RNA–Protein interactions for RNA: ENST00000511463.1

APBB3-218, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 3

Gene APBB3, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-218	ENST00000511463	ARAP1	Q96P48	1450 aa		30.43	■■■□□ 2.46
APBB3-218	ENST00000511463	KIAA0586	Q9BVV6	1533 aa		30.42	■■■□□ 2.46
APBB3-218	ENST00000511463	PRX	Q9BXM0	1461 aa		30.38	■■■□□ 2.45
APBB3-218	ENST00000511463	ERCC6L2	Q5T890	1561 aa		30.35	■■■□□ 2.45
APBB3-218	ENST00000511463	IQGAP2	Q13576	1575 aa		30.3	■■■□□ 2.44
APBB3-218	ENST00000511463	CYB5RL	Q6IPT4	315 aa		30.3	■■■□□ 2.44
APBB3-218	ENST00000511463	CSRNP3	Q8WYN3	585 aa		30.3	■■■□□ 2.44
APBB3-218	ENST00000511463	JPH4	Q96JJ6	628 aa		30.3	■■■□□ 2.44
APBB3-218	ENST00000511463	PRG4	Q92954	1404 aa	Predicted RBP	30.3	■■■□□ 2.44
APBB3-218	ENST00000511463	CTTNBP2	Q8WZ74	1663 aa		30.27	■■■□□ 2.44
APBB3-218	ENST00000511463	FAM9A	Q8IZU1	332 aa	Predicted RBP	30.2	■■■□□ 2.43
APBB3-218	ENST00000511463	KIF21B	O75037	1637 aa		30.14	■■■□□ 2.42
APBB3-218	ENST00000511463	UGGT2	Q9NYU1	1516 aa		30.12	■■■□□ 2.41
APBB3-218	ENST00000511463	CARMIL2	Q6F5E8	1435 aa		30.1	■■■□□ 2.41
APBB3-218	ENST00000511463	DISP1	Q96F81	1524 aa		30.04	■■■□□ 2.4
APBB3-218	ENST00000511463	KIAA0556	O60303	1618 aa		30.02	■■■□□ 2.4
APBB3-218	ENST00000511463	TNIK	Q9UKE5	1360 aa		29.97	■■■□□ 2.39
APBB3-218	ENST00000511463	GOLGA3	Q08378	1498 aa		29.96	■■■□□ 2.39
APBB3-218	ENST00000511463	PTPRG	P23470	1445 aa		29.93	■■■□□ 2.38
APBB3-218	ENST00000511463	ADCY10	Q96PN6	1610 aa		29.87	■■■□□ 2.37
APBB3-218	ENST00000511463	SAMD9	Q5K651	1589 aa		29.85	■■■□□ 2.37
APBB3-218	ENST00000511463	TTBK1	Q5TCY1	1321 aa	Predicted RBP	29.84	■■■□□ 2.37
APBB3-218	ENST00000511463	EHMT2	Q96KQ7	1210 aa		29.79	■■■□□ 2.36
APBB3-218	ENST00000511463	UBTF	P17480	764 aa	Known RBP	29.78	■■■□□ 2.36
APBB3-218	ENST00000511463	UACA	Q9BZF9	1416 aa		29.76	■■■□□ 2.35
APBB3-218	ENST00000511463	UHRF1BP1L	A0JNW5	1464 aa		29.75	■■■□□ 2.35
APBB3-218	ENST00000511463	ABCC2	Q92887	1545 aa		29.75	■■■□□ 2.35
APBB3-218	ENST00000511463	EFCAB5	A4FU69	1503 aa		29.74	■■■□□ 2.35
APBB3-218	ENST00000511463	NPM1	P06748	294 aa	Known RBP eCLIP	29.71	■■■□□ 2.35
APBB3-218	ENST00000511463	RANGAP1	P46060	587 aa	Predicted RBP	29.69	■■■□□ 2.34
APBB3-218	ENST00000511463	MAPKBP1	O60336	1514 aa		29.69	■■■□□ 2.34
APBB3-218	ENST00000511463	TRH	P20396	242 aa	Predicted RBP	29.68	■■■□□ 2.34
APBB3-218	ENST00000511463	P3H3	Q8IVL6	736 aa		29.67	■■■□□ 2.34
APBB3-218	ENST00000511463	ABCA8	O94911	1581 aa		29.66	■■■□□ 2.34
APBB3-218	ENST00000511463	PLB1	Q6P1J6	1458 aa		29.66	■■■□□ 2.34
APBB3-218	ENST00000511463	FHOD3	Q2V2M9	1422 aa		29.62	■■■□□ 2.33
APBB3-218	ENST00000511463	KDM5B	Q9UGL1	1544 aa		29.6	■■■□□ 2.33
APBB3-218	ENST00000511463	ZCCHC11	Q5TAX3	1644 aa	Known RBP	29.58	■■■□□ 2.33
APBB3-218	ENST00000511463	RAPGEF6	Q8TEU7	1601 aa		29.54	■■■□□ 2.32
APBB3-218	ENST00000511463	ARHGAP35	Q9NRY4	1499 aa		29.54	■■■□□ 2.32
APBB3-218	ENST00000511463	KIF13A	Q9H1H9	1805 aa		29.52	■■■□□ 2.32
APBB3-218	ENST00000511463	DIP2B	Q9P265	1576 aa		29.51	■■■□□ 2.31
APBB3-218	ENST00000511463	ABCC10	Q5T3U5	1492 aa		29.5	■■■□□ 2.31
APBB3-218	ENST00000511463	ASXL2	Q76L83	1435 aa		29.48	■■■□□ 2.31
APBB3-218	ENST00000511463	FMN1	Q68DA7	1419 aa		29.42	■■■□□ 2.3
APBB3-218	ENST00000511463	NUP153	P49790	1475 aa	Known RBP	29.4	■■■□□ 2.3
APBB3-218	ENST00000511463	CLIP1	P30622	1438 aa		29.38	■■■□□ 2.29
APBB3-218	ENST00000511463	WDR7	Q9Y4E6	1490 aa		29.38	■■■□□ 2.29
APBB3-218	ENST00000511463	FAM69C	Q0P6D2	419 aa		29.38	■■■□□ 2.29
APBB3-218	ENST00000511463	ATP10B	O94823	1461 aa		29.36	■■■□□ 2.29
APBB3-218	ENST00000511463	GLI2	P10070	1586 aa		29.35	■■■□□ 2.29
APBB3-218	ENST00000511463	EPRS	P07814	1512 aa	Known RBP	29.33	■■■□□ 2.29
APBB3-218	ENST00000511463	HECW1	Q76N89	1606 aa		29.33	■■■□□ 2.29
APBB3-218	ENST00000511463	ARID3C	A6NKF2	412 aa		29.32	■■■□□ 2.28
APBB3-218	ENST00000511463	CEP162	Q5TB80	1403 aa		29.28	■■■□□ 2.28
APBB3-218	ENST00000511463	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	29.24	■■■□□ 2.27
APBB3-218	ENST00000511463	HNRNPUL2	Q1KMD3	747 aa	Known RBP	29.24	■■■□□ 2.27
APBB3-218	ENST00000511463	PCF11	O94913	1555 aa	Known RBP	29.23	■■■□□ 2.27
APBB3-218	ENST00000511463	LOC105371045	A0A1W2PR82	267 aa		29.23	■■■□□ 2.27
APBB3-218	ENST00000511463	MAP3K4	Q9Y6R4	1608 aa		29.23	■■■□□ 2.27
APBB3-218	ENST00000511463	TSPOAP1	O95153	1857 aa		29.21	■■■□□ 2.27
APBB3-218	ENST00000511463	CDK13	Q14004	1512 aa	Known RBP	29.2	■■■□□ 2.26
APBB3-218	ENST00000511463	CASKIN1	Q8WXD9	1431 aa		29.19	■■■□□ 2.26
APBB3-218	ENST00000511463	ATP1B4	Q9UN42	357 aa	Predicted RBP	29.17	■■■□□ 2.26
APBB3-218	ENST00000511463	CFAP43	Q8NDM7	1665 aa		29.17	■■■□□ 2.26
APBB3-218	ENST00000511463	FYCO1	Q9BQS8	1478 aa		29.16	■■■□□ 2.26
APBB3-218	ENST00000511463	PPRC1	Q5VV67	1664 aa	Known RBP	29.15	■■■□□ 2.26
APBB3-218	ENST00000511463	LRRIQ1	Q96JM4	1722 aa		29.14	■■■□□ 2.26
APBB3-218	ENST00000511463	KCNH8	Q96L42	1107 aa		29.14	■■■□□ 2.26
APBB3-218	ENST00000511463	CCDC18	Q5T9S5	1454 aa		29.11	■■■□□ 2.25
APBB3-218	ENST00000511463	ABCA9	Q8IUA7	1624 aa		29.1	■■■□□ 2.25
APBB3-218	ENST00000511463	PLEKHD1	A6NEE1	506 aa		29.09	■■■□□ 2.25
APBB3-218	ENST00000511463	TEX14	Q8IWB6	1497 aa		29.08	■■■□□ 2.25
APBB3-218	ENST00000511463	CD109	Q6YHK3	1445 aa		29.06	■■■□□ 2.24
APBB3-218	ENST00000511463	MAGI3	Q5TCQ9	1506 aa		29.03	■■■□□ 2.24
APBB3-218	ENST00000511463	KDM6B	O15054	1643 aa		29.02	■■■□□ 2.24
APBB3-218	ENST00000511463	CDK11A	Q9UQ88	783 aa	Predicted RBP	29.02	■■■□□ 2.24
APBB3-218	ENST00000511463	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	28.97	■■■□□ 2.23
APBB3-218	ENST00000511463	TRO	Q12816	1431 aa	Predicted RBP	28.96	■■■□□ 2.23
APBB3-218	ENST00000511463	KIF14	Q15058	1648 aa		28.96	■■■□□ 2.23
APBB3-218	ENST00000511463	TTC37	Q6PGP7	1564 aa		28.95	■■■□□ 2.22
APBB3-218	ENST00000511463	VPS8	Q8N3P4	1428 aa		28.93	■■■□□ 2.22
APBB3-218	ENST00000511463	CFAP74	Q9C0B2	1584 aa		28.84	■■■□□ 2.21
APBB3-218	ENST00000511463	NEO1	Q92859	1461 aa		28.84	■■■□□ 2.21
APBB3-218	ENST00000511463	MYO5C	Q9NQX4	1742 aa		28.83	■■■□□ 2.21
APBB3-218	ENST00000511463	COL17A1	Q9UMD9	1497 aa	Predicted RBP	28.8	■■■□□ 2.2
APBB3-218	ENST00000511463	PHLDB1	Q86UU1	1377 aa		28.8	■■■□□ 2.2
APBB3-218	ENST00000511463	EHBP1L1	Q8N3D4	1523 aa		28.78	■■■□□ 2.2
APBB3-218	ENST00000511463	ARAP3	Q8WWN8	1544 aa		28.78	■■■□□ 2.2
APBB3-218	ENST00000511463	FANCA	O15360	1455 aa		28.78	■■■□□ 2.2
APBB3-218	ENST00000511463	TIAM1	Q13009	1591 aa		28.77	■■■□□ 2.2
APBB3-218	ENST00000511463	PLCH2	O75038	1416 aa		28.77	■■■□□ 2.2
APBB3-218	ENST00000511463	MTUS2	Q5JR59	1369 aa		28.75	■■■□□ 2.19
APBB3-218	ENST00000511463	PREX2	Q70Z35	1606 aa		28.72	■■■□□ 2.19
APBB3-218	ENST00000511463	AKNA	Q7Z591	1439 aa		28.69	■■■□□ 2.18
APBB3-218	ENST00000511463	ARHGAP5	Q13017	1502 aa		28.69	■■■□□ 2.18
APBB3-218	ENST00000511463	MAP3K1	Q13233	1512 aa		28.69	■■■□□ 2.18
APBB3-218	ENST00000511463	CDC42BPA	Q5VT25	1732 aa		28.68	■■■□□ 2.18
APBB3-218	ENST00000511463	CDC42BPB	Q9Y5S2	1711 aa		28.67	■■■□□ 2.18
APBB3-218	ENST00000511463	EFCAB2	Q5VUJ9	269 aa		28.63	■■■□□ 2.17

Retrieved 100 of 20,778 RNA–protein pairs in 265.3 ms