RNA–Protein interactions for RNA: ENST00000509914.5

APBB3-214, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 1 (best)

Gene APBB3, Length 2,020 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-214ENST00000509914 CEP170Q5SW79 1584 aa25.55■■□□□ 1.68
APBB3-214ENST00000509914 KIAA0586Q9BVV6 1533 aa25.47■■□□□ 1.67
APBB3-214ENST00000509914 CTTNBP2Q8WZ74 1663 aa25.46■■□□□ 1.67
APBB3-214ENST00000509914 OSCARQ8IYS5 282 aa25.41■■□□□ 1.66
APBB3-214ENST00000509914 IQGAP2Q13576 1575 aa25.4■■□□□ 1.66
APBB3-214ENST00000509914 RANGAP1P46060 587 aaPredicted RBP25.4■■□□□ 1.66
APBB3-214ENST00000509914 CLASP1Q7Z460 1538 aa25.38■■□□□ 1.65
APBB3-214ENST00000509914 CEP162Q5TB80 1403 aa25.37■■□□□ 1.65
APBB3-214ENST00000509914 JPH4Q96JJ6 628 aa25.33■■□□□ 1.65
APBB3-214ENST00000509914 CLIP1P30622 1438 aa25.31■■□□□ 1.64
APBB3-214ENST00000509914 UGGT2Q9NYU1 1516 aa25.3■■□□□ 1.64
APBB3-214ENST00000509914 ARHGAP35Q9NRY4 1499 aa25.26■■□□□ 1.63
APBB3-214ENST00000509914 SHROOM2Q13796 1616 aa25.25■■□□□ 1.63
APBB3-214ENST00000509914 DISP1Q96F81 1524 aa25.23■■□□□ 1.63
APBB3-214ENST00000509914 SAMD9Q5K651 1589 aa25.23■■□□□ 1.63
APBB3-214ENST00000509914 P3H3Q8IVL6 736 aa25.22■■□□□ 1.63
APBB3-214ENST00000509914 PRG4Q92954 1404 aaPredicted RBP25.21■■□□□ 1.63
APBB3-214ENST00000509914 EFCAB5A4FU69 1503 aa25.21■■□□□ 1.63
APBB3-214ENST00000509914 ARAP1Q96P48 1450 aa25.18■■□□□ 1.62
APBB3-214ENST00000509914 KIAA0556O60303 1618 aa25.17■■□□□ 1.62
APBB3-214ENST00000509914 FHOD3Q2V2M9 1422 aa25.15■■□□□ 1.62
APBB3-214ENST00000509914 ERCC6L2Q5T890 1561 aa25.15■■□□□ 1.62
APBB3-214ENST00000509914 CARMIL2Q6F5E8 1435 aa25.14■■□□□ 1.62
APBB3-214ENST00000509914 TTBK1Q5TCY1 1321 aaPredicted RBP25.02■■□□□ 1.6
APBB3-214ENST00000509914 VPS8Q8N3P4 1428 aa25.01■■□□□ 1.59
APBB3-214ENST00000509914 HRCP23327 699 aa24.99■■□□□ 1.59
APBB3-214ENST00000509914 PTPRGP23470 1445 aa24.98■■□□□ 1.59
APBB3-214ENST00000509914 FMN1Q68DA7 1419 aa24.98■■□□□ 1.59
APBB3-214ENST00000509914 ARHGEF11O15085 1522 aa24.98■■□□□ 1.59
APBB3-214ENST00000509914 PLB1Q6P1J6 1458 aa24.91■■□□□ 1.58
APBB3-214ENST00000509914 RIMBP3CA6NJZ7 1639 aa24.9■■□□□ 1.58
APBB3-214ENST00000509914 RIMBP3BA6NNM3 1639 aa24.9■■□□□ 1.58
APBB3-214ENST00000509914 RIMBP3Q9UFD9 1639 aa24.9■■□□□ 1.58
APBB3-214ENST00000509914 CASKIN1Q8WXD9 1431 aa24.89■■□□□ 1.58
APBB3-214ENST00000509914 PCF11O94913 1555 aaKnown RBP24.89■■□□□ 1.58
APBB3-214ENST00000509914 ABCA8O94911 1581 aa24.86■■□□□ 1.57
APBB3-214ENST00000509914 FYCO1Q9BQS8 1478 aa24.85■■□□□ 1.57
APBB3-214ENST00000509914 UACAQ9BZF9 1416 aa24.84■■□□□ 1.57
APBB3-214ENST00000509914 RAPGEF6Q8TEU7 1601 aa24.83■■□□□ 1.57
APBB3-214ENST00000509914 ATP1B4Q9UN42 357 aaPredicted RBP24.83■■□□□ 1.57
APBB3-214ENST00000509914 NUP153P49790 1475 aaKnown RBP24.8■■□□□ 1.56
APBB3-214ENST00000509914 DNAJC5Q9H3Z4 198 aa24.78■■□□□ 1.56
APBB3-214ENST00000509914 HECW1Q76N89 1606 aa24.77■■□□□ 1.56
APBB3-214ENST00000509914 CYB5RLQ6IPT4 315 aa24.76■■□□□ 1.55
APBB3-214ENST00000509914 ABCC2Q92887 1545 aa24.76■■□□□ 1.55
APBB3-214ENST00000509914 UHRF1BP1LA0JNW5 1464 aa24.76■■□□□ 1.55
APBB3-214ENST00000509914 ARID3CA6NKF2 412 aa24.75■■□□□ 1.55
APBB3-214ENST00000509914 EPRSP07814 1512 aaKnown RBP24.73■■□□□ 1.55
APBB3-214ENST00000509914 LRRIQ1Q96JM4 1722 aa24.73■■□□□ 1.55
APBB3-214ENST00000509914 ADCY10Q96PN6 1610 aa24.72■■□□□ 1.55
APBB3-214ENST00000509914 CDK13Q14004 1512 aaKnown RBP24.7■■□□□ 1.54
APBB3-214ENST00000509914 ATP10BO94823 1461 aa24.7■■□□□ 1.54
APBB3-214ENST00000509914 CCDC18Q5T9S5 1454 aa24.68■■□□□ 1.54
APBB3-214ENST00000509914 APLP2Q06481 763 aa24.68■■□□□ 1.54
APBB3-214ENST00000509914 MAP3K1Q13233 1512 aa24.67■■□□□ 1.54
APBB3-214ENST00000509914 TIAM1Q13009 1591 aa24.67■■□□□ 1.54
APBB3-214ENST00000509914 KDM5BQ9UGL1 1544 aa24.65■■□□□ 1.54
APBB3-214ENST00000509914 KANK4Q5T7N3 995 aaPredicted RBP24.64■■□□□ 1.53
APBB3-214ENST00000509914 CFAP43Q8NDM7 1665 aa24.63■■□□□ 1.53
APBB3-214ENST00000509914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.62■■□□□ 1.53
APBB3-214ENST00000509914 HNRNPUL2Q1KMD3 747 aaKnown RBP24.62■■□□□ 1.53
APBB3-214ENST00000509914 PPARGC1BQ86YN6 1023 aaKnown RBP24.62■■□□□ 1.53
APBB3-214ENST00000509914 ZCCHC11Q5TAX3 1644 aaKnown RBP24.59■■□□□ 1.53
APBB3-214ENST00000509914 MAGI3Q5TCQ9 1506 aa24.58■■□□□ 1.53
APBB3-214ENST00000509914 LRRC9Q6ZRR7 1453 aa24.58■■□□□ 1.53
APBB3-214ENST00000509914 PCGF6Q9BYE7 350 aa24.57■■□□□ 1.52
APBB3-214ENST00000509914 NPM1P06748 294 aaKnown RBP eCLIP24.53■■□□□ 1.52
APBB3-214ENST00000509914 CDK11AQ9UQ88 783 aaPredicted RBP24.53■■□□□ 1.52
APBB3-214ENST00000509914 MTUS2Q5JR59 1369 aa24.53■■□□□ 1.52
APBB3-214ENST00000509914 PLEKHD1A6NEE1 506 aa24.51■■□□□ 1.51
APBB3-214ENST00000509914 TROQ12816 1431 aaPredicted RBP24.49■■□□□ 1.51
APBB3-214ENST00000509914 EHBP1L1Q8N3D4 1523 aa24.48■■□□□ 1.51
APBB3-214ENST00000509914 ASXL2Q76L83 1435 aa24.46■■□□□ 1.51
APBB3-214ENST00000509914 TRIM26Q12899 539 aaPredicted RBP24.45■■□□□ 1.5
APBB3-214ENST00000509914 WDR7Q9Y4E6 1490 aa24.42■■□□□ 1.5
APBB3-214ENST00000509914 MAPKBP1O60336 1514 aa24.4■■□□□ 1.5
APBB3-214ENST00000509914 KCNH8Q96L42 1107 aa24.39■■□□□ 1.49
APBB3-214ENST00000509914 KIF14Q15058 1648 aa24.38■■□□□ 1.49
APBB3-214ENST00000509914 NCOA2Q15596 1464 aa24.38■■□□□ 1.49
APBB3-214ENST00000509914 SUPT6HQ7KZ85 1726 aaKnown RBP24.36■■□□□ 1.49
APBB3-214ENST00000509914 PHLDB1Q86UU1 1377 aa24.34■■□□□ 1.49
APBB3-214ENST00000509914 ABCC10Q5T3U5 1492 aa24.33■■□□□ 1.49
APBB3-214ENST00000509914 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.3■■□□□ 1.48
APBB3-214ENST00000509914 TTC37Q6PGP7 1564 aa24.27■■□□□ 1.48
APBB3-214ENST00000509914 CCNB3Q8WWL7 1395 aa24.26■■□□□ 1.47
APBB3-214ENST00000509914 GPATCH8Q9UKJ3 1502 aaKnown RBP24.25■■□□□ 1.47
APBB3-214ENST00000509914 MYOM3Q5VTT5 1437 aa24.24■■□□□ 1.47
APBB3-214ENST00000509914 ABCA9Q8IUA7 1624 aa24.22■■□□□ 1.47
APBB3-214ENST00000509914 DIP2BQ9P265 1576 aa24.2■■□□□ 1.46
APBB3-214ENST00000509914 GLI2P10070 1586 aa24.19■■□□□ 1.46
APBB3-214ENST00000509914 FGD6Q6ZV73 1430 aa24.18■■□□□ 1.46
APBB3-214ENST00000509914 FAM69CQ0P6D2 419 aa24.18■■□□□ 1.46
APBB3-214ENST00000509914 CDC42BPAQ5VT25 1732 aa24.18■■□□□ 1.46
APBB3-214ENST00000509914 RRBP1Q9P2E9 1410 aaKnown RBP24.17■■□□□ 1.46
APBB3-214ENST00000509914 PLCH2O75038 1416 aa24.16■■□□□ 1.46
APBB3-214ENST00000509914 CFDP1Q9UEE9 299 aaPredicted RBP24.15■■□□□ 1.46
APBB3-214ENST00000509914 MIA2Q96PC5 1412 aa24.15■■□□□ 1.46
APBB3-214ENST00000509914 CD109Q6YHK3 1445 aa24.14■■□□□ 1.45
APBB3-214ENST00000509914 PREX2Q70Z35 1606 aa24.14■■□□□ 1.45
APBB3-214ENST00000509914 ITSN2Q9NZM3 1697 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms