RNA–Protein interactions for RNA: ENST00000509841.1

TNIP3-204, Transcript of TNFAIP3 interacting protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-204ENST00000509841 EFCAB5A4FU69 1503 aa16.71■□□□□ 0.27
TNIP3-204ENST00000509841 ZNF608Q9ULD9 1512 aaPredicted RBP16.7■□□□□ 0.26
TNIP3-204ENST00000509841 FOXD1Q16676 465 aa16.7■□□□□ 0.26
TNIP3-204ENST00000509841 MAGI1Q96QZ7 1491 aaPredicted RBP16.69■□□□□ 0.26
TNIP3-204ENST00000509841 ARAP1Q96P48 1450 aa16.68■□□□□ 0.26
TNIP3-204ENST00000509841 ARHGAP35Q9NRY4 1499 aa16.68■□□□□ 0.26
TNIP3-204ENST00000509841 APLP2Q06481 763 aa16.66■□□□□ 0.26
TNIP3-204ENST00000509841 RANGAP1P46060 587 aaPredicted RBP16.64■□□□□ 0.25
TNIP3-204ENST00000509841 SNAPC4Q5SXM2 1469 aa16.63■□□□□ 0.25
TNIP3-204ENST00000509841 PCGF6Q9BYE7 350 aa16.63■□□□□ 0.25
TNIP3-204ENST00000509841 SYNJ2O15056 1496 aa16.6■□□□□ 0.25
TNIP3-204ENST00000509841 IQGAP2Q13576 1575 aa16.58■□□□□ 0.24
TNIP3-204ENST00000509841 GRIN2AQ12879 1464 aa16.58■□□□□ 0.24
TNIP3-204ENST00000509841 SAMD9Q5K651 1589 aa16.57■□□□□ 0.24
TNIP3-204ENST00000509841 FMN1Q68DA7 1419 aa16.54■□□□□ 0.24
TNIP3-204ENST00000509841 MAP3K1Q13233 1512 aa16.54■□□□□ 0.24
TNIP3-204ENST00000509841 KIAA0586Q9BVV6 1533 aa16.53■□□□□ 0.24
TNIP3-204ENST00000509841 CHMP7Q8WUX9 453 aaPredicted RBP16.52■□□□□ 0.24
TNIP3-204ENST00000509841 UGGT2Q9NYU1 1516 aa16.51■□□□□ 0.23
TNIP3-204ENST00000509841 FYCO1Q9BQS8 1478 aa16.5■□□□□ 0.23
TNIP3-204ENST00000509841 ADRA2BP18089 450 aa16.47■□□□□ 0.23
TNIP3-204ENST00000509841 FHOD3Q2V2M9 1422 aa16.47■□□□□ 0.23
TNIP3-204ENST00000509841 CASKIN1Q8WXD9 1431 aa16.47■□□□□ 0.23
TNIP3-204ENST00000509841 PPARGC1BQ86YN6 1023 aaKnown RBP16.46■□□□□ 0.23
TNIP3-204ENST00000509841 NUP160Q12769 1436 aa16.46■□□□□ 0.22
TNIP3-204ENST00000509841 PCF11O94913 1555 aaKnown RBP16.45■□□□□ 0.22
TNIP3-204ENST00000509841 TIAM1Q13009 1591 aa16.44■□□□□ 0.22
TNIP3-204ENST00000509841 PPP6R1Q9UPN7 881 aa16.44■□□□□ 0.22
TNIP3-204ENST00000509841 CFAP43Q8NDM7 1665 aa16.43■□□□□ 0.22
TNIP3-204ENST00000509841 DNAJC5Q9H3Z4 198 aa16.43■□□□□ 0.22
TNIP3-204ENST00000509841 CEP170Q5SW79 1584 aa16.42■□□□□ 0.22
TNIP3-204ENST00000509841 P3H3Q8IVL6 736 aa16.41■□□□□ 0.22
TNIP3-204ENST00000509841 FBLN2P98095 1184 aa16.4■□□□□ 0.22
TNIP3-204ENST00000509841 KIAA0556O60303 1618 aa16.39■□□□□ 0.21
TNIP3-204ENST00000509841 CARMIL2Q6F5E8 1435 aa16.38■□□□□ 0.21
TNIP3-204ENST00000509841 HECW1Q76N89 1606 aa16.36■□□□□ 0.21
TNIP3-204ENST00000509841 CHD1O14646 1710 aa16.36■□□□□ 0.21
TNIP3-204ENST00000509841 CCDC18Q5T9S5 1454 aa16.35■□□□□ 0.21
TNIP3-204ENST00000509841 TTBK1Q5TCY1 1321 aaPredicted RBP16.35■□□□□ 0.21
TNIP3-204ENST00000509841 LRRC9Q6ZRR7 1453 aa16.35■□□□□ 0.21
TNIP3-204ENST00000509841 DISP1Q96F81 1524 aa16.35■□□□□ 0.21
TNIP3-204ENST00000509841 ATP1B4Q9UN42 357 aaPredicted RBP16.31■□□□□ 0.2
TNIP3-204ENST00000509841 KANK4Q5T7N3 995 aaPredicted RBP16.3■□□□□ 0.2
TNIP3-204ENST00000509841 JPH4Q96JJ6 628 aa16.3■□□□□ 0.2
TNIP3-204ENST00000509841 RRBP1Q9P2E9 1410 aaKnown RBP16.27■□□□□ 0.19
TNIP3-204ENST00000509841 EHBP1L1Q8N3D4 1523 aa16.26■□□□□ 0.19
TNIP3-204ENST00000509841 RAPGEF6Q8TEU7 1601 aa16.25■□□□□ 0.19
TNIP3-204ENST00000509841 MTUS2Q5JR59 1369 aa16.24■□□□□ 0.19
TNIP3-204ENST00000509841 SHROOM2Q13796 1616 aa16.24■□□□□ 0.19
TNIP3-204ENST00000509841 HRCP23327 699 aa16.24■□□□□ 0.19
TNIP3-204ENST00000509841 EPRSP07814 1512 aaKnown RBP16.23■□□□□ 0.19
TNIP3-204ENST00000509841 LRRIQ1Q96JM4 1722 aa16.23■□□□□ 0.19
TNIP3-204ENST00000509841 CCNB3Q8WWL7 1395 aa16.21■□□□□ 0.19
TNIP3-204ENST00000509841 SUPT6HQ7KZ85 1726 aaKnown RBP16.21■□□□□ 0.19
TNIP3-204ENST00000509841 ZEB1P37275 1124 aaPredicted RBP16.21■□□□□ 0.18
TNIP3-204ENST00000509841 PRG4Q92954 1404 aaPredicted RBP16.2■□□□□ 0.18
TNIP3-204ENST00000509841 CLASP1Q7Z460 1538 aa16.18■□□□□ 0.18
TNIP3-204ENST00000509841 CDK11AQ9UQ88 783 aaPredicted RBP16.18■□□□□ 0.18
TNIP3-204ENST00000509841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.16■□□□□ 0.18
TNIP3-204ENST00000509841 NUP153P49790 1475 aaKnown RBP16.16■□□□□ 0.18
TNIP3-204ENST00000509841 ABCA8O94911 1581 aa16.15■□□□□ 0.18
TNIP3-204ENST00000509841 PHLDB1Q86UU1 1377 aa16.13■□□□□ 0.17
TNIP3-204ENST00000509841 PTPRGP23470 1445 aa16.13■□□□□ 0.17
TNIP3-204ENST00000509841 NCOA2Q15596 1464 aa16.13■□□□□ 0.17
TNIP3-204ENST00000509841 CDK13Q14004 1512 aaKnown RBP16.12■□□□□ 0.17
TNIP3-204ENST00000509841 PLB1Q6P1J6 1458 aa16.11■□□□□ 0.17
TNIP3-204ENST00000509841 ARHGEF11O15085 1522 aa16.11■□□□□ 0.17
TNIP3-204ENST00000509841 HNRNPUL2Q1KMD3 747 aaKnown RBP16.1■□□□□ 0.17
TNIP3-204ENST00000509841 MYOM3Q5VTT5 1437 aa16.1■□□□□ 0.17
TNIP3-204ENST00000509841 FGD6Q6ZV73 1430 aa16.09■□□□□ 0.17
TNIP3-204ENST00000509841 MAGI3Q5TCQ9 1506 aa16.08■□□□□ 0.16
TNIP3-204ENST00000509841 TROQ12816 1431 aaPredicted RBP16.06■□□□□ 0.16
TNIP3-204ENST00000509841 CCER1Q8TC90 406 aaPredicted RBP16.05■□□□□ 0.16
TNIP3-204ENST00000509841 MIA2Q96PC5 1412 aa16.05■□□□□ 0.16
TNIP3-204ENST00000509841 UACAQ9BZF9 1416 aa16.05■□□□□ 0.16
TNIP3-204ENST00000509841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.04■□□□□ 0.16
TNIP3-204ENST00000509841 ADCY10Q96PN6 1610 aa16.04■□□□□ 0.16
TNIP3-204ENST00000509841 FAM50AQ14320 339 aaKnown RBP16.03■□□□□ 0.16
TNIP3-204ENST00000509841 ABCC2Q92887 1545 aa16.01■□□□□ 0.15
TNIP3-204ENST00000509841 ITSN2Q9NZM3 1697 aa16.01■□□□□ 0.15
TNIP3-204ENST00000509841 PTPN23Q9H3S7 1636 aa16.01■□□□□ 0.15
TNIP3-204ENST00000509841 OSCARQ8IYS5 282 aa16■□□□□ 0.15
TNIP3-204ENST00000509841 ATP10BO94823 1461 aa16■□□□□ 0.15
TNIP3-204ENST00000509841 TCOF1Q13428 1488 aaKnown RBP16■□□□□ 0.15
TNIP3-204ENST00000509841 UHRF1BP1LA0JNW5 1464 aa16■□□□□ 0.15
TNIP3-204ENST00000509841 PLEKHD1A6NEE1 506 aa16■□□□□ 0.15
TNIP3-204ENST00000509841 KIF14Q15058 1648 aa15.99■□□□□ 0.15
TNIP3-204ENST00000509841 ERCC6L2Q5T890 1561 aa15.98■□□□□ 0.15
TNIP3-204ENST00000509841 ARID3CA6NKF2 412 aa15.97■□□□□ 0.15
TNIP3-204ENST00000509841 CLSPNQ9HAW4 1339 aa15.95■□□□□ 0.14
TNIP3-204ENST00000509841 ITGAEP38570 1179 aa15.93■□□□□ 0.14
TNIP3-204ENST00000509841 SETD5Q9C0A6 1442 aa15.93■□□□□ 0.14
TNIP3-204ENST00000509841 PIAS4Q8N2W9 510 aaPredicted RBP15.9■□□□□ 0.14
TNIP3-204ENST00000509841 ACIN1Q9UKV3 1341 aaKnown RBP15.9■□□□□ 0.14
TNIP3-204ENST00000509841 KDM5BQ9UGL1 1544 aa15.9■□□□□ 0.14
TNIP3-204ENST00000509841 AKNAQ7Z591 1439 aa15.89■□□□□ 0.13
TNIP3-204ENST00000509841 GPATCH8Q9UKJ3 1502 aaKnown RBP15.88■□□□□ 0.13
TNIP3-204ENST00000509841 ZCCHC11Q5TAX3 1644 aaKnown RBP15.87■□□□□ 0.13
TNIP3-204ENST00000509841 ABCC10Q5T3U5 1492 aa15.87■□□□□ 0.13
TNIP3-204ENST00000509841 HFM1A2PYH4 1435 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms