RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 JPH4Q96JJ6 628 aa30.1■■■□□ 2.41
DDR1-272ENST00000513243 KIAA0586Q9BVV6 1533 aa30.04■■■□□ 2.4
DDR1-272ENST00000513243 PRG4Q92954 1404 aaPredicted RBP30.04■■■□□ 2.4
DDR1-272ENST00000513243 RAPGEF2Q9Y4G8 1499 aa29.98■■■□□ 2.39
DDR1-272ENST00000513243 CHIC1Q5VXU3 224 aa29.86■■■□□ 2.37
DDR1-272ENST00000513243 PRXQ9BXM0 1461 aa29.86■■■□□ 2.37
DDR1-272ENST00000513243 IQGAP2Q13576 1575 aa29.82■■■□□ 2.36
DDR1-272ENST00000513243 CSRNP3Q8WYN3 585 aa29.81■■■□□ 2.36
DDR1-272ENST00000513243 EEA1Q15075 1411 aa29.75■■■□□ 2.35
DDR1-272ENST00000513243 TRHP20396 242 aaPredicted RBP29.74■■■□□ 2.35
DDR1-272ENST00000513243 CARMIL2Q6F5E8 1435 aa29.71■■■□□ 2.35
DDR1-272ENST00000513243 FAM9AQ8IZU1 332 aaPredicted RBP29.69■■■□□ 2.34
DDR1-272ENST00000513243 UGGT2Q9NYU1 1516 aa29.67■■■□□ 2.34
DDR1-272ENST00000513243 DISP1Q96F81 1524 aa29.66■■■□□ 2.34
DDR1-272ENST00000513243 PTPRGP23470 1445 aa29.65■■■□□ 2.34
DDR1-272ENST00000513243 TNIKQ9UKE5 1360 aa29.64■■■□□ 2.34
DDR1-272ENST00000513243 CTTNBP2Q8WZ74 1663 aa29.64■■■□□ 2.34
DDR1-272ENST00000513243 TTBK1Q5TCY1 1321 aaPredicted RBP29.62■■■□□ 2.33
DDR1-272ENST00000513243 ADCY10Q96PN6 1610 aa29.57■■■□□ 2.32
DDR1-272ENST00000513243 KIAA0556O60303 1618 aa29.54■■■□□ 2.32
DDR1-272ENST00000513243 NPM1P06748 294 aaKnown RBP eCLIP29.52■■■□□ 2.32
DDR1-272ENST00000513243 GOLGA3Q08378 1498 aa29.48■■■□□ 2.31
DDR1-272ENST00000513243 KIF21BO75037 1637 aa29.45■■■□□ 2.3
DDR1-272ENST00000513243 UACAQ9BZF9 1416 aa29.44■■■□□ 2.3
DDR1-272ENST00000513243 UHRF1BP1LA0JNW5 1464 aa29.42■■■□□ 2.3
DDR1-272ENST00000513243 MAPKBP1O60336 1514 aa29.4■■■□□ 2.3
DDR1-272ENST00000513243 ABCC2Q92887 1545 aa29.39■■■□□ 2.3
DDR1-272ENST00000513243 P3H3Q8IVL6 736 aa29.35■■■□□ 2.29
DDR1-272ENST00000513243 EHMT2Q96KQ7 1210 aa29.33■■■□□ 2.29
DDR1-272ENST00000513243 ABCC10Q5T3U5 1492 aa29.31■■■□□ 2.28
DDR1-272ENST00000513243 PLB1Q6P1J6 1458 aa29.31■■■□□ 2.28
DDR1-272ENST00000513243 RANGAP1P46060 587 aaPredicted RBP29.3■■■□□ 2.28
DDR1-272ENST00000513243 KIF13AQ9H1H9 1805 aa29.29■■■□□ 2.28
DDR1-272ENST00000513243 FAM69CQ0P6D2 419 aa29.29■■■□□ 2.28
DDR1-272ENST00000513243 SAMD9Q5K651 1589 aa29.29■■■□□ 2.28
DDR1-272ENST00000513243 KDM5BQ9UGL1 1544 aa29.28■■■□□ 2.28
DDR1-272ENST00000513243 UBTFP17480 764 aaKnown RBP29.26■■■□□ 2.27
DDR1-272ENST00000513243 ABCA8O94911 1581 aa29.25■■■□□ 2.27
DDR1-272ENST00000513243 ASXL2Q76L83 1435 aa29.24■■■□□ 2.27
DDR1-272ENST00000513243 DIP2BQ9P265 1576 aa29.24■■■□□ 2.27
DDR1-272ENST00000513243 ZCCHC11Q5TAX3 1644 aaKnown RBP29.19■■■□□ 2.26
DDR1-272ENST00000513243 FHOD3Q2V2M9 1422 aa29.15■■■□□ 2.26
DDR1-272ENST00000513243 EFCAB5A4FU69 1503 aa29.12■■■□□ 2.25
DDR1-272ENST00000513243 ARID3CA6NKF2 412 aa29.06■■■□□ 2.24
DDR1-272ENST00000513243 GLI2P10070 1586 aa29.05■■■□□ 2.24
DDR1-272ENST00000513243 EPRSP07814 1512 aaKnown RBP29.05■■■□□ 2.24
DDR1-272ENST00000513243 ATP10BO94823 1461 aa29.04■■■□□ 2.24
DDR1-272ENST00000513243 WDR7Q9Y4E6 1490 aa29.04■■■□□ 2.24
DDR1-272ENST00000513243 RAPGEF6Q8TEU7 1601 aa29.04■■■□□ 2.24
DDR1-272ENST00000513243 ARHGAP35Q9NRY4 1499 aa29■■■□□ 2.23
DDR1-272ENST00000513243 TSPOAP1O95153 1857 aa28.99■■■□□ 2.23
DDR1-272ENST00000513243 NUP153P49790 1475 aaKnown RBP28.97■■■□□ 2.23
DDR1-272ENST00000513243 KCNH8Q96L42 1107 aa28.96■■■□□ 2.23
DDR1-272ENST00000513243 MAP3K4Q9Y6R4 1608 aa28.91■■■□□ 2.22
DDR1-272ENST00000513243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.9■■■□□ 2.22
DDR1-272ENST00000513243 HNRNPUL2Q1KMD3 747 aaKnown RBP28.9■■■□□ 2.22
DDR1-272ENST00000513243 PPRC1Q5VV67 1664 aaKnown RBP28.89■■■□□ 2.21
DDR1-272ENST00000513243 FMN1Q68DA7 1419 aa28.87■■■□□ 2.21
DDR1-272ENST00000513243 CD109Q6YHK3 1445 aa28.81■■■□□ 2.2
DDR1-272ENST00000513243 KDM6BO15054 1643 aa28.8■■■□□ 2.2
DDR1-272ENST00000513243 TEX14Q8IWB6 1497 aa28.78■■■□□ 2.2
DDR1-272ENST00000513243 ATP1B4Q9UN42 357 aaPredicted RBP28.78■■■□□ 2.2
DDR1-272ENST00000513243 CFAP43Q8NDM7 1665 aa28.77■■■□□ 2.2
DDR1-272ENST00000513243 PLEKHD1A6NEE1 506 aa28.77■■■□□ 2.2
DDR1-272ENST00000513243 CLIP1P30622 1438 aa28.77■■■□□ 2.2
DDR1-272ENST00000513243 CDK13Q14004 1512 aaKnown RBP28.75■■■□□ 2.19
DDR1-272ENST00000513243 MAGI3Q5TCQ9 1506 aa28.74■■■□□ 2.19
DDR1-272ENST00000513243 HECW1Q76N89 1606 aa28.72■■■□□ 2.19
DDR1-272ENST00000513243 ABCA9Q8IUA7 1624 aa28.71■■■□□ 2.19
DDR1-272ENST00000513243 COL17A1Q9UMD9 1497 aaPredicted RBP28.71■■■□□ 2.19
DDR1-272ENST00000513243 LOC105371045A0A1W2PR82 267 aa28.67■■■□□ 2.18
DDR1-272ENST00000513243 CASKIN1Q8WXD9 1431 aa28.65■■■□□ 2.18
DDR1-272ENST00000513243 PCF11O94913 1555 aaKnown RBP28.62■■■□□ 2.17
DDR1-272ENST00000513243 CEP162Q5TB80 1403 aa28.6■■■□□ 2.17
DDR1-272ENST00000513243 CDK11AQ9UQ88 783 aaPredicted RBP28.59■■■□□ 2.17
DDR1-272ENST00000513243 LRRIQ1Q96JM4 1722 aa28.59■■■□□ 2.17
DDR1-272ENST00000513243 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.58■■■□□ 2.176e-7■■■■□ 21.9
DDR1-272ENST00000513243 FYCO1Q9BQS8 1478 aa28.55■■■□□ 2.16
DDR1-272ENST00000513243 PHLDB1Q86UU1 1377 aa28.52■■■□□ 2.16
DDR1-272ENST00000513243 TTC37Q6PGP7 1564 aa28.52■■■□□ 2.16
DDR1-272ENST00000513243 CCDC18Q5T9S5 1454 aa28.52■■■□□ 2.16
DDR1-272ENST00000513243 TROQ12816 1431 aaPredicted RBP28.52■■■□□ 2.16
DDR1-272ENST00000513243 ARAP3Q8WWN8 1544 aa28.51■■■□□ 2.15
DDR1-272ENST00000513243 NEO1Q92859 1461 aa28.5■■■□□ 2.15
DDR1-272ENST00000513243 KIF14Q15058 1648 aa28.44■■■□□ 2.14
DDR1-272ENST00000513243 FANCAO15360 1455 aa28.42■■■□□ 2.14
DDR1-272ENST00000513243 PLCH2O75038 1416 aa28.42■■■□□ 2.14
DDR1-272ENST00000513243 RAPGEF3O95398 923 aa28.4■■■□□ 2.14
DDR1-272ENST00000513243 AKNAQ7Z591 1439 aa28.4■■■□□ 2.14
DDR1-272ENST00000513243 CFAP74Q9C0B2 1584 aa28.35■■■□□ 2.13
DDR1-272ENST00000513243 AEBP2Q6ZN18 517 aaPredicted RBP28.33■■■□□ 2.13
DDR1-272ENST00000513243 MYO5CQ9NQX4 1742 aa28.32■■■□□ 2.12
DDR1-272ENST00000513243 EFCAB2Q5VUJ9 269 aa28.32■■■□□ 2.12
DDR1-272ENST00000513243 DENND4BO75064 1496 aaPredicted RBP28.31■■■□□ 2.12
DDR1-272ENST00000513243 FRMPD1Q5SYB0 1578 aa28.3■■■□□ 2.12
DDR1-272ENST00000513243 KDM4FA0A1W2PPD8 638 aa28.3■■■□□ 2.12
DDR1-272ENST00000513243 ADGRL1O94910 1474 aa28.27■■■□□ 2.12
DDR1-272ENST00000513243 VPS8Q8N3P4 1428 aa28.26■■■□□ 2.12
DDR1-272ENST00000513243 ARHGAP5Q13017 1502 aa28.26■■■□□ 2.11
DDR1-272ENST00000513243 SCAPERQ9BY12 1400 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms