RNA–Protein interactions for RNA: ENST00000512718.7

CSNK1G3-207, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2 BASIC

Gene CSNK1G3, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-207ENST00000512718 FBLN2P98095 1184 aa37.21■■■■□ 3.55
CSNK1G3-207ENST00000512718 CEP170Q5SW79 1584 aa37.13■■■■□ 3.53
CSNK1G3-207ENST00000512718 CLIP1P30622 1438 aa37.11■■■■□ 3.53
CSNK1G3-207ENST00000512718 NUP160Q12769 1436 aa37.09■■■■□ 3.53
CSNK1G3-207ENST00000512718 IQGAP2Q13576 1575 aa37.09■■■■□ 3.53
CSNK1G3-207ENST00000512718 KIAA0586Q9BVV6 1533 aa37.05■■■■□ 3.52
CSNK1G3-207ENST00000512718 RANGAP1P46060 587 aaPredicted RBP37.04■■■■□ 3.52
CSNK1G3-207ENST00000512718 ARHGAP35Q9NRY4 1499 aa36.94■■■■□ 3.5
CSNK1G3-207ENST00000512718 EFCAB5A4FU69 1503 aa36.93■■■■□ 3.5
CSNK1G3-207ENST00000512718 SAMD9Q5K651 1589 aa36.89■■■■□ 3.5
CSNK1G3-207ENST00000512718 UGGT2Q9NYU1 1516 aa36.89■■■■□ 3.5
CSNK1G3-207ENST00000512718 ARAP1Q96P48 1450 aa36.84■■■■□ 3.49
CSNK1G3-207ENST00000512718 CLASP1Q7Z460 1538 aa36.79■■■■□ 3.48
CSNK1G3-207ENST00000512718 SHROOM2Q13796 1616 aa36.73■■■■□ 3.47
CSNK1G3-207ENST00000512718 VPS8Q8N3P4 1428 aa36.72■■■■□ 3.47
CSNK1G3-207ENST00000512718 KIAA0556O60303 1618 aa36.71■■■■□ 3.47
CSNK1G3-207ENST00000512718 JPH4Q96JJ6 628 aa36.71■■■■□ 3.47
CSNK1G3-207ENST00000512718 DISP1Q96F81 1524 aa36.7■■■■□ 3.47
CSNK1G3-207ENST00000512718 FHOD3Q2V2M9 1422 aa36.7■■■■□ 3.47
CSNK1G3-207ENST00000512718 P3H3Q8IVL6 736 aa36.7■■■■□ 3.46
CSNK1G3-207ENST00000512718 CARMIL2Q6F5E8 1435 aa36.61■■■■□ 3.45
CSNK1G3-207ENST00000512718 OSCARQ8IYS5 282 aa36.61■■■■□ 3.45
CSNK1G3-207ENST00000512718 PRG4Q92954 1404 aaPredicted RBP36.56■■■■□ 3.44
CSNK1G3-207ENST00000512718 FMN1Q68DA7 1419 aa36.55■■■■□ 3.44
CSNK1G3-207ENST00000512718 PCF11O94913 1555 aaKnown RBP36.48■■■■□ 3.43
CSNK1G3-207ENST00000512718 ERCC6L2Q5T890 1561 aa36.43■■■■□ 3.42
CSNK1G3-207ENST00000512718 FYCO1Q9BQS8 1478 aa36.4■■■■□ 3.42
CSNK1G3-207ENST00000512718 CASKIN1Q8WXD9 1431 aa36.4■■■■□ 3.42
CSNK1G3-207ENST00000512718 TTBK1Q5TCY1 1321 aaPredicted RBP36.31■■■■□ 3.4
CSNK1G3-207ENST00000512718 RAPGEF6Q8TEU7 1601 aa36.3■■■■□ 3.4
CSNK1G3-207ENST00000512718 HECW1Q76N89 1606 aa36.29■■■■□ 3.4
CSNK1G3-207ENST00000512718 APLP2Q06481 763 aa36.28■■■■□ 3.4
CSNK1G3-207ENST00000512718 LRRIQ1Q96JM4 1722 aa36.27■■■■□ 3.4
CSNK1G3-207ENST00000512718 PTPRGP23470 1445 aa36.27■■■■□ 3.4
CSNK1G3-207ENST00000512718 CFAP43Q8NDM7 1665 aa36.24■■■■□ 3.39
CSNK1G3-207ENST00000512718 ATP1B4Q9UN42 357 aaPredicted RBP36.23■■■■□ 3.39
CSNK1G3-207ENST00000512718 MAP3K1Q13233 1512 aa36.22■■■■□ 3.39
CSNK1G3-207ENST00000512718 ABCA8O94911 1581 aa36.21■■■■□ 3.39
CSNK1G3-207ENST00000512718 TIAM1Q13009 1591 aa36.21■■■■□ 3.39
CSNK1G3-207ENST00000512718 PLB1Q6P1J6 1458 aa36.21■■■■□ 3.39
CSNK1G3-207ENST00000512718 CCDC18Q5T9S5 1454 aa36.14■■■■□ 3.38
CSNK1G3-207ENST00000512718 NUP153P49790 1475 aaKnown RBP36.13■■■■□ 3.37
CSNK1G3-207ENST00000512718 PPARGC1BQ86YN6 1023 aaKnown RBP36.11■■■■□ 3.37
CSNK1G3-207ENST00000512718 EPRSP07814 1512 aaKnown RBP36.11■■■■□ 3.37
CSNK1G3-207ENST00000512718 ARHGEF11O15085 1522 aa36.08■■■■□ 3.37
CSNK1G3-207ENST00000512718 UACAQ9BZF9 1416 aa36.08■■■■□ 3.37
CSNK1G3-207ENST00000512718 CDK13Q14004 1512 aaKnown RBP36.04■■■■□ 3.36
CSNK1G3-207ENST00000512718 ABCC2Q92887 1545 aa36.03■■■■□ 3.36
CSNK1G3-207ENST00000512718 LRRC9Q6ZRR7 1453 aa36.01■■■■□ 3.36
CSNK1G3-207ENST00000512718 KANK4Q5T7N3 995 aaPredicted RBP36.01■■■■□ 3.35
CSNK1G3-207ENST00000512718 RIMBP3CA6NJZ7 1639 aa35.98■■■■□ 3.35
CSNK1G3-207ENST00000512718 RIMBP3BA6NNM3 1639 aa35.98■■■■□ 3.35
CSNK1G3-207ENST00000512718 RIMBP3Q9UFD9 1639 aa35.98■■■■□ 3.35
CSNK1G3-207ENST00000512718 UHRF1BP1LA0JNW5 1464 aa35.97■■■■□ 3.35
CSNK1G3-207ENST00000512718 ARID3CA6NKF2 412 aa35.95■■■■□ 3.35
CSNK1G3-207ENST00000512718 ATP10BO94823 1461 aa35.9■■■■□ 3.34
CSNK1G3-207ENST00000512718 ADCY10Q96PN6 1610 aa35.9■■■■□ 3.34
CSNK1G3-207ENST00000512718 EHBP1L1Q8N3D4 1523 aa35.89■■■■□ 3.34
CSNK1G3-207ENST00000512718 MAGI3Q5TCQ9 1506 aa35.88■■■■□ 3.34
CSNK1G3-207ENST00000512718 MTUS2Q5JR59 1369 aa35.87■■■■□ 3.33
CSNK1G3-207ENST00000512718 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.85■■■■□ 3.33
CSNK1G3-207ENST00000512718 HNRNPUL2Q1KMD3 747 aaKnown RBP35.85■■■■□ 3.33
CSNK1G3-207ENST00000512718 ZCCHC11Q5TAX3 1644 aaKnown RBP35.82■■■■□ 3.33
CSNK1G3-207ENST00000512718 CDK11AQ9UQ88 783 aaPredicted RBP35.81■■■■□ 3.32
CSNK1G3-207ENST00000512718 KDM5BQ9UGL1 1544 aa35.8■■■■□ 3.32
CSNK1G3-207ENST00000512718 SUPT6HQ7KZ85 1726 aaKnown RBP35.8■■■■□ 3.32
CSNK1G3-207ENST00000512718 TROQ12816 1431 aaPredicted RBP35.72■■■■□ 3.31
CSNK1G3-207ENST00000512718 TRIM26Q12899 539 aaPredicted RBP35.71■■■■□ 3.31
CSNK1G3-207ENST00000512718 NCOA2Q15596 1464 aa35.67■■■■□ 3.3
CSNK1G3-207ENST00000512718 PLEKHD1A6NEE1 506 aa35.67■■■■□ 3.3
CSNK1G3-207ENST00000512718 CYB5RLQ6IPT4 315 aa35.64■■■■□ 3.3
CSNK1G3-207ENST00000512718 KIF14Q15058 1648 aa35.61■■■■□ 3.29
CSNK1G3-207ENST00000512718 PHLDB1Q86UU1 1377 aa35.61■■■■□ 3.29
CSNK1G3-207ENST00000512718 NPM1P06748 294 aaKnown RBP eCLIP35.55■■■■□ 3.28
CSNK1G3-207ENST00000512718 RRBP1Q9P2E9 1410 aaKnown RBP35.52■■■■□ 3.28
CSNK1G3-207ENST00000512718 MYOM3Q5VTT5 1437 aa35.5■■■■□ 3.27
CSNK1G3-207ENST00000512718 WDR7Q9Y4E6 1490 aa35.48■■■■□ 3.27
CSNK1G3-207ENST00000512718 PCGF6Q9BYE7 350 aa35.48■■■■□ 3.27
CSNK1G3-207ENST00000512718 ABCC10Q5T3U5 1492 aa35.46■■■■□ 3.27
CSNK1G3-207ENST00000512718 ITSN2Q9NZM3 1697 aa35.46■■■■□ 3.27
CSNK1G3-207ENST00000512718 ASXL2Q76L83 1435 aa35.46■■■■□ 3.27
CSNK1G3-207ENST00000512718 CCNB3Q8WWL7 1395 aa35.43■■■■□ 3.26
CSNK1G3-207ENST00000512718 FGD6Q6ZV73 1430 aa35.43■■■■□ 3.26
CSNK1G3-207ENST00000512718 CDC42BPAQ5VT25 1732 aa35.42■■■■□ 3.26
CSNK1G3-207ENST00000512718 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.4■■■■□ 3.26
CSNK1G3-207ENST00000512718 TTC37Q6PGP7 1564 aa35.39■■■■□ 3.26
CSNK1G3-207ENST00000512718 MAPKBP1O60336 1514 aa35.38■■■■□ 3.25
CSNK1G3-207ENST00000512718 KCNH8Q96L42 1107 aa35.37■■■■□ 3.25
CSNK1G3-207ENST00000512718 MIA2Q96PC5 1412 aa35.35■■■■□ 3.25
CSNK1G3-207ENST00000512718 PTPN23Q9H3S7 1636 aa35.35■■■■□ 3.25
CSNK1G3-207ENST00000512718 GPATCH8Q9UKJ3 1502 aaKnown RBP35.35■■■■□ 3.25
CSNK1G3-207ENST00000512718 MYO5CQ9NQX4 1742 aa35.33■■■■□ 3.25
CSNK1G3-207ENST00000512718 PREX2Q70Z35 1606 aa35.32■■■■□ 3.24
CSNK1G3-207ENST00000512718 DNAJC5Q9H3Z4 198 aa35.3■■■■□ 3.24
CSNK1G3-207ENST00000512718 CDC42BPBQ9Y5S2 1711 aa35.28■■■■□ 3.24
CSNK1G3-207ENST00000512718 ABCA9Q8IUA7 1624 aa35.28■■■■□ 3.24
CSNK1G3-207ENST00000512718 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.28■■■■□ 3.244e-6■■■■□ 20.1
CSNK1G3-207ENST00000512718 TCOF1Q13428 1488 aaKnown RBP35.27■■■■□ 3.24
CSNK1G3-207ENST00000512718 FAM50AQ14320 339 aaKnown RBP35.25■■■■□ 3.23
CSNK1G3-207ENST00000512718 CFDP1Q9UEE9 299 aaPredicted RBP35.22■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms