RNA–Protein interactions for RNA: ENST00000512146.6

SNCAIP-216, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,849 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-216ENST00000512146 RRBP1Q9P2E9 1410 aaKnown RBP22.43■■□□□ 1.18
SNCAIP-216ENST00000512146 CTTNBP2Q8WZ74 1663 aa22.4■■□□□ 1.18
SNCAIP-216ENST00000512146 TIAM1Q13009 1591 aa22.4■■□□□ 1.18
SNCAIP-216ENST00000512146 HNRNPUL2Q1KMD3 747 aaKnown RBP22.4■■□□□ 1.18
SNCAIP-216ENST00000512146 AQRO60306 1485 aaKnown RBP eCLIP22.37■■□□□ 1.17
SNCAIP-216ENST00000512146 WDR62O43379 1518 aa22.35■■□□□ 1.17
SNCAIP-216ENST00000512146 FHOD3Q2V2M9 1422 aa22.33■■□□□ 1.16
SNCAIP-216ENST00000512146 LRRC9Q6ZRR7 1453 aa22.32■■□□□ 1.16
SNCAIP-216ENST00000512146 FYCO1Q9BQS8 1478 aa22.32■■□□□ 1.16
SNCAIP-216ENST00000512146 PCF11O94913 1555 aaKnown RBP22.32■■□□□ 1.16
SNCAIP-216ENST00000512146 CASKIN1Q8WXD9 1431 aa22.32■■□□□ 1.16
SNCAIP-216ENST00000512146 IFT140Q96RY7 1462 aa22.3■■□□□ 1.16
SNCAIP-216ENST00000512146 SAMD9Q5K651 1589 aa22.29■■□□□ 1.16
SNCAIP-216ENST00000512146 CCNB3Q8WWL7 1395 aa22.29■■□□□ 1.16
SNCAIP-216ENST00000512146 CFAP43Q8NDM7 1665 aa22.28■■□□□ 1.16
SNCAIP-216ENST00000512146 FMN1Q68DA7 1419 aa22.28■■□□□ 1.16
SNCAIP-216ENST00000512146 P3H3Q8IVL6 736 aa22.27■■□□□ 1.16
SNCAIP-216ENST00000512146 PBRM1Q86U86 1689 aa22.26■■□□□ 1.15
SNCAIP-216ENST00000512146 GRIN2BQ13224 1484 aa22.26■■□□□ 1.15
SNCAIP-216ENST00000512146 ADAMTS12P58397 1594 aa22.24■■□□□ 1.15
SNCAIP-216ENST00000512146 SNAPC4Q5SXM2 1469 aa22.22■■□□□ 1.15
SNCAIP-216ENST00000512146 ZNF608Q9ULD9 1512 aaPredicted RBP22.18■■□□□ 1.14
SNCAIP-216ENST00000512146 CLSPNQ9HAW4 1339 aa22.16■■□□□ 1.14
SNCAIP-216ENST00000512146 PHLDB1Q86UU1 1377 aa22.16■■□□□ 1.14
SNCAIP-216ENST00000512146 ERCC6Q03468 1493 aa22.14■■□□□ 1.13
SNCAIP-216ENST00000512146 THOC2Q8NI27 1593 aaKnown RBP22.12■■□□□ 1.13
SNCAIP-216ENST00000512146 IQGAP2Q13576 1575 aa22.11■■□□□ 1.13
SNCAIP-216ENST00000512146 DHX57Q6P158 1386 aaKnown RBP22.11■■□□□ 1.13
SNCAIP-216ENST00000512146 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.08■■□□□ 1.13
SNCAIP-216ENST00000512146 ATP1B4Q9UN42 357 aaPredicted RBP22.08■■□□□ 1.12
SNCAIP-216ENST00000512146 UGGT2Q9NYU1 1516 aa22.06■■□□□ 1.12
SNCAIP-216ENST00000512146 EIF4G3O43432 1585 aaKnown RBP22.06■■□□□ 1.12
SNCAIP-216ENST00000512146 KIAA0586Q9BVV6 1533 aa22.03■■□□□ 1.12
SNCAIP-216ENST00000512146 MAGI1Q96QZ7 1491 aaPredicted RBP22.01■■□□□ 1.11
SNCAIP-216ENST00000512146 GRIN2AQ12879 1464 aa22■■□□□ 1.11
SNCAIP-216ENST00000512146 LRRIQ1Q96JM4 1722 aa21.99■■□□□ 1.11
SNCAIP-216ENST00000512146 MTUS2Q5JR59 1369 aa21.99■■□□□ 1.11
SNCAIP-216ENST00000512146 CCDC18Q5T9S5 1454 aa21.98■■□□□ 1.11
SNCAIP-216ENST00000512146 RAB3GAP2Q9H2M9 1393 aa21.95■■□□□ 1.11
SNCAIP-216ENST00000512146 FGD6Q6ZV73 1430 aa21.95■■□□□ 1.1
SNCAIP-216ENST00000512146 EHBP1L1Q8N3D4 1523 aa21.95■■□□□ 1.1
SNCAIP-216ENST00000512146 SETD5Q9C0A6 1442 aa21.95■■□□□ 1.1
SNCAIP-216ENST00000512146 ITGAEP38570 1179 aa21.94■■□□□ 1.1
SNCAIP-216ENST00000512146 HECW1Q76N89 1606 aa21.93■■□□□ 1.1
SNCAIP-216ENST00000512146 SYNJ2O15056 1496 aa21.93■■□□□ 1.1
SNCAIP-216ENST00000512146 ZNF316A6NFI3 1004 aaPredicted RBP21.92■■□□□ 1.1
SNCAIP-216ENST00000512146 FAM50AQ14320 339 aaKnown RBP21.92■■□□□ 1.1
SNCAIP-216ENST00000512146 ARHGEF11O15085 1522 aa21.92■■□□□ 1.1
SNCAIP-216ENST00000512146 DISP1Q96F81 1524 aa21.92■■□□□ 1.1
SNCAIP-216ENST00000512146 NCOA2Q15596 1464 aa21.92■■□□□ 1.1
SNCAIP-216ENST00000512146 EPRSP07814 1512 aaKnown RBP21.89■■□□□ 1.09
SNCAIP-216ENST00000512146 MYOM3Q5VTT5 1437 aa21.88■■□□□ 1.09
SNCAIP-216ENST00000512146 KIAA0556O60303 1618 aa21.88■■□□□ 1.09
SNCAIP-216ENST00000512146 MAGI3Q5TCQ9 1506 aa21.88■■□□□ 1.09
SNCAIP-216ENST00000512146 SUPT6HQ7KZ85 1726 aaKnown RBP21.87■■□□□ 1.09
SNCAIP-216ENST00000512146 DIEXFQ68CQ4 756 aaKnown RBP21.86■■□□□ 1.09
SNCAIP-216ENST00000512146 NUP160Q12769 1436 aa21.84■■□□□ 1.09
SNCAIP-216ENST00000512146 CHMP7Q8WUX9 453 aaPredicted RBP21.83■■□□□ 1.09
SNCAIP-216ENST00000512146 CEP170Q5SW79 1584 aa21.83■■□□□ 1.09
SNCAIP-216ENST00000512146 MAPKBP1O60336 1514 aa21.82■■□□□ 1.08
SNCAIP-216ENST00000512146 TCOF1Q13428 1488 aaKnown RBP21.78■■□□□ 1.08
SNCAIP-216ENST00000512146 CDK13Q14004 1512 aaKnown RBP21.78■■□□□ 1.08
SNCAIP-216ENST00000512146 PTPRKQ15262 1439 aa21.77■■□□□ 1.07
SNCAIP-216ENST00000512146 HFM1A2PYH4 1435 aa21.75■■□□□ 1.07
SNCAIP-216ENST00000512146 NUP153P49790 1475 aaKnown RBP21.75■■□□□ 1.07
SNCAIP-216ENST00000512146 MIA2Q96PC5 1412 aa21.74■■□□□ 1.07
SNCAIP-216ENST00000512146 PTPN23Q9H3S7 1636 aa21.73■■□□□ 1.07
SNCAIP-216ENST00000512146 RAPGEF6Q8TEU7 1601 aa21.72■■□□□ 1.07
SNCAIP-216ENST00000512146 CARMIL2Q6F5E8 1435 aa21.7■■□□□ 1.06
SNCAIP-216ENST00000512146 JPH4Q96JJ6 628 aa21.69■■□□□ 1.06
SNCAIP-216ENST00000512146 NAIPQ13075 1403 aa21.67■■□□□ 1.06
SNCAIP-216ENST00000512146 FBLN2P98095 1184 aa21.67■■□□□ 1.06
SNCAIP-216ENST00000512146 AKNAQ7Z591 1439 aa21.65■■□□□ 1.06
SNCAIP-216ENST00000512146 TIMELESSQ9UNS1 1208 aa21.64■■□□□ 1.05
SNCAIP-216ENST00000512146 CDK11AQ9UQ88 783 aaPredicted RBP21.63■■□□□ 1.05
SNCAIP-216ENST00000512146 UACAQ9BZF9 1416 aa21.62■■□□□ 1.05
SNCAIP-216ENST00000512146 PLB1Q6P1J6 1458 aa21.61■■□□□ 1.05
SNCAIP-216ENST00000512146 TROQ12816 1431 aaPredicted RBP21.59■■□□□ 1.05
SNCAIP-216ENST00000512146 ARID3CA6NKF2 412 aa21.58■■□□□ 1.05
SNCAIP-216ENST00000512146 ABCA8O94911 1581 aa21.56■■□□□ 1.04
SNCAIP-216ENST00000512146 PRG4Q92954 1404 aaPredicted RBP21.53■■□□□ 1.04
SNCAIP-216ENST00000512146 SIN3AQ96ST3 1273 aa21.52■■□□□ 1.04
SNCAIP-216ENST00000512146 GCC2Q8IWJ2 1684 aa21.52■■□□□ 1.04
SNCAIP-216ENST00000512146 ROCK1Q13464 1354 aa21.51■■□□□ 1.03
SNCAIP-216ENST00000512146 ADCY10Q96PN6 1610 aa21.51■■□□□ 1.03
SNCAIP-216ENST00000512146 DAPK1P53355 1430 aa21.48■■□□□ 1.03
SNCAIP-216ENST00000512146 ABCC5O15440 1437 aa21.47■■□□□ 1.03
SNCAIP-216ENST00000512146 DNMT1P26358 1616 aaKnown RBP21.47■■□□□ 1.03
SNCAIP-216ENST00000512146 ACIN1Q9UKV3 1341 aaKnown RBP21.47■■□□□ 1.03
SNCAIP-216ENST00000512146 GPATCH8Q9UKJ3 1502 aaKnown RBP21.46■■□□□ 1.03
SNCAIP-216ENST00000512146 ATP10BO94823 1461 aa21.46■■□□□ 1.03
SNCAIP-216ENST00000512146 RRP7BPQ9NSQ0 103 aa21.45■■□□□ 1.03
SNCAIP-216ENST00000512146 NEUROD1Q13562 356 aa21.45■■□□□ 1.02
SNCAIP-216ENST00000512146 MIER1Q8N108 512 aa21.44■■□□□ 1.02
SNCAIP-216ENST00000512146 CHIC2Q9UKJ5 165 aa21.44■■□□□ 1.02
SNCAIP-216ENST00000512146 PTPRGP23470 1445 aa21.43■■□□□ 1.02
SNCAIP-216ENST00000512146 CHD1O14646 1710 aa21.42■■□□□ 1.02
SNCAIP-216ENST00000512146 SHROOM2Q13796 1616 aa21.42■■□□□ 1.02
SNCAIP-216ENST00000512146 ITSN2Q9NZM3 1697 aa21.42■■□□□ 1.02
SNCAIP-216ENST00000512146 PPP1R15AO75807 674 aaPredicted RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms