RNA–Protein interactions for RNA: ENST00000512248.5

GIN1-205, Transcript of gypsy retrotransposon integrase 1, humanhuman

TSL 1 (best)

Gene GIN1, Length 3,325 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-205ENST00000512248 BICRAQ9NZM4 1560 aa11.58□□□□□ -0.56
GIN1-205ENST00000512248 NEFLP07196 543 aa11.56□□□□□ -0.56
GIN1-205ENST00000512248 CNGB1Q14028 1251 aaPredicted RBP11.54□□□□□ -0.56
GIN1-205ENST00000512248 RBM19Q9Y4C8 960 aaKnown RBP11.52□□□□□ -0.56
GIN1-205ENST00000512248 PRXQ9BXM0 1461 aa11.52□□□□□ -0.57
GIN1-205ENST00000512248 RRBP1Q9P2E9 1410 aaKnown RBP11.51□□□□□ -0.57
GIN1-205ENST00000512248 ANP32CO43423 234 aa11.51□□□□□ -0.57
GIN1-205ENST00000512248 PLPPR3Q6T4P5 718 aa11.51□□□□□ -0.57
GIN1-205ENST00000512248 ARHGAP35Q9NRY4 1499 aa11.5□□□□□ -0.57
GIN1-205ENST00000512248 KIF27Q86VH2 1401 aa11.5□□□□□ -0.57
GIN1-205ENST00000512248 WDR97A6NE52 1622 aa11.49□□□□□ -0.57
GIN1-205ENST00000512248 PHLDB1Q86UU1 1377 aa11.48□□□□□ -0.57
GIN1-205ENST00000512248 TOP2BQ02880 1626 aa11.48□□□□□ -0.57
GIN1-205ENST00000512248 SENP3-EIF4A1A0A087X0R7 540 aa11.48□□□□□ -0.57
GIN1-205ENST00000512248 PPP1R15AO75807 674 aaPredicted RBP11.48□□□□□ -0.57
GIN1-205ENST00000512248 SETD5Q9C0A6 1442 aa11.47□□□□□ -0.57
GIN1-205ENST00000512248 HNRNPUQ00839 825 aaKnown RBP eCLIP11.46□□□□□ -0.57
GIN1-205ENST00000512248 MAPKBP1O60336 1514 aa11.46□□□□□ -0.57
GIN1-205ENST00000512248 CUX1P39880 1505 aa11.45□□□□□ -0.58
GIN1-205ENST00000512248 PEG3Q9GZU2 1588 aa11.44□□□□□ -0.58
GIN1-205ENST00000512248 CUX2O14529 1486 aa11.44□□□□□ -0.58
GIN1-205ENST00000512248 ARID3CA6NKF2 412 aa11.43□□□□□ -0.58
GIN1-205ENST00000512248 ANO8Q9HCE9 1232 aaPredicted RBP11.42□□□□□ -0.58
GIN1-205ENST00000512248 CHIC2Q9UKJ5 165 aa11.42□□□□□ -0.58
GIN1-205ENST00000512248 IGF1RP08069 1367 aa11.41□□□□□ -0.58
GIN1-205ENST00000512248 ERICH3Q5RHP9 1530 aa11.41□□□□□ -0.58
GIN1-205ENST00000512248 MSH5O43196 834 aa11.4□□□□□ -0.58
GIN1-205ENST00000512248 CARMIL1Q5VZK9 1371 aa11.4□□□□□ -0.58
GIN1-205ENST00000512248 TONSLQ96HA7 1378 aa11.4□□□□□ -0.58
GIN1-205ENST00000512248 RRP7BPQ9NSQ0 103 aa11.38□□□□□ -0.59
GIN1-205ENST00000512248 FHOD3Q2V2M9 1422 aa11.37□□□□□ -0.59
GIN1-205ENST00000512248 FAM9BQ8IZU0 186 aa11.37□□□□□ -0.59
GIN1-205ENST00000512248 CCDC184Q52MB2 194 aa11.37□□□□□ -0.59
GIN1-205ENST00000512248 FOXD1Q16676 465 aa11.36□□□□□ -0.59
GIN1-205ENST00000512248 LRRC9Q6ZRR7 1453 aa11.36□□□□□ -0.59
GIN1-205ENST00000512248 POLR3GLQ9BT43 218 aa11.35□□□□□ -0.59
GIN1-205ENST00000512248 BIVM-ERCC5R4GMW8 1640 aa11.35□□□□□ -0.59
GIN1-205ENST00000512248 CCER2I3L3R5 266 aa11.34□□□□□ -0.59
GIN1-205ENST00000512248 B4GALNT3Q6L9W6 998 aa11.33□□□□□ -0.6
GIN1-205ENST00000512248 TIAM1Q13009 1591 aa11.32□□□□□ -0.6
GIN1-205ENST00000512248 CDK11AQ9UQ88 783 aaPredicted RBP11.32□□□□□ -0.6
GIN1-205ENST00000512248 HSPA5P11021 654 aaKnown RBP11.3□□□□□ -0.6
GIN1-205ENST00000512248 MTUS2Q5JR59 1369 aa11.28□□□□□ -0.6
GIN1-205ENST00000512248 PODXL2Q9NZ53 605 aa11.28□□□□□ -0.6
GIN1-205ENST00000512248 WASHC2AQ641Q2 1341 aa11.27□□□□□ -0.61
GIN1-205ENST00000512248 CFTRP13569 1480 aa11.27□□□□□ -0.61
GIN1-205ENST00000512248 FGD5Q6ZNL6 1462 aa11.27□□□□□ -0.61
GIN1-205ENST00000512248 PTPRKQ15262 1439 aa11.26□□□□□ -0.61
GIN1-205ENST00000512248 C11orf95C9JLR9 678 aaPredicted RBP11.26□□□□□ -0.61
GIN1-205ENST00000512248 RAD54L2Q9Y4B4 1467 aa11.26□□□□□ -0.61
GIN1-205ENST00000512248 MRS2Q9HD23 443 aa11.25□□□□□ -0.61
GIN1-205ENST00000512248 NBR1Q14596 966 aa11.25□□□□□ -0.61
GIN1-205ENST00000512248 PCF11O94913 1555 aaKnown RBP11.24□□□□□ -0.61
GIN1-205ENST00000512248 ZNF326Q5BKZ1 582 aaKnown RBP11.24□□□□□ -0.61
GIN1-205ENST00000512248 CCDC136Q96JN2 1154 aa11.24□□□□□ -0.61
GIN1-205ENST00000512248 TIMELESSQ9UNS1 1208 aa11.24□□□□□ -0.61
GIN1-205ENST00000512248 AQRO60306 1485 aaKnown RBP eCLIP11.24□□□□□ -0.61
GIN1-205ENST00000512248 NCAPD3P42695 1498 aa11.24□□□□□ -0.61
GIN1-205ENST00000512248 FHAD1B1AJZ9 1412 aa11.24□□□□□ -0.61
GIN1-205ENST00000512248 CCDC18Q5T9S5 1454 aa11.23□□□□□ -0.61
GIN1-205ENST00000512248 ADRA2BP18089 450 aa11.22□□□□□ -0.61
GIN1-205ENST00000512248 EIF4G2P78344 907 aaKnown RBP eCLIP11.21□□□□□ -0.61
GIN1-205ENST00000512248 L3MBTL2Q969R5 705 aa11.21□□□□□ -0.61
GIN1-205ENST00000512248 FGD6Q6ZV73 1430 aa11.2□□□□□ -0.62
GIN1-205ENST00000512248 CADPSQ9ULU8 1353 aa11.2□□□□□ -0.62
GIN1-205ENST00000512248 TDRD9Q8NDG6 1382 aaKnown RBP11.19□□□□□ -0.62
GIN1-205ENST00000512248 PPP6R1Q9UPN7 881 aa11.19□□□□□ -0.62
GIN1-205ENST00000512248 SALL2Q9Y467 1007 aaPredicted RBP11.18□□□□□ -0.62
GIN1-205ENST00000512248 PPP4R2Q9NY27 417 aa11.18□□□□□ -0.62
GIN1-205ENST00000512248 PRKRIP1Q9H875 184 aaPredicted RBP11.16□□□□□ -0.62
GIN1-205ENST00000512248 NBPF8Q3BBV2 869 aa11.15□□□□□ -0.62
GIN1-205ENST00000512248 MPHOSPH9Q99550 1183 aa11.15□□□□□ -0.62
GIN1-205ENST00000512248 UACAQ9BZF9 1416 aa11.15□□□□□ -0.62
GIN1-205ENST00000512248 PAK3O75914 559 aaPredicted RBP11.15□□□□□ -0.62
GIN1-205ENST00000512248 NAIPQ13075 1403 aa11.15□□□□□ -0.62
GIN1-205ENST00000512248 UBE2Q2Q8WVN8 375 aa11.14□□□□□ -0.63
GIN1-205ENST00000512248 FANCIQ9NVI1 1328 aa11.14□□□□□ -0.63
GIN1-205ENST00000512248 HMGXB3Q12766 1538 aa11.13□□□□□ -0.63
GIN1-205ENST00000512248 MAP3K1Q13233 1512 aa11.13□□□□□ -0.63
GIN1-205ENST00000512248 CASKIN1Q8WXD9 1431 aa11.13□□□□□ -0.63
GIN1-205ENST00000512248 DEKP35659 375 aaKnown RBP11.12□□□□□ -0.63
GIN1-205ENST00000512248 NESP48681 1621 aa11.12□□□□□ -0.63
GIN1-205ENST00000512248 HFM1A2PYH4 1435 aa11.12□□□□□ -0.63
GIN1-205ENST00000512248 NPM2Q86SE8 214 aaKnown RBP11.11□□□□□ -0.63
GIN1-205ENST00000512248 NCOA2Q15596 1464 aa11.11□□□□□ -0.63
GIN1-205ENST00000512248 ZNF644Q9H582 1327 aaPredicted RBP11.11□□□□□ -0.63
GIN1-205ENST00000512248 FANCD2Q9BXW9 1451 aa11.11□□□□□ -0.63
GIN1-205ENST00000512248 PKNOX2Q96KN3 472 aa11.1□□□□□ -0.63
GIN1-205ENST00000512248 SLC4A1APQ9BWU0 796 aaKnown RBP11.1□□□□□ -0.63
GIN1-205ENST00000512248 FMN1Q68DA7 1419 aa11.1□□□□□ -0.63
GIN1-205ENST00000512248 AKNAQ7Z591 1439 aa11.1□□□□□ -0.63
GIN1-205ENST00000512248 ZNF777Q9ULD5 760 aaPredicted RBP11.09□□□□□ -0.63
GIN1-205ENST00000512248 FYCO1Q9BQS8 1478 aa11.09□□□□□ -0.63
GIN1-205ENST00000512248 DNAJC5BQ9UF47 199 aa11.09□□□□□ -0.63
GIN1-205ENST00000512248 KIF7Q2M1P5 1343 aa11.08□□□□□ -0.64
GIN1-205ENST00000512248 PTPN23Q9H3S7 1636 aa11.08□□□□□ -0.64
GIN1-205ENST00000512248 MYOM3Q5VTT5 1437 aa11.08□□□□□ -0.64
GIN1-205ENST00000512248 CCDC7Q96M83 1385 aa11.08□□□□□ -0.64
GIN1-205ENST00000512248 CFAP43Q8NDM7 1665 aa11.07□□□□□ -0.64
GIN1-205ENST00000512248 POLA1P09884 1462 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms