RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 MIER1Q8N108 512 aa10.9□□□□□ -0.66
HTT-208ENST00000510626 RSPH6AQ9H0K4 717 aa10.89□□□□□ -0.67
HTT-208ENST00000510626 NAP1L5Q96NT1 182 aaPredicted RBP10.89□□□□□ -0.67
HTT-208ENST00000510626 BCL11AQ9H165 835 aa10.89□□□□□ -0.67
HTT-208ENST00000510626 EIF4G2P78344 907 aaKnown RBP eCLIP10.88□□□□□ -0.671e-7■■■■■ 32.2
HTT-208ENST00000510626 LAS1LQ9Y4W2 734 aaKnown RBP10.88□□□□□ -0.67
HTT-208ENST00000510626 ZRSR1Q15695 479 aaKnown RBP10.88□□□□□ -0.67
HTT-208ENST00000510626 FAM9BQ8IZU0 186 aa10.88□□□□□ -0.67
HTT-208ENST00000510626 MTERF4Q7Z6M4 381 aaKnown RBP10.86□□□□□ -0.67
HTT-208ENST00000510626 RSF1Q96T23 1441 aaPredicted RBP10.85□□□□□ -0.67
HTT-208ENST00000510626 CCER2I3L3R5 266 aa10.84□□□□□ -0.67
HTT-208ENST00000510626 CLIP1P30622 1438 aa10.82□□□□□ -0.68
HTT-208ENST00000510626 DNTTIP2Q5QJE6 756 aaKnown RBP10.82□□□□□ -0.68
HTT-208ENST00000510626 MSNP26038 577 aaKnown RBP10.81□□□□□ -0.68
HTT-208ENST00000510626 DEKP35659 375 aaKnown RBP10.8□□□□□ -0.68
HTT-208ENST00000510626 ZCCHC6Q5VYS8 1495 aaKnown RBP10.79□□□□□ -0.68
HTT-208ENST00000510626 SUPT16HQ9Y5B9 1047 aaKnown RBP10.78□□□□□ -0.68
HTT-208ENST00000510626 GOLGA3Q08378 1498 aa10.78□□□□□ -0.68
HTT-208ENST00000510626 CFAP53Q96M91 514 aa10.76□□□□□ -0.69
HTT-208ENST00000510626 HSCBQ8IWL3 235 aa10.75□□□□□ -0.69
HTT-208ENST00000510626 PNNQ9H307 717 aaKnown RBP10.75□□□□□ -0.69
HTT-208ENST00000510626 GBP4Q96PP9 640 aa10.75□□□□□ -0.69
HTT-208ENST00000510626 TNIKQ9UKE5 1360 aa10.75□□□□□ -0.69
HTT-208ENST00000510626 CALRP27797 417 aaKnown RBP10.74□□□□□ -0.69
HTT-208ENST00000510626 FTSJ3Q8IY81 847 aaKnown RBP10.73□□□□□ -0.69
HTT-208ENST00000510626 TCERG1O14776 1098 aaKnown RBP10.73□□□□□ -0.69
HTT-208ENST00000510626 SYAP1Q96A49 352 aaPredicted RBP10.73□□□□□ -0.69
HTT-208ENST00000510626 MTUS2Q5JR59 1369 aa10.72□□□□□ -0.69
HTT-208ENST00000510626 HAP1P54257 671 aaPredicted RBP10.72□□□□□ -0.69
HTT-208ENST00000510626 KIAA2012Q0VF49 1180 aa10.71□□□□□ -0.69
HTT-208ENST00000510626 KNSTRNQ9Y448 316 aa10.71□□□□□ -0.69
HTT-208ENST00000510626 MAP7D2Q96T17 732 aa10.71□□□□□ -0.7
HTT-208ENST00000510626 GOLGA6L3A6NEY3 463 aa10.7□□□□□ -0.7
HTT-208ENST00000510626 TSPY4P0CV99 314 aa10.7□□□□□ -0.7
HTT-208ENST00000510626 TSPY10P0CW01 314 aa10.7□□□□□ -0.7
HTT-208ENST00000510626 ARXQ96QS3 562 aa10.7□□□□□ -0.7
HTT-208ENST00000510626 MCCP23508 829 aa10.69□□□□□ -0.7
HTT-208ENST00000510626 PHF14O94880 888 aa10.69□□□□□ -0.7
HTT-208ENST00000510626 RBM19Q9Y4C8 960 aaKnown RBP10.69□□□□□ -0.7
HTT-208ENST00000510626 CEP162Q5TB80 1403 aa10.68□□□□□ -0.7
HTT-208ENST00000510626 HSP90AB1P08238 724 aaKnown RBP10.68□□□□□ -0.7
HTT-208ENST00000510626 A0A0U1RQG5 324 aaPredicted RBP10.68□□□□□ -0.7
HTT-208ENST00000510626 TAF3Q5VWG9 929 aa10.68□□□□□ -0.7
HTT-208ENST00000510626 CEP164Q9UPV0 1460 aa10.67□□□□□ -0.7
HTT-208ENST00000510626 NUDCQ9Y266 331 aa10.66□□□□□ -0.7
HTT-208ENST00000510626 ESF1Q9H501 851 aaKnown RBP10.66□□□□□ -0.7
HTT-208ENST00000510626 PHLDB1Q86UU1 1377 aa10.65□□□□□ -0.7
HTT-208ENST00000510626 HTATSF1O43719 755 aaKnown RBP10.65□□□□□ -0.7
HTT-208ENST00000510626 CSPP1Q1MSJ5 1256 aa10.64□□□□□ -0.71
HTT-208ENST00000510626 ZNF777Q9ULD5 760 aaPredicted RBP10.64□□□□□ -0.71
HTT-208ENST00000510626 FANCIQ9NVI1 1328 aa10.64□□□□□ -0.71
HTT-208ENST00000510626 HSP90AA2PQ14568 343 aaPredicted RBP10.63□□□□□ -0.71
HTT-208ENST00000510626 CHMP4AQ9BY43 222 aa10.63□□□□□ -0.71
HTT-208ENST00000510626 FHAD1B1AJZ9 1412 aa10.63□□□□□ -0.71
HTT-208ENST00000510626 TNNT3P45378 269 aaPredicted RBP10.63□□□□□ -0.71
HTT-208ENST00000510626 IPO9Q96P70 1041 aaKnown RBP10.63□□□□□ -0.71
HTT-208ENST00000510626 STAG3Q9UJ98 1225 aa10.62□□□□□ -0.71
HTT-208ENST00000510626 PDE3BQ13370 1112 aa10.62□□□□□ -0.71
HTT-208ENST00000510626 GOLGA6L4A6NEF3 574 aa10.62□□□□□ -0.71
HTT-208ENST00000510626 DDX11L8A8MPP1 907 aa10.62□□□□□ -0.71
HTT-208ENST00000510626 RALBP1Q15311 655 aa10.61□□□□□ -0.71
HTT-208ENST00000510626 ISY1Q9ULR0 285 aaKnown RBP10.61□□□□□ -0.71
HTT-208ENST00000510626 SKOR2Q2VWA4 1001 aaPredicted RBP10.61□□□□□ -0.71
HTT-208ENST00000510626 IPO8O15397 1037 aaKnown RBP10.61□□□□□ -0.71
HTT-208ENST00000510626 AAMPQ13685 434 aa10.61□□□□□ -0.71
HTT-208ENST00000510626 CCDC34Q96HJ3 373 aa10.6□□□□□ -0.71
HTT-208ENST00000510626 ROCK2O75116 1388 aaKnown RBP10.59□□□□□ -0.71
HTT-208ENST00000510626 GOLGA6L1Q8N7Z2 621 aa10.59□□□□□ -0.71
HTT-208ENST00000510626 IRX6P78412 446 aaPredicted RBP10.59□□□□□ -0.71
HTT-208ENST00000510626 CALD1Q05682 793 aaKnown RBP10.58□□□□□ -0.72
HTT-208ENST00000510626 TPM4P67936 248 aa10.57□□□□□ -0.72
HTT-208ENST00000510626 CCNB3Q8WWL7 1395 aa10.57□□□□□ -0.72
HTT-208ENST00000510626 KIF27Q86VH2 1401 aa10.56□□□□□ -0.72
HTT-208ENST00000510626 NGEFQ8N5V2 710 aa10.56□□□□□ -0.72
HTT-208ENST00000510626 P3H3Q8IVL6 736 aa10.56□□□□□ -0.72
HTT-208ENST00000510626 SETQ01105 290 aaPredicted RBP10.56□□□□□ -0.72
HTT-208ENST00000510626 DHX8Q14562 1220 aaKnown RBP10.56□□□□□ -0.72
HTT-208ENST00000510626 SALL2Q9Y467 1007 aaPredicted RBP10.56□□□□□ -0.72
HTT-208ENST00000510626 CHMP4CQ96CF2 233 aa10.55□□□□□ -0.72
HTT-208ENST00000510626 MAPK8IP3Q9UPT6 1336 aa10.55□□□□□ -0.72
HTT-208ENST00000510626 SCRIBQ14160 1630 aa10.55□□□□□ -0.72
HTT-208ENST00000510626 CARD11Q9BXL7 1154 aa10.54□□□□□ -0.72
HTT-208ENST00000510626 RWDD1Q9H446 243 aaPredicted RBP10.54□□□□□ -0.72
HTT-208ENST00000510626 DRC7Q8IY82 874 aa10.54□□□□□ -0.72
HTT-208ENST00000510626 RB1CC1Q8TDY2 1594 aa10.54□□□□□ -0.72
HTT-208ENST00000510626 HDAC5Q9UQL6 1122 aa10.53□□□□□ -0.72
HTT-208ENST00000510626 PMFBP1Q8TBY8 1022 aa10.52□□□□□ -0.72
HTT-208ENST00000510626 KIAA1211Q6ZU35 1233 aa10.52□□□□□ -0.73
HTT-208ENST00000510626 FBLN2P98095 1184 aa10.52□□□□□ -0.73
HTT-208ENST00000510626 RTN4Q9NQC3 1192 aaKnown RBP10.51□□□□□ -0.73
HTT-208ENST00000510626 KTN1Q86UP2 1357 aaKnown RBP10.51□□□□□ -0.73
HTT-208ENST00000510626 RGS3P49796 1198 aa10.51□□□□□ -0.73
HTT-208ENST00000510626 SETD5Q9C0A6 1442 aa10.51□□□□□ -0.73
HTT-208ENST00000510626 FGD1P98174 961 aa10.51□□□□□ -0.73
HTT-208ENST00000510626 TMF1P82094 1093 aa10.5□□□□□ -0.73
HTT-208ENST00000510626 B4GALNT3Q6L9W6 998 aa10.5□□□□□ -0.73
HTT-208ENST00000510626 RCAN3Q9UKA8 241 aa10.5□□□□□ -0.73
HTT-208ENST00000510626 TEX35Q5T0J7 233 aa10.5□□□□□ -0.73
HTT-208ENST00000510626 TSHZ2Q9NRE2 1034 aa10.5□□□□□ -0.73
HTT-208ENST00000510626 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms