RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 PRXQ9BXM0 1461 aa21.46■■□□□ 1.03
COL6A6-203ENST00000511332 ARHGEF11O15085 1522 aa21.45■■□□□ 1.02
COL6A6-203ENST00000511332 KIF21BO75037 1637 aa21.41■■□□□ 1.02
COL6A6-203ENST00000511332 KIAA0586Q9BVV6 1533 aa21.4■■□□□ 1.02
COL6A6-203ENST00000511332 CSRNP3Q8WYN3 585 aa21.4■■□□□ 1.02
COL6A6-203ENST00000511332 IQGAP2Q13576 1575 aa21.39■■□□□ 1.01
COL6A6-203ENST00000511332 FAM9AQ8IZU1 332 aaPredicted RBP21.33■■□□□ 1.01
COL6A6-203ENST00000511332 ERCC6L2Q5T890 1561 aa21.28■■□□□ 1
COL6A6-203ENST00000511332 ARAP1Q96P48 1450 aa21.27■■□□□ 1
COL6A6-203ENST00000511332 PRG4Q92954 1404 aaPredicted RBP21.26■□□□□ 0.99
COL6A6-203ENST00000511332 UGGT2Q9NYU1 1516 aa21.24■□□□□ 0.99
COL6A6-203ENST00000511332 JPH4Q96JJ6 628 aa21.24■□□□□ 0.99
COL6A6-203ENST00000511332 GOLGA3Q08378 1498 aa21.23■□□□□ 0.99
COL6A6-203ENST00000511332 CARMIL2Q6F5E8 1435 aa21.19■□□□□ 0.98
COL6A6-203ENST00000511332 KIAA0556O60303 1618 aa21.18■□□□□ 0.98
COL6A6-203ENST00000511332 DISP1Q96F81 1524 aa21.14■□□□□ 0.98
COL6A6-203ENST00000511332 SAMD9Q5K651 1589 aa21.11■□□□□ 0.97
COL6A6-203ENST00000511332 CYB5RLQ6IPT4 315 aa21.1■□□□□ 0.97
COL6A6-203ENST00000511332 TNIKQ9UKE5 1360 aa21.07■□□□□ 0.96
COL6A6-203ENST00000511332 EFCAB5A4FU69 1503 aa21.06■□□□□ 0.96
COL6A6-203ENST00000511332 UBTFP17480 764 aaKnown RBP21.04■□□□□ 0.96
COL6A6-203ENST00000511332 AEBP2Q6ZN18 517 aaPredicted RBP21.04■□□□□ 0.96
COL6A6-203ENST00000511332 EHMT2Q96KQ7 1210 aa21.01■□□□□ 0.95
COL6A6-203ENST00000511332 PTPRGP23470 1445 aa21.01■□□□□ 0.95
COL6A6-203ENST00000511332 ADCY10Q96PN6 1610 aa21■□□□□ 0.95
COL6A6-203ENST00000511332 ABCC2Q92887 1545 aa20.94■□□□□ 0.94
COL6A6-203ENST00000511332 UHRF1BP1LA0JNW5 1464 aa20.92■□□□□ 0.94
COL6A6-203ENST00000511332 ABCA8O94911 1581 aa20.91■□□□□ 0.94
COL6A6-203ENST00000511332 TTBK1Q5TCY1 1321 aaPredicted RBP20.91■□□□□ 0.94
COL6A6-203ENST00000511332 UACAQ9BZF9 1416 aa20.91■□□□□ 0.94
COL6A6-203ENST00000511332 FHOD3Q2V2M9 1422 aa20.89■□□□□ 0.94
COL6A6-203ENST00000511332 RANGAP1P46060 587 aaPredicted RBP20.89■□□□□ 0.93
COL6A6-203ENST00000511332 ARHGAP35Q9NRY4 1499 aa20.88■□□□□ 0.93
COL6A6-203ENST00000511332 RAPGEF6Q8TEU7 1601 aa20.88■□□□□ 0.93
COL6A6-203ENST00000511332 PLB1Q6P1J6 1458 aa20.86■□□□□ 0.93
COL6A6-203ENST00000511332 P3H3Q8IVL6 736 aa20.85■□□□□ 0.93
COL6A6-203ENST00000511332 ZCCHC11Q5TAX3 1644 aaKnown RBP20.85■□□□□ 0.93
COL6A6-203ENST00000511332 MAPKBP1O60336 1514 aa20.84■□□□□ 0.93
COL6A6-203ENST00000511332 CLIP1P30622 1438 aa20.81■□□□□ 0.92
COL6A6-203ENST00000511332 KDM5BQ9UGL1 1544 aa20.81■□□□□ 0.92
COL6A6-203ENST00000511332 FMN1Q68DA7 1419 aa20.8■□□□□ 0.92
COL6A6-203ENST00000511332 NPM1P06748 294 aaKnown RBP eCLIP20.8■□□□□ 0.92
COL6A6-203ENST00000511332 CEP162Q5TB80 1403 aa20.78■□□□□ 0.92
COL6A6-203ENST00000511332 HECW1Q76N89 1606 aa20.77■□□□□ 0.92
COL6A6-203ENST00000511332 KIF13AQ9H1H9 1805 aa20.74■□□□□ 0.91
COL6A6-203ENST00000511332 LOC105371045A0A1W2PR82 267 aa20.72■□□□□ 0.91
COL6A6-203ENST00000511332 NUP153P49790 1475 aaKnown RBP20.72■□□□□ 0.91
COL6A6-203ENST00000511332 PCF11O94913 1555 aaKnown RBP20.72■□□□□ 0.91
COL6A6-203ENST00000511332 DIP2BQ9P265 1576 aa20.71■□□□□ 0.91
COL6A6-203ENST00000511332 ASXL2Q76L83 1435 aa20.69■□□□□ 0.9
COL6A6-203ENST00000511332 LRRIQ1Q96JM4 1722 aa20.67■□□□□ 0.9
COL6A6-203ENST00000511332 ABCC10Q5T3U5 1492 aa20.66■□□□□ 0.9
COL6A6-203ENST00000511332 FYCO1Q9BQS8 1478 aa20.66■□□□□ 0.9
COL6A6-203ENST00000511332 ATP10BO94823 1461 aa20.65■□□□□ 0.9
COL6A6-203ENST00000511332 WDR7Q9Y4E6 1490 aa20.65■□□□□ 0.9
COL6A6-203ENST00000511332 CASKIN1Q8WXD9 1431 aa20.63■□□□□ 0.89
COL6A6-203ENST00000511332 TRHP20396 242 aaPredicted RBP20.63■□□□□ 0.89
COL6A6-203ENST00000511332 GLI2P10070 1586 aa20.61■□□□□ 0.89
COL6A6-203ENST00000511332 EPRSP07814 1512 aaKnown RBP20.61■□□□□ 0.89
COL6A6-203ENST00000511332 CDK13Q14004 1512 aaKnown RBP20.6■□□□□ 0.89
COL6A6-203ENST00000511332 CCDC18Q5T9S5 1454 aa20.6■□□□□ 0.89
COL6A6-203ENST00000511332 ARID3CA6NKF2 412 aa20.57■□□□□ 0.88
COL6A6-203ENST00000511332 CFAP43Q8NDM7 1665 aa20.57■□□□□ 0.88
COL6A6-203ENST00000511332 MAP3K4Q9Y6R4 1608 aa20.56■□□□□ 0.88
COL6A6-203ENST00000511332 TSPOAP1O95153 1857 aa20.54■□□□□ 0.88
COL6A6-203ENST00000511332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.54■□□□□ 0.88
COL6A6-203ENST00000511332 HNRNPUL2Q1KMD3 747 aaKnown RBP20.54■□□□□ 0.88
COL6A6-203ENST00000511332 ATP1B4Q9UN42 357 aaPredicted RBP20.53■□□□□ 0.88
COL6A6-203ENST00000511332 VPS8Q8N3P4 1428 aa20.53■□□□□ 0.88
COL6A6-203ENST00000511332 FAM69CQ0P6D2 419 aa20.52■□□□□ 0.88
COL6A6-203ENST00000511332 ABCA9Q8IUA7 1624 aa20.51■□□□□ 0.87
COL6A6-203ENST00000511332 PPRC1Q5VV67 1664 aaKnown RBP20.49■□□□□ 0.87
COL6A6-203ENST00000511332 KIF14Q15058 1648 aa20.48■□□□□ 0.87
COL6A6-203ENST00000511332 PLEKHD1A6NEE1 506 aa20.46■□□□□ 0.87
COL6A6-203ENST00000511332 CDK11AQ9UQ88 783 aaPredicted RBP20.46■□□□□ 0.87
COL6A6-203ENST00000511332 TROQ12816 1431 aaPredicted RBP20.43■□□□□ 0.86
COL6A6-203ENST00000511332 TEX14Q8IWB6 1497 aa20.42■□□□□ 0.86
COL6A6-203ENST00000511332 TIAM1Q13009 1591 aa20.42■□□□□ 0.86
COL6A6-203ENST00000511332 TTC37Q6PGP7 1564 aa20.42■□□□□ 0.86
COL6A6-203ENST00000511332 MYO5CQ9NQX4 1742 aa20.41■□□□□ 0.86
COL6A6-203ENST00000511332 KCNH8Q96L42 1107 aa20.41■□□□□ 0.86
COL6A6-203ENST00000511332 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.41■□□□□ 0.86
COL6A6-203ENST00000511332 MAGI3Q5TCQ9 1506 aa20.4■□□□□ 0.86
COL6A6-203ENST00000511332 EHBP1L1Q8N3D4 1523 aa20.39■□□□□ 0.85
COL6A6-203ENST00000511332 CD109Q6YHK3 1445 aa20.38■□□□□ 0.85
COL6A6-203ENST00000511332 CFAP74Q9C0B2 1584 aa20.38■□□□□ 0.85
COL6A6-203ENST00000511332 MAP3K1Q13233 1512 aa20.37■□□□□ 0.85
COL6A6-203ENST00000511332 KDM6BO15054 1643 aa20.34■□□□□ 0.85
COL6A6-203ENST00000511332 SUPT6HQ7KZ85 1726 aaKnown RBP20.33■□□□□ 0.84
COL6A6-203ENST00000511332 MTUS2Q5JR59 1369 aa20.33■□□□□ 0.84
COL6A6-203ENST00000511332 PREX2Q70Z35 1606 aa20.32■□□□□ 0.84
COL6A6-203ENST00000511332 ARAP3Q8WWN8 1544 aa20.32■□□□□ 0.84
COL6A6-203ENST00000511332 CDC42BPAQ5VT25 1732 aa20.31■□□□□ 0.84
COL6A6-203ENST00000511332 ITSN2Q9NZM3 1697 aa20.29■□□□□ 0.84
COL6A6-203ENST00000511332 CDC42BPBQ9Y5S2 1711 aa20.27■□□□□ 0.84
COL6A6-203ENST00000511332 NEO1Q92859 1461 aa20.27■□□□□ 0.84
COL6A6-203ENST00000511332 LRRC9Q6ZRR7 1453 aa20.26■□□□□ 0.83
COL6A6-203ENST00000511332 FANCAO15360 1455 aa20.24■□□□□ 0.83
COL6A6-203ENST00000511332 PLCH2O75038 1416 aa20.24■□□□□ 0.83
COL6A6-203ENST00000511332 PHLDB1Q86UU1 1377 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms