RNA–Protein interactions for RNA: ENST00000510871.5

RBM47-207, Transcript of RNA binding motif protein 47, humanhuman

TSL 1 (best)

Gene RBM47, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-207ENST00000510871 FKBP8Q14318 412 aa18.55■□□□□ 0.56
RBM47-207ENST00000510871 KANK4Q5T7N3 995 aaPredicted RBP18.55■□□□□ 0.56
RBM47-207ENST00000510871 RUSC2Q8N2Y8 1516 aa18.54■□□□□ 0.56
RBM47-207ENST00000510871 ANP32EQ9BTT0 268 aa18.54■□□□□ 0.56
RBM47-207ENST00000510871 EIF5BO60841 1220 aaKnown RBP18.53■□□□□ 0.56
RBM47-207ENST00000510871 GLIPR1L2Q4G1C9 344 aa18.53■□□□□ 0.56
RBM47-207ENST00000510871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.53■□□□□ 0.56
RBM47-207ENST00000510871 FAM9BQ8IZU0 186 aa18.51■□□□□ 0.55
RBM47-207ENST00000510871 PLEKHD1A6NEE1 506 aa18.5■□□□□ 0.55
RBM47-207ENST00000510871 SIN3AQ96ST3 1273 aa18.49■□□□□ 0.55
RBM47-207ENST00000510871 RAPGEF2Q9Y4G8 1499 aa18.49■□□□□ 0.55
RBM47-207ENST00000510871 EIF4G2P78344 907 aaKnown RBP eCLIP18.48■□□□□ 0.55
RBM47-207ENST00000510871 CADPSQ9ULU8 1353 aa18.47■□□□□ 0.55
RBM47-207ENST00000510871 KDM2AQ9Y2K7 1162 aa18.47■□□□□ 0.55
RBM47-207ENST00000510871 CFDP1Q9UEE9 299 aaPredicted RBP18.45■□□□□ 0.54
RBM47-207ENST00000510871 EIF4G1Q04637 1599 aaKnown RBP18.45■□□□□ 0.54
RBM47-207ENST00000510871 NPM1P06748 294 aaKnown RBP eCLIP18.43■□□□□ 0.54
RBM47-207ENST00000510871 ERCC6Q03468 1493 aa18.42■□□□□ 0.54
RBM47-207ENST00000510871 CHGAP10645 457 aaKnown RBP18.41■□□□□ 0.54
RBM47-207ENST00000510871 MRS2Q9HD23 443 aa18.4■□□□□ 0.54
RBM47-207ENST00000510871 PDS5BQ9NTI5 1447 aa18.39■□□□□ 0.54
RBM47-207ENST00000510871 TDRD9Q8NDG6 1382 aaKnown RBP18.39■□□□□ 0.53
RBM47-207ENST00000510871 KCNH8Q96L42 1107 aa18.38■□□□□ 0.53
RBM47-207ENST00000510871 SETD5Q9C0A6 1442 aa18.37■□□□□ 0.53
RBM47-207ENST00000510871 ARHGAP35Q9NRY4 1499 aa18.37■□□□□ 0.53
RBM47-207ENST00000510871 TMC1Q8TDI8 760 aa18.37■□□□□ 0.53
RBM47-207ENST00000510871 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.52
RBM47-207ENST00000510871 FMN1Q68DA7 1419 aa18.3■□□□□ 0.52
RBM47-207ENST00000510871 SALL2Q9Y467 1007 aaPredicted RBP18.3■□□□□ 0.52
RBM47-207ENST00000510871 RAB3GAP2Q9H2M9 1393 aa18.29■□□□□ 0.52
RBM47-207ENST00000510871 TIMELESSQ9UNS1 1208 aa18.29■□□□□ 0.52
RBM47-207ENST00000510871 FHOD3Q2V2M9 1422 aa18.26■□□□□ 0.51
RBM47-207ENST00000510871 PRKCSHP14314 528 aaPredicted RBP18.26■□□□□ 0.51
RBM47-207ENST00000510871 RGL3Q3MIN7 710 aa18.25■□□□□ 0.51
RBM47-207ENST00000510871 ANP32AP39687 249 aaKnown RBP18.25■□□□□ 0.51
RBM47-207ENST00000510871 FANCD2Q9BXW9 1451 aa18.24■□□□□ 0.51
RBM47-207ENST00000510871 NEFMP07197 916 aa18.23■□□□□ 0.51
RBM47-207ENST00000510871 SLC24A1O60721 1099 aa18.23■□□□□ 0.51
RBM47-207ENST00000510871 STAG3Q9UJ98 1225 aa18.22■□□□□ 0.51
RBM47-207ENST00000510871 NCAPD3P42695 1498 aa18.21■□□□□ 0.51
RBM47-207ENST00000510871 IRX6P78412 446 aaPredicted RBP18.21■□□□□ 0.51
RBM47-207ENST00000510871 ESF1Q9H501 851 aaKnown RBP18.2■□□□□ 0.5
RBM47-207ENST00000510871 CARD11Q9BXL7 1154 aa18.19■□□□□ 0.5
RBM47-207ENST00000510871 SUPT16HQ9Y5B9 1047 aaKnown RBP18.18■□□□□ 0.5
RBM47-207ENST00000510871 WDR43Q15061 677 aaKnown RBP eCLIP18.16■□□□□ 0.5
RBM47-207ENST00000510871 IGF1RP08069 1367 aa18.16■□□□□ 0.5
RBM47-207ENST00000510871 CCDC136Q96JN2 1154 aa18.15■□□□□ 0.5
RBM47-207ENST00000510871 FGD5Q6ZNL6 1462 aa18.15■□□□□ 0.5
RBM47-207ENST00000510871 NPM2Q86SE8 214 aaKnown RBP18.13■□□□□ 0.49
RBM47-207ENST00000510871 SYNJ1O43426 1573 aa18.12■□□□□ 0.49
RBM47-207ENST00000510871 DHX57Q6P158 1386 aaKnown RBP18.12■□□□□ 0.49
RBM47-207ENST00000510871 ZBTB47Q9UFB7 747 aaPredicted RBP18.12■□□□□ 0.49
RBM47-207ENST00000510871 CARMIL2Q6F5E8 1435 aa18.12■□□□□ 0.49
RBM47-207ENST00000510871 NBR1Q14596 966 aa18.1■□□□□ 0.49
RBM47-207ENST00000510871 FOXD1Q16676 465 aa18.1■□□□□ 0.49
RBM47-207ENST00000510871 KIF21BO75037 1637 aa18.09■□□□□ 0.49
RBM47-207ENST00000510871 HSPA5P11021 654 aaKnown RBP18.07■□□□□ 0.48
RBM47-207ENST00000510871 MPHOSPH9Q99550 1183 aa18.07■□□□□ 0.48
RBM47-207ENST00000510871 PPP1R15AO75807 674 aaPredicted RBP18.07■□□□□ 0.48
RBM47-207ENST00000510871 RAD54L2Q9Y4B4 1467 aa18.05■□□□□ 0.48
RBM47-207ENST00000510871 SENP3-EIF4A1A0A087X0R7 540 aa18.05■□□□□ 0.48
RBM47-207ENST00000510871 CCER2I3L3R5 266 aa18.04■□□□□ 0.48
RBM47-207ENST00000510871 DCAF11Q8TEB1 546 aa18.04■□□□□ 0.48
RBM47-207ENST00000510871 PKD2Q13563 968 aa18.04■□□□□ 0.48
RBM47-207ENST00000510871 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.03■□□□□ 0.48
RBM47-207ENST00000510871 CFTRP13569 1480 aa18.02■□□□□ 0.48
RBM47-207ENST00000510871 CDCA8Q53HL2 280 aa18■□□□□ 0.47
RBM47-207ENST00000510871 PLPPR3Q6T4P5 718 aa18■□□□□ 0.47
RBM47-207ENST00000510871 SENP3Q9H4L4 574 aaPredicted RBP17.99■□□□□ 0.47
RBM47-207ENST00000510871 KNSTRNQ9Y448 316 aa17.99■□□□□ 0.47
RBM47-207ENST00000510871 CCDC18Q5T9S5 1454 aa17.98■□□□□ 0.47
RBM47-207ENST00000510871 ERICH3Q5RHP9 1530 aa17.98■□□□□ 0.47
RBM47-207ENST00000510871 GAPVD1Q14C86 1478 aa17.98■□□□□ 0.47
RBM47-207ENST00000510871 ANKRD30AQ9BXX3 1397 aa17.96■□□□□ 0.47
RBM47-207ENST00000510871 TOP2BQ02880 1626 aa17.95■□□□□ 0.46
RBM47-207ENST00000510871 TSHZ2Q9NRE2 1034 aa17.95■□□□□ 0.46
RBM47-207ENST00000510871 JPH4Q96JJ6 628 aa17.94■□□□□ 0.46
RBM47-207ENST00000510871 NUP155O75694 1391 aa17.94■□□□□ 0.46
RBM47-207ENST00000510871 HMGXB3Q12766 1538 aa17.94■□□□□ 0.46
RBM47-207ENST00000510871 BICRAQ9NZM4 1560 aa17.94■□□□□ 0.46
RBM47-207ENST00000510871 L3MBTL2Q969R5 705 aa17.93■□□□□ 0.46
RBM47-207ENST00000510871 ARAP1Q96P48 1450 aa17.93■□□□□ 0.46
RBM47-207ENST00000510871 PRXQ9BXM0 1461 aa17.91■□□□□ 0.46
RBM47-207ENST00000510871 CUX1P39880 1505 aa17.9■□□□□ 0.46
RBM47-207ENST00000510871 CC2D1BQ5T0F9 858 aaKnown RBP17.89■□□□□ 0.46
RBM47-207ENST00000510871 PHLDB1Q86UU1 1377 aa17.89■□□□□ 0.45
RBM47-207ENST00000510871 RBM19Q9Y4C8 960 aaKnown RBP17.88■□□□□ 0.45
RBM47-207ENST00000510871 LRRC9Q6ZRR7 1453 aa17.88■□□□□ 0.45
RBM47-207ENST00000510871 TMF1P82094 1093 aa17.88■□□□□ 0.45
RBM47-207ENST00000510871 HNRNPMP52272 730 aaKnown RBP eCLIP17.88■□□□□ 0.45
RBM47-207ENST00000510871 KANK1Q14678 1352 aa17.87■□□□□ 0.45
RBM47-207ENST00000510871 PPP4R2Q9NY27 417 aa17.86■□□□□ 0.45
RBM47-207ENST00000510871 EFCAB2Q5VUJ9 269 aa17.84■□□□□ 0.45
RBM47-207ENST00000510871 UPF2Q9HAU5 1272 aaKnown RBP17.84■□□□□ 0.45
RBM47-207ENST00000510871 FGD6Q6ZV73 1430 aa17.84■□□□□ 0.45
RBM47-207ENST00000510871 CFAP53Q96M91 514 aa17.82■□□□□ 0.44
RBM47-207ENST00000510871 CASKIN1Q8WXD9 1431 aa17.82■□□□□ 0.44
RBM47-207ENST00000510871 NESP48681 1621 aa17.82■□□□□ 0.44
RBM47-207ENST00000510871 AQRO60306 1485 aaKnown RBP eCLIP17.81■□□□□ 0.44
RBM47-207ENST00000510871 ROCK2O75116 1388 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms