RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 CYB5RLQ6IPT4 315 aa20.43■□□□□ 0.86
HMGB2-205ENST00000511316 JPH4Q96JJ6 628 aa20.42■□□□□ 0.86
HMGB2-205ENST00000511316 ERCC6L2Q5T890 1561 aa20.41■□□□□ 0.86
HMGB2-205ENST00000511316 SHROOM2Q13796 1616 aa20.4■□□□□ 0.86
HMGB2-205ENST00000511316 PRXQ9BXM0 1461 aa20.39■□□□□ 0.85
HMGB2-205ENST00000511316 KIAA0586Q9BVV6 1533 aa20.39■□□□□ 0.85
HMGB2-205ENST00000511316 RAPGEF2Q9Y4G8 1499 aa20.38■□□□□ 0.85
HMGB2-205ENST00000511316 CSRNP3Q8WYN3 585 aa20.37■□□□□ 0.85
HMGB2-205ENST00000511316 TRIM26Q12899 539 aaPredicted RBP20.33■□□□□ 0.85
HMGB2-205ENST00000511316 PRG4Q92954 1404 aaPredicted RBP20.32■□□□□ 0.84
HMGB2-205ENST00000511316 EEA1Q15075 1411 aa20.28■□□□□ 0.84
HMGB2-205ENST00000511316 ZEB1P37275 1124 aaPredicted RBP20.28■□□□□ 0.84
HMGB2-205ENST00000511316 FAM9AQ8IZU1 332 aaPredicted RBP20.27■□□□□ 0.84
HMGB2-205ENST00000511316 IQGAP2Q13576 1575 aa20.2■□□□□ 0.82
HMGB2-205ENST00000511316 DISP1Q96F81 1524 aa20.17■□□□□ 0.82
HMGB2-205ENST00000511316 UGGT2Q9NYU1 1516 aa20.15■□□□□ 0.82
HMGB2-205ENST00000511316 LOC105371045A0A1W2PR82 267 aa20.11■□□□□ 0.81
HMGB2-205ENST00000511316 CARMIL2Q6F5E8 1435 aa20.08■□□□□ 0.81
HMGB2-205ENST00000511316 TNIKQ9UKE5 1360 aa20.08■□□□□ 0.81
HMGB2-205ENST00000511316 PTPRGP23470 1445 aa20.08■□□□□ 0.8
HMGB2-205ENST00000511316 CTTNBP2Q8WZ74 1663 aa20.08■□□□□ 0.8
HMGB2-205ENST00000511316 KIF21BO75037 1637 aa20.07■□□□□ 0.8
HMGB2-205ENST00000511316 KIAA0556O60303 1618 aa20.02■□□□□ 0.8
HMGB2-205ENST00000511316 ADCY10Q96PN6 1610 aa20■□□□□ 0.79
HMGB2-205ENST00000511316 TTBK1Q5TCY1 1321 aaPredicted RBP19.99■□□□□ 0.79
HMGB2-205ENST00000511316 EHMT2Q96KQ7 1210 aa19.99■□□□□ 0.79
HMGB2-205ENST00000511316 GOLGA3Q08378 1498 aa19.96■□□□□ 0.79
HMGB2-205ENST00000511316 P3H3Q8IVL6 736 aa19.95■□□□□ 0.78
HMGB2-205ENST00000511316 UACAQ9BZF9 1416 aa19.95■□□□□ 0.78
HMGB2-205ENST00000511316 PPARGC1BQ86YN6 1023 aaKnown RBP19.95■□□□□ 0.78
HMGB2-205ENST00000511316 UHRF1BP1LA0JNW5 1464 aa19.93■□□□□ 0.78
HMGB2-205ENST00000511316 UBTFP17480 764 aaKnown RBP19.92■□□□□ 0.78
HMGB2-205ENST00000511316 SAMD9Q5K651 1589 aa19.92■□□□□ 0.78
HMGB2-205ENST00000511316 TRHP20396 242 aaPredicted RBP19.91■□□□□ 0.78
HMGB2-205ENST00000511316 PLB1Q6P1J6 1458 aa19.9■□□□□ 0.78
HMGB2-205ENST00000511316 RANGAP1P46060 587 aaPredicted RBP19.9■□□□□ 0.78
HMGB2-205ENST00000511316 ABCC2Q92887 1545 aa19.88■□□□□ 0.77
HMGB2-205ENST00000511316 NPM1P06748 294 aaKnown RBP eCLIP19.86■□□□□ 0.777e-7■■□□□ 14.1
HMGB2-205ENST00000511316 KDM5BQ9UGL1 1544 aa19.86■□□□□ 0.77
HMGB2-205ENST00000511316 MAPKBP1O60336 1514 aa19.85■□□□□ 0.77
HMGB2-205ENST00000511316 ABCA8O94911 1581 aa19.85■□□□□ 0.77
HMGB2-205ENST00000511316 FHOD3Q2V2M9 1422 aa19.83■□□□□ 0.76
HMGB2-205ENST00000511316 PELP1Q8IZL8 1130 aaKnown RBP19.81■□□□□ 0.76
HMGB2-205ENST00000511316 ARHGAP35Q9NRY4 1499 aa19.8■□□□□ 0.76
HMGB2-205ENST00000511316 ABCC10Q5T3U5 1492 aa19.8■□□□□ 0.76
HMGB2-205ENST00000511316 EFCAB5A4FU69 1503 aa19.78■□□□□ 0.76
HMGB2-205ENST00000511316 ASXL2Q76L83 1435 aa19.77■□□□□ 0.76
HMGB2-205ENST00000511316 FAM69CQ0P6D2 419 aa19.75■□□□□ 0.75
HMGB2-205ENST00000511316 KIF13AQ9H1H9 1805 aa19.74■□□□□ 0.75
HMGB2-205ENST00000511316 ATP10BO94823 1461 aa19.74■□□□□ 0.75
HMGB2-205ENST00000511316 ZCCHC11Q5TAX3 1644 aaKnown RBP19.73■□□□□ 0.75
HMGB2-205ENST00000511316 DIP2BQ9P265 1576 aa19.72■□□□□ 0.75
HMGB2-205ENST00000511316 NUP153P49790 1475 aaKnown RBP19.71■□□□□ 0.75
HMGB2-205ENST00000511316 ARID3CA6NKF2 412 aa19.69■□□□□ 0.74
HMGB2-205ENST00000511316 RAPGEF6Q8TEU7 1601 aa19.68■□□□□ 0.74
HMGB2-205ENST00000511316 EPRSP07814 1512 aaKnown RBP19.66■□□□□ 0.74
HMGB2-205ENST00000511316 WDR7Q9Y4E6 1490 aa19.64■□□□□ 0.73
HMGB2-205ENST00000511316 GLI2P10070 1586 aa19.63■□□□□ 0.73
HMGB2-205ENST00000511316 CLIP1P30622 1438 aa19.63■□□□□ 0.73
HMGB2-205ENST00000511316 FMN1Q68DA7 1419 aa19.62■□□□□ 0.73
HMGB2-205ENST00000511316 KCNH8Q96L42 1107 aa19.59■□□□□ 0.73
HMGB2-205ENST00000511316 CEP162Q5TB80 1403 aa19.56■□□□□ 0.72
HMGB2-205ENST00000511316 PPRC1Q5VV67 1664 aaKnown RBP19.53■□□□□ 0.72
HMGB2-205ENST00000511316 CDK13Q14004 1512 aaKnown RBP19.53■□□□□ 0.72
HMGB2-205ENST00000511316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.53■□□□□ 0.72
HMGB2-205ENST00000511316 HNRNPUL2Q1KMD3 747 aaKnown RBP19.53■□□□□ 0.72
HMGB2-205ENST00000511316 MAP3K4Q9Y6R4 1608 aa19.53■□□□□ 0.72
HMGB2-205ENST00000511316 CASKIN1Q8WXD9 1431 aa19.52■□□□□ 0.71
HMGB2-205ENST00000511316 PLEKHD1A6NEE1 506 aa19.51■□□□□ 0.71
HMGB2-205ENST00000511316 TSPOAP1O95153 1857 aa19.5■□□□□ 0.71
HMGB2-205ENST00000511316 ATP1B4Q9UN42 357 aaPredicted RBP19.49■□□□□ 0.71
HMGB2-205ENST00000511316 CD109Q6YHK3 1445 aa19.48■□□□□ 0.71
HMGB2-205ENST00000511316 LRRIQ1Q96JM4 1722 aa19.48■□□□□ 0.71
HMGB2-205ENST00000511316 COL17A1Q9UMD9 1497 aaPredicted RBP19.48■□□□□ 0.71
HMGB2-205ENST00000511316 PCF11O94913 1555 aaKnown RBP19.46■□□□□ 0.71
HMGB2-205ENST00000511316 HECW1Q76N89 1606 aa19.46■□□□□ 0.71
HMGB2-205ENST00000511316 MAGI3Q5TCQ9 1506 aa19.45■□□□□ 0.7
HMGB2-205ENST00000511316 ABCA9Q8IUA7 1624 aa19.44■□□□□ 0.7
HMGB2-205ENST00000511316 FYCO1Q9BQS8 1478 aa19.42■□□□□ 0.7
HMGB2-205ENST00000511316 CFAP43Q8NDM7 1665 aa19.42■□□□□ 0.7
HMGB2-205ENST00000511316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.4■□□□□ 0.76e-13■■■□□ 15.1
HMGB2-205ENST00000511316 TROQ12816 1431 aaPredicted RBP19.38■□□□□ 0.69
HMGB2-205ENST00000511316 CDK11AQ9UQ88 783 aaPredicted RBP19.37■□□□□ 0.69
HMGB2-205ENST00000511316 TEX14Q8IWB6 1497 aa19.37■□□□□ 0.69
HMGB2-205ENST00000511316 CCDC18Q5T9S5 1454 aa19.36■□□□□ 0.69
HMGB2-205ENST00000511316 TTC37Q6PGP7 1564 aa19.34■□□□□ 0.69
HMGB2-205ENST00000511316 KDM6BO15054 1643 aa19.33■□□□□ 0.68
HMGB2-205ENST00000511316 VPS8Q8N3P4 1428 aa19.32■□□□□ 0.68
HMGB2-205ENST00000511316 KIF14Q15058 1648 aa19.32■□□□□ 0.68
HMGB2-205ENST00000511316 CCER1Q8TC90 406 aaPredicted RBP19.31■□□□□ 0.68
HMGB2-205ENST00000511316 PLCH2O75038 1416 aa19.3■□□□□ 0.68
HMGB2-205ENST00000511316 ARAP3Q8WWN8 1544 aa19.29■□□□□ 0.68
HMGB2-205ENST00000511316 PHLDB1Q86UU1 1377 aa19.28■□□□□ 0.68
HMGB2-205ENST00000511316 NEO1Q92859 1461 aa19.28■□□□□ 0.68
HMGB2-205ENST00000511316 RAPGEF3O95398 923 aa19.25■□□□□ 0.67
HMGB2-205ENST00000511316 FANCAO15360 1455 aa19.24■□□□□ 0.67
HMGB2-205ENST00000511316 AKNAQ7Z591 1439 aa19.23■□□□□ 0.67
HMGB2-205ENST00000511316 CENPBP07199 599 aaPredicted RBP19.23■□□□□ 0.67
HMGB2-205ENST00000511316 KANK4Q5T7N3 995 aaPredicted RBP19.21■□□□□ 0.67
HMGB2-205ENST00000511316 SCAF1Q9H7N4 1312 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms