RNA–Protein interactions for RNA: ENST00000510474.5

NEK11-208, Transcript of NIMA related kinase 11, humanhuman

TSL 2

Gene NEK11, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-208ENST00000510474 ARHGAP35Q9NRY4 1499 aa13.23□□□□□ -0.29
NEK11-208ENST00000510474 RANGAP1P46060 587 aaPredicted RBP13.21□□□□□ -0.3
NEK11-208ENST00000510474 PPARGC1BQ86YN6 1023 aaKnown RBP13.2□□□□□ -0.3
NEK11-208ENST00000510474 HRCP23327 699 aa13.19□□□□□ -0.3
NEK11-208ENST00000510474 EFCAB5A4FU69 1503 aa13.18□□□□□ -0.3
NEK11-208ENST00000510474 GRIN2BQ13224 1484 aa13.17□□□□□ -0.3
NEK11-208ENST00000510474 ADAMTS12P58397 1594 aa13.17□□□□□ -0.3
NEK11-208ENST00000510474 FHAD1B1AJZ9 1412 aa13.16□□□□□ -0.3
NEK11-208ENST00000510474 AQRO60306 1485 aaKnown RBP eCLIP13.15□□□□□ -0.3
NEK11-208ENST00000510474 BCL11AQ9H165 835 aa13.14□□□□□ -0.31
NEK11-208ENST00000510474 EIF4G3O43432 1585 aaKnown RBP13.14□□□□□ -0.31
NEK11-208ENST00000510474 ZNF608Q9ULD9 1512 aaPredicted RBP13.13□□□□□ -0.31
NEK11-208ENST00000510474 DAXXQ9UER7 740 aaPredicted RBP13.1□□□□□ -0.31
NEK11-208ENST00000510474 MAP3K1Q13233 1512 aa13.09□□□□□ -0.31
NEK11-208ENST00000510474 SAMD9Q5K651 1589 aa13.09□□□□□ -0.31
NEK11-208ENST00000510474 MAGI1Q96QZ7 1491 aaPredicted RBP13.06□□□□□ -0.32
NEK11-208ENST00000510474 SNAPC4Q5SXM2 1469 aa13.06□□□□□ -0.32
NEK11-208ENST00000510474 PCF11O94913 1555 aaKnown RBP13.06□□□□□ -0.32
NEK11-208ENST00000510474 IQGAP2Q13576 1575 aa13.06□□□□□ -0.32
NEK11-208ENST00000510474 TIAM1Q13009 1591 aa13.05□□□□□ -0.32
NEK11-208ENST00000510474 FYCO1Q9BQS8 1478 aa13.05□□□□□ -0.32
NEK11-208ENST00000510474 FHOD3Q2V2M9 1422 aa13.05□□□□□ -0.32
NEK11-208ENST00000510474 CFAP43Q8NDM7 1665 aa13.04□□□□□ -0.32
NEK11-208ENST00000510474 FMN1Q68DA7 1419 aa13.04□□□□□ -0.32
NEK11-208ENST00000510474 CASKIN1Q8WXD9 1431 aa13.02□□□□□ -0.33
NEK11-208ENST00000510474 GRIN2AQ12879 1464 aa13.02□□□□□ -0.33
NEK11-208ENST00000510474 SYNJ2O15056 1496 aa13□□□□□ -0.33
NEK11-208ENST00000510474 ZEB1P37275 1124 aaPredicted RBP13□□□□□ -0.33
NEK11-208ENST00000510474 UGGT2Q9NYU1 1516 aa12.99□□□□□ -0.33
NEK11-208ENST00000510474 KANK4Q5T7N3 995 aaPredicted RBP12.99□□□□□ -0.33
NEK11-208ENST00000510474 AEBP2Q6ZN18 517 aaPredicted RBP12.99□□□□□ -0.33
NEK11-208ENST00000510474 KIAA0586Q9BVV6 1533 aa12.98□□□□□ -0.33
NEK11-208ENST00000510474 P3H3Q8IVL6 736 aa12.98□□□□□ -0.33
NEK11-208ENST00000510474 LRRC9Q6ZRR7 1453 aa12.97□□□□□ -0.33
NEK11-208ENST00000510474 RRBP1Q9P2E9 1410 aaKnown RBP12.96□□□□□ -0.34
NEK11-208ENST00000510474 SCAF1Q9H7N4 1312 aaKnown RBP12.94□□□□□ -0.34
NEK11-208ENST00000510474 CEP170Q5SW79 1584 aa12.93□□□□□ -0.34
NEK11-208ENST00000510474 KIAA0556O60303 1618 aa12.92□□□□□ -0.34
NEK11-208ENST00000510474 CHMP7Q8WUX9 453 aaPredicted RBP12.91□□□□□ -0.34
NEK11-208ENST00000510474 NUP160Q12769 1436 aa12.91□□□□□ -0.34
NEK11-208ENST00000510474 HECW1Q76N89 1606 aa12.9□□□□□ -0.34
NEK11-208ENST00000510474 LRRIQ1Q96JM4 1722 aa12.9□□□□□ -0.34
NEK11-208ENST00000510474 CCDC18Q5T9S5 1454 aa12.9□□□□□ -0.34
NEK11-208ENST00000510474 DISP1Q96F81 1524 aa12.89□□□□□ -0.35
NEK11-208ENST00000510474 CCNB3Q8WWL7 1395 aa12.89□□□□□ -0.35
NEK11-208ENST00000510474 ATP1B4Q9UN42 357 aaPredicted RBP12.88□□□□□ -0.35
NEK11-208ENST00000510474 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.86□□□□□ -0.35
NEK11-208ENST00000510474 CCER1Q8TC90 406 aaPredicted RBP12.86□□□□□ -0.35
NEK11-208ENST00000510474 EHBP1L1Q8N3D4 1523 aa12.86□□□□□ -0.35
NEK11-208ENST00000510474 HNRNPUL2Q1KMD3 747 aaKnown RBP12.85□□□□□ -0.35
NEK11-208ENST00000510474 PHLDB1Q86UU1 1377 aa12.84□□□□□ -0.35
NEK11-208ENST00000510474 MTUS2Q5JR59 1369 aa12.83□□□□□ -0.35
NEK11-208ENST00000510474 FBLN2P98095 1184 aa12.83□□□□□ -0.36
NEK11-208ENST00000510474 SUPT6HQ7KZ85 1726 aaKnown RBP12.82□□□□□ -0.36
NEK11-208ENST00000510474 CARMIL2Q6F5E8 1435 aa12.82□□□□□ -0.36
NEK11-208ENST00000510474 CHD1O14646 1710 aa12.82□□□□□ -0.36
NEK11-208ENST00000510474 EPRSP07814 1512 aaKnown RBP12.82□□□□□ -0.36
NEK11-208ENST00000510474 RAPGEF6Q8TEU7 1601 aa12.81□□□□□ -0.36
NEK11-208ENST00000510474 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.8□□□□□ -0.36
NEK11-208ENST00000510474 ARHGEF11O15085 1522 aa12.78□□□□□ -0.36
NEK11-208ENST00000510474 JPH4Q96JJ6 628 aa12.78□□□□□ -0.36
NEK11-208ENST00000510474 NCOA2Q15596 1464 aa12.78□□□□□ -0.36
NEK11-208ENST00000510474 MAGI3Q5TCQ9 1506 aa12.77□□□□□ -0.36
NEK11-208ENST00000510474 CDK13Q14004 1512 aaKnown RBP12.76□□□□□ -0.37
NEK11-208ENST00000510474 FGD6Q6ZV73 1430 aa12.76□□□□□ -0.37
NEK11-208ENST00000510474 NUP153P49790 1475 aaKnown RBP12.76□□□□□ -0.37
NEK11-208ENST00000510474 MYOM3Q5VTT5 1437 aa12.75□□□□□ -0.37
NEK11-208ENST00000510474 SHROOM2Q13796 1616 aa12.74□□□□□ -0.37
NEK11-208ENST00000510474 ABCA8O94911 1581 aa12.71□□□□□ -0.37
NEK11-208ENST00000510474 PLB1Q6P1J6 1458 aa12.71□□□□□ -0.37
NEK11-208ENST00000510474 FAM50AQ14320 339 aaKnown RBP12.71□□□□□ -0.38
NEK11-208ENST00000510474 CLSPNQ9HAW4 1339 aa12.7□□□□□ -0.38
NEK11-208ENST00000510474 PRG4Q92954 1404 aaPredicted RBP12.7□□□□□ -0.38
NEK11-208ENST00000510474 PTPN23Q9H3S7 1636 aa12.69□□□□□ -0.38
NEK11-208ENST00000510474 CDK11AQ9UQ88 783 aaPredicted RBP12.68□□□□□ -0.38
NEK11-208ENST00000510474 MIA2Q96PC5 1412 aa12.68□□□□□ -0.38
NEK11-208ENST00000510474 TCOF1Q13428 1488 aaKnown RBP12.68□□□□□ -0.38
NEK11-208ENST00000510474 ITGAEP38570 1179 aa12.67□□□□□ -0.38
NEK11-208ENST00000510474 DHX57Q6P158 1386 aaKnown RBP12.67□□□□□ -0.38
NEK11-208ENST00000510474 CLASP1Q7Z460 1538 aa12.67□□□□□ -0.38
NEK11-208ENST00000510474 ADCY10Q96PN6 1610 aa12.67□□□□□ -0.38
NEK11-208ENST00000510474 SETD5Q9C0A6 1442 aa12.66□□□□□ -0.38
NEK11-208ENST00000510474 TROQ12816 1431 aaPredicted RBP12.66□□□□□ -0.38
NEK11-208ENST00000510474 RAB3GAP2Q9H2M9 1393 aa12.66□□□□□ -0.38
NEK11-208ENST00000510474 EIF5BO60841 1220 aaKnown RBP12.64□□□□□ -0.39
NEK11-208ENST00000510474 PTPRGP23470 1445 aa12.64□□□□□ -0.39
NEK11-208ENST00000510474 ITSN2Q9NZM3 1697 aa12.63□□□□□ -0.39
NEK11-208ENST00000510474 ARID3CA6NKF2 412 aa12.63□□□□□ -0.39
NEK11-208ENST00000510474 HFM1A2PYH4 1435 aa12.61□□□□□ -0.39
NEK11-208ENST00000510474 ATP10BO94823 1461 aa12.6□□□□□ -0.39
NEK11-208ENST00000510474 KIF14Q15058 1648 aa12.6□□□□□ -0.39
NEK11-208ENST00000510474 CENPBP07199 599 aaPredicted RBP12.59□□□□□ -0.39
NEK11-208ENST00000510474 AKNAQ7Z591 1439 aa12.59□□□□□ -0.39
NEK11-208ENST00000510474 PTPRKQ15262 1439 aa12.59□□□□□ -0.39
NEK11-208ENST00000510474 UACAQ9BZF9 1416 aa12.59□□□□□ -0.39
NEK11-208ENST00000510474 ERCC6L2Q5T890 1561 aa12.58□□□□□ -0.4
NEK11-208ENST00000510474 GCC2Q8IWJ2 1684 aa12.57□□□□□ -0.4
NEK11-208ENST00000510474 ABCC2Q92887 1545 aa12.57□□□□□ -0.4
NEK11-208ENST00000510474 DNMT1P26358 1616 aaKnown RBP12.56□□□□□ -0.4
NEK11-208ENST00000510474 PLEKHD1A6NEE1 506 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms