RNA–Protein interactions for RNA: ENST00000511355.5

NME1-209, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 5 BASIC

Gene NME1, Length 1,645 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-209ENST00000511355 KIF21BO75037 1637 aa22.17■■□□□ 1.14
NME1-209ENST00000511355 PRXQ9BXM0 1461 aa22.14■■□□□ 1.14
NME1-209ENST00000511355 CARMIL1Q5VZK9 1371 aa22.08■■□□□ 1.13
NME1-209ENST00000511355 ADAMTS12P58397 1594 aa22.08■■□□□ 1.12
NME1-209ENST00000511355 GOLGA3Q08378 1498 aa22.08■■□□□ 1.12
NME1-209ENST00000511355 ZEB1P37275 1124 aaPredicted RBP22.06■■□□□ 1.12
NME1-209ENST00000511355 GRIN2AQ12879 1464 aa22.05■■□□□ 1.12
NME1-209ENST00000511355 RAPGEF2Q9Y4G8 1499 aa22.05■■□□□ 1.12
NME1-209ENST00000511355 FHAD1B1AJZ9 1412 aa22.04■■□□□ 1.12
NME1-209ENST00000511355 TRHP20396 242 aaPredicted RBP22.02■■□□□ 1.11
NME1-209ENST00000511355 NUP160Q12769 1436 aa21.97■■□□□ 1.11
NME1-209ENST00000511355 CEP170Q5SW79 1584 aa21.92■■□□□ 1.1
NME1-209ENST00000511355 EHMT2Q96KQ7 1210 aa21.9■■□□□ 1.1
NME1-209ENST00000511355 TNIKQ9UKE5 1360 aa21.89■■□□□ 1.1
NME1-209ENST00000511355 UBTFP17480 764 aaKnown RBP21.88■■□□□ 1.09
NME1-209ENST00000511355 SHROOM2Q13796 1616 aa21.85■■□□□ 1.09
NME1-209ENST00000511355 CTTNBP2Q8WZ74 1663 aa21.85■■□□□ 1.09
NME1-209ENST00000511355 ERCC6L2Q5T890 1561 aa21.81■■□□□ 1.08
NME1-209ENST00000511355 JPH4Q96JJ6 628 aa21.77■■□□□ 1.08
NME1-209ENST00000511355 PRG4Q92954 1404 aaPredicted RBP21.75■■□□□ 1.07
NME1-209ENST00000511355 CEP162Q5TB80 1403 aa21.74■■□□□ 1.07
NME1-209ENST00000511355 IQGAP2Q13576 1575 aa21.73■■□□□ 1.07
NME1-209ENST00000511355 KIAA0586Q9BVV6 1533 aa21.73■■□□□ 1.07
NME1-209ENST00000511355 CLIP1P30622 1438 aa21.67■■□□□ 1.06
NME1-209ENST00000511355 PPARGC1BQ86YN6 1023 aaKnown RBP21.67■■□□□ 1.06
NME1-209ENST00000511355 EFCAB5A4FU69 1503 aa21.64■■□□□ 1.05
NME1-209ENST00000511355 UGGT2Q9NYU1 1516 aa21.62■■□□□ 1.05
NME1-209ENST00000511355 NPM1P06748 294 aaKnown RBP eCLIP21.6■■□□□ 1.05
NME1-209ENST00000511355 SAMD9Q5K651 1589 aa21.6■■□□□ 1.05
NME1-209ENST00000511355 ARHGAP35Q9NRY4 1499 aa21.59■■□□□ 1.05
NME1-209ENST00000511355 RANGAP1P46060 587 aaPredicted RBP21.55■■□□□ 1.04
NME1-209ENST00000511355 KIAA0556O60303 1618 aa21.52■■□□□ 1.03
NME1-209ENST00000511355 DISP1Q96F81 1524 aa21.5■■□□□ 1.03
NME1-209ENST00000511355 CARMIL2Q6F5E8 1435 aa21.5■■□□□ 1.03
NME1-209ENST00000511355 MAPKBP1O60336 1514 aa21.47■■□□□ 1.03
NME1-209ENST00000511355 PTPRGP23470 1445 aa21.45■■□□□ 1.02
NME1-209ENST00000511355 KIF13AQ9H1H9 1805 aa21.45■■□□□ 1.02
NME1-209ENST00000511355 ADCY10Q96PN6 1610 aa21.45■■□□□ 1.02
NME1-209ENST00000511355 FHOD3Q2V2M9 1422 aa21.45■■□□□ 1.02
NME1-209ENST00000511355 VPS8Q8N3P4 1428 aa21.45■■□□□ 1.02
NME1-209ENST00000511355 ABCC10Q5T3U5 1492 aa21.43■■□□□ 1.02
NME1-209ENST00000511355 FAM69CQ0P6D2 419 aa21.41■■□□□ 1.02
NME1-209ENST00000511355 FMN1Q68DA7 1419 aa21.4■■□□□ 1.02
NME1-209ENST00000511355 P3H3Q8IVL6 736 aa21.39■■□□□ 1.01
NME1-209ENST00000511355 DIP2BQ9P265 1576 aa21.35■■□□□ 1.01
NME1-209ENST00000511355 AEBP2Q6ZN18 517 aaPredicted RBP21.35■■□□□ 1.01
NME1-209ENST00000511355 TTBK1Q5TCY1 1321 aaPredicted RBP21.33■■□□□ 1
NME1-209ENST00000511355 PCF11O94913 1555 aaKnown RBP21.32■■□□□ 1
NME1-209ENST00000511355 UHRF1BP1LA0JNW5 1464 aa21.32■■□□□ 1
NME1-209ENST00000511355 ABCC2Q92887 1545 aa21.31■■□□□ 1
NME1-209ENST00000511355 FYCO1Q9BQS8 1478 aa21.31■■□□□ 1
NME1-209ENST00000511355 CASKIN1Q8WXD9 1431 aa21.29■■□□□ 1
NME1-209ENST00000511355 UACAQ9BZF9 1416 aa21.29■■□□□ 1
NME1-209ENST00000511355 PLB1Q6P1J6 1458 aa21.26■□□□□ 0.99
NME1-209ENST00000511355 HECW1Q76N89 1606 aa21.25■□□□□ 0.99
NME1-209ENST00000511355 RAPGEF6Q8TEU7 1601 aa21.25■□□□□ 0.99
NME1-209ENST00000511355 ABCA8O94911 1581 aa21.22■□□□□ 0.99
NME1-209ENST00000511355 ASXL2Q76L83 1435 aa21.22■□□□□ 0.99
NME1-209ENST00000511355 MAP3K1Q13233 1512 aa21.2■□□□□ 0.98
NME1-209ENST00000511355 GLI2P10070 1586 aa21.19■□□□□ 0.98
NME1-209ENST00000511355 KDM5BQ9UGL1 1544 aa21.18■□□□□ 0.98
NME1-209ENST00000511355 CFAP43Q8NDM7 1665 aa21.18■□□□□ 0.98
NME1-209ENST00000511355 KDM6BO15054 1643 aa21.18■□□□□ 0.98
NME1-209ENST00000511355 TSPOAP1O95153 1857 aa21.17■□□□□ 0.98
NME1-209ENST00000511355 CCDC18Q5T9S5 1454 aa21.17■□□□□ 0.98
NME1-209ENST00000511355 NUP153P49790 1475 aaKnown RBP21.16■□□□□ 0.98
NME1-209ENST00000511355 TIAM1Q13009 1591 aa21.16■□□□□ 0.98
NME1-209ENST00000511355 LRRIQ1Q96JM4 1722 aa21.16■□□□□ 0.98
NME1-209ENST00000511355 APLP2Q06481 763 aa21.15■□□□□ 0.98
NME1-209ENST00000511355 EPRSP07814 1512 aaKnown RBP21.13■□□□□ 0.97
NME1-209ENST00000511355 ZCCHC11Q5TAX3 1644 aaKnown RBP21.12■□□□□ 0.97
NME1-209ENST00000511355 CCER1Q8TC90 406 aaPredicted RBP21.11■□□□□ 0.97
NME1-209ENST00000511355 ATP1B4Q9UN42 357 aaPredicted RBP21.11■□□□□ 0.97
NME1-209ENST00000511355 CDK13Q14004 1512 aaKnown RBP21.06■□□□□ 0.96
NME1-209ENST00000511355 TEX14Q8IWB6 1497 aa21.05■□□□□ 0.96
NME1-209ENST00000511355 LRRC9Q6ZRR7 1453 aa21.04■□□□□ 0.96
NME1-209ENST00000511355 WDR7Q9Y4E6 1490 aa21.04■□□□□ 0.96
NME1-209ENST00000511355 MAP3K4Q9Y6R4 1608 aa21.03■□□□□ 0.96
NME1-209ENST00000511355 PPRC1Q5VV67 1664 aaKnown RBP21.03■□□□□ 0.96
NME1-209ENST00000511355 ATP10BO94823 1461 aa21.02■□□□□ 0.96
NME1-209ENST00000511355 EHBP1L1Q8N3D4 1523 aa21■□□□□ 0.95
NME1-209ENST00000511355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.99■□□□□ 0.95
NME1-209ENST00000511355 KANK4Q5T7N3 995 aaPredicted RBP20.97■□□□□ 0.95
NME1-209ENST00000511355 MAGI3Q5TCQ9 1506 aa20.97■□□□□ 0.95
NME1-209ENST00000511355 MTUS2Q5JR59 1369 aa20.97■□□□□ 0.95
NME1-209ENST00000511355 ARID3CA6NKF2 412 aa20.96■□□□□ 0.95
NME1-209ENST00000511355 CDK11AQ9UQ88 783 aaPredicted RBP20.96■□□□□ 0.95
NME1-209ENST00000511355 HNRNPUL2Q1KMD3 747 aaKnown RBP20.93■□□□□ 0.94
NME1-209ENST00000511355 TROQ12816 1431 aaPredicted RBP20.92■□□□□ 0.94
NME1-209ENST00000511355 SUPT6HQ7KZ85 1726 aaKnown RBP20.92■□□□□ 0.94
NME1-209ENST00000511355 KCNH8Q96L42 1107 aa20.92■□□□□ 0.94
NME1-209ENST00000511355 CD109Q6YHK3 1445 aa20.91■□□□□ 0.94
NME1-209ENST00000511355 KDM4FA0A1W2PPD8 638 aa20.88■□□□□ 0.93
NME1-209ENST00000511355 PELP1Q8IZL8 1130 aaKnown RBP20.88■□□□□ 0.93
NME1-209ENST00000511355 PLEKHD1A6NEE1 506 aa20.87■□□□□ 0.93
NME1-209ENST00000511355 KIF14Q15058 1648 aa20.86■□□□□ 0.93
NME1-209ENST00000511355 COL17A1Q9UMD9 1497 aaPredicted RBP20.86■□□□□ 0.93
NME1-209ENST00000511355 NCOA2Q15596 1464 aa20.85■□□□□ 0.93
NME1-209ENST00000511355 CLSPNQ9HAW4 1339 aa20.81■□□□□ 0.92
NME1-209ENST00000511355 PHLDB1Q86UU1 1377 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms