 419 aa18.94■□□□□ 0.62
SKP2-207ENST00000513263 UHRF1BP1LA0JNW5 1464 aa18.93■□□□□ 0.62
SKP2-207ENST00000513263 UGGT2Q9NYU1 1516 aa18.93■□□□□ 0.62
SKP2-207ENST00000513263 PLB1Q6P1J6 1458 aa18.9■□□□□ 0.62
SKP2-207ENST00000513263 KIAA0556O60303 1618 aa18.89■□□□□ 0.62
SKP2-207ENST00000513263 GLI2P10070 1586 aa18.89■□□□□ 0.61
SKP2-207ENST00000513263 DISP1Q96F81 1524 aa18.87■□□□□ 0.61
SKP2-207ENST00000513263 UACAQ9BZF9 1416 aa18.85■□□□□ 0.61
SKP2-207ENST00000513263 GOLGA3Q08378 1498 aa18.83■□□□□ 0.6
SKP2-207ENST00000513263 KDM5BQ9UGL1 1544 aa18.82■□□□□ 0.6
SKP2-207ENST00000513263 ASXL2Q76L83 1435 aa18.82■□□□□ 0.6
SKP2-207ENST00000513263 ZCCHC11Q5TAX3 1644 aaKnown RBP18.82■□□□□ 0.6
SKP2-207ENST00000513263 PPRC1Q5VV67 1664 aaKnown RBP18.79■□□□□ 0.6
SKP2-207ENST00000513263 MAP3K4Q9Y6R4 1608 aa18.78■□□□□ 0.6
SKP2-207ENST00000513263 TEX14Q8IWB6 1497 aa18.77■□□□□ 0.59
SKP2-207ENST00000513263 TTBK1Q5TCY1 1321 aaPredicted RBP18.74■□□□□ 0.59
SKP2-207ENST00000513263 EPRSP07814 1512 aaKnown RBP18.73■□□□□ 0.59
SKP2-207ENST00000513263 PRXQ9BXM0 1461 aa18.71■□□□□ 0.59
SKP2-207ENST00000513263 CFAP43Q8NDM7 1665 aa18.71■□□□□ 0.59
SKP2-207ENST00000513263 WDR7Q9Y4E6 1490 aa18.7■□□□□ 0.58
SKP2-207ENST00000513263 ABCA8O94911 1581 aa18.68■□□□□ 0.58
SKP2-207ENST00000513263 FAM9AQ8IZU1 332 aaPredicted RBP18.67■□□□□ 0.58
SKP2-207ENST00000513263 EEA1Q15075 1411 aa18.61■□□□□ 0.57
SKP2-207ENST00000513263 SAMD9Q5K651 1589 aa18.59■□□□□ 0.57
SKP2-207ENST00000513263 MAGI3Q5TCQ9 1506 aa18.59■□□□□ 0.57
SKP2-207ENST00000513263 RAPGEF6Q8TEU7 1601 aa18.53■□□□□ 0.56
SKP2-207ENST00000513263 CD109Q6YHK3 1445 aa18.52■□□□□ 0.56
SKP2-207ENST00000513263 ADGRL1O94910 1474 aa18.52■□□□□ 0.55
SKP2-207ENST00000513263 ABCA9Q8IUA7 1624 aa18.5■□□□□ 0.55
SKP2-207ENST00000513263 KDM4FA0A1W2PPD8 638 aa18.5■□□□□ 0.55
SKP2-207ENST00000513263 COL17A1Q9UMD9 1497 aaPredicted RBP18.49■□□□□ 0.55
SKP2-207ENST00000513263 CSRNP3Q8WYN3 585 aa18.47■□□□□ 0.55
SKP2-207ENST00000513263 KIF21BO75037 1637 aa18.47■□□□□ 0.55
SKP2-207ENST00000513263 EFCAB5A4FU69 1503 aa18.47■□□□□ 0.55
SKP2-207ENST00000513263 PHLDB1Q86UU1 1377 aa18.45■□□□□ 0.54
SKP2-207ENST00000513263 ARAP3Q8WWN8 1544 aa18.44■□□□□ 0.54
SKP2-207ENST00000513263 ATP10BO94823 1461 aa18.43■□□□□ 0.54
SKP2-207ENST00000513263 CFAP74Q9C0B2 1584 aa18.41■□□□□ 0.54
SKP2-207ENST00000513263 KCNH8Q96L42 1107 aa18.4■□□□□ 0.54
SKP2-207ENST00000513263 NEO1Q92859 1461 aa18.39■□□□□ 0.54
SKP2-207ENST00000513263 NUP153P49790 1475 aaKnown RBP18.36■□□□□ 0.53
SKP2-207ENST00000513263 P3H3Q8IVL6 736 aa18.33■□□□□ 0.52
SKP2-207ENST00000513263 FHOD3Q2V2M9 1422 aa18.32■□□□□ 0.52
SKP2-207ENST00000513263 HECW2Q9P2P5 1572 aa18.3■□□□□ 0.52
SKP2-207ENST00000513263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.29■□□□□ 0.52
SKP2-207ENST00000513263 HNRNPUL2Q1KMD3 747 aaKnown RBP18.29■□□□□ 0.52
SKP2-207ENST00000513263 HECW1Q76N89 1606 aa18.27■□□□□ 0.52
SKP2-207ENST00000513263 RICTORQ6R327 1708 aa18.27■□□□□ 0.52
SKP2-207ENST00000513263 ARID3CA6NKF2 412 aa18.27■□□□□ 0.52
SKP2-207ENST00000513263 ARHGEF40Q8TER5 1519 aa18.27■□□□□ 0.51
SKP2-207ENST00000513263 FRMPD1Q5SYB0 1578 aa18.25■□□□□ 0.51
SKP2-207ENST00000513263 FMN1Q68DA7 1419 aa18.24■□□□□ 0.51
SKP2-207ENST00000513263 ADAMTSL3P82987 1691 aa18.24■□□□□ 0.51
SKP2-207ENST00000513263 BCORL1Q5H9F3 1711 aa18.23■□□□□ 0.51
SKP2-207ENST00000513263 PLEKHD1A6NEE1 506 aa18.23■□□□□ 0.51
SKP2-207ENST00000513263 TTC37Q6PGP7 1564 aa18.22■□□□□ 0.51
SKP2-207ENST00000513263 MYO5CQ9NQX4 1742 aa18.22■□□□□ 0.51
SKP2-207ENST00000513263 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.22■□□□□ 0.51
SKP2-207ENST00000513263 FANCAO15360 1455 aa18.21■□□□□ 0.51
SKP2-207ENST00000513263 ZMYM4Q5VZL5 1548 aa18.21■□□□□ 0.51
SKP2-207ENST00000513263 DENND4BO75064 1496 aaPredicted RBP18.2■□□□□ 0.5
SKP2-207ENST00000513263 RANGAP1P46060 587 aaPredicted RBP18.17■□□□□ 0.5
SKP2-207ENST00000513263 KIF14Q15058 1648 aa18.16■□□□□ 0.5
SKP2-207ENST00000513263 AKNAQ7Z591 1439 aa18.16■□□□□ 0.5
SKP2-207ENST00000513263 MAGI2Q86UL8 1455 aa18.15■□□□□ 0.5
SKP2-207ENST00000513263 CDK13Q14004 1512 aaKnown RBP18.15■□□□□ 0.5
SKP2-207ENST00000513263 MADDQ8WXG6 1647 aa18.15■□□□□ 0.5
SKP2-207ENST00000513263 POGZQ7Z3K3 1410 aa18.14■□□□□ 0.49
SKP2-207ENST00000513263 PTPRMP28827 1452 aa18.14■□□□□ 0.49
SKP2-207ENST00000513263 ZFYVE16Q7Z3T8 1539 aa18.13■□□□□ 0.49
SKP2-207ENST00000513263 RAPGEF3O95398 923 aa18.13■□□□□ 0.49
SKP2-207ENST00000513263 CDK11AQ9UQ88 783 aaPredicted RBP18.13■□□□□ 0.49
SKP2-207ENST00000513263 UBTFP17480 764 aaKnown RBP18.12■□□□□ 0.49
SKP2-207ENST00000513263 ARHGAP35Q9NRY4 1499 aa18.12■□□□□ 0.49
SKP2-207ENST00000513263 RIMS1Q86UR5 1692 aaKnown RBP18.1■□□□□ 0.49
SKP2-207ENST00000513263 CLIP1P30622 1438 aa18.1■□□□□ 0.49
SKP2-207ENST00000513263 PLCH2O75038 1416 aa18.09■□□□□ 0.49
SKP2-207ENST00000513263 FER1L4A9Z1Z3 1794 aa18.09■□□□□ 0.49
SKP2-207ENST00000513263 PCF11O94913 1555 aaKnown RBP18.07■□□□□ 0.48
SKP2-207ENST00000513263 CCDC18Q5T9S5 1454 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms