RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 KIF13AQ9H1H9 1805 aa28.2■■■□□ 2.11
RAB40C-202ENST00000509637 KIAA0586Q9BVV6 1533 aa28.1■■■□□ 2.09
RAB40C-202ENST00000509637 KIF27Q86VH2 1401 aa28.09■■■□□ 2.09
RAB40C-202ENST00000509637 ADCY10Q96PN6 1610 aa28.07■■■□□ 2.08
RAB40C-202ENST00000509637 AEBP2Q6ZN18 517 aaPredicted RBP28.07■■■□□ 2.08
RAB40C-202ENST00000509637 ABCC10Q5T3U5 1492 aa28.02■■■□□ 2.08
RAB40C-202ENST00000509637 FAM69CQ0P6D2 419 aa28.02■■■□□ 2.08
RAB40C-202ENST00000509637 CUL7Q14999 1698 aa28■■■□□ 2.07
RAB40C-202ENST00000509637 CARMIL1Q5VZK9 1371 aa27.99■■■□□ 2.07
RAB40C-202ENST00000509637 MAPKBP1O60336 1514 aa27.98■■■□□ 2.07
RAB40C-202ENST00000509637 DIP2BQ9P265 1576 aa27.94■■■□□ 2.06
RAB40C-202ENST00000509637 NPM1P06748 294 aaKnown RBP eCLIP27.93■■■□□ 2.06
RAB40C-202ENST00000509637 PTPRGP23470 1445 aa27.88■■■□□ 2.05
RAB40C-202ENST00000509637 TTBK1Q5TCY1 1321 aaPredicted RBP27.87■■■□□ 2.05
RAB40C-202ENST00000509637 TNIKQ9UKE5 1360 aa27.8■■■□□ 2.04
RAB40C-202ENST00000509637 DISP1Q96F81 1524 aa27.77■■■□□ 2.04
RAB40C-202ENST00000509637 TSPOAP1O95153 1857 aa27.77■■■□□ 2.04
RAB40C-202ENST00000509637 IQGAP2Q13576 1575 aa27.77■■■□□ 2.04
RAB40C-202ENST00000509637 ABCC2Q92887 1545 aa27.73■■■□□ 2.03
RAB40C-202ENST00000509637 CARMIL2Q6F5E8 1435 aa27.72■■■□□ 2.03
RAB40C-202ENST00000509637 ASXL2Q76L83 1435 aa27.69■■■□□ 2.02
RAB40C-202ENST00000509637 KDM4FA0A1W2PPD8 638 aa27.68■■■□□ 2.02
RAB40C-202ENST00000509637 KDM6BO15054 1643 aa27.67■■■□□ 2.02
RAB40C-202ENST00000509637 UHRF1BP1LA0JNW5 1464 aa27.67■■■□□ 2.02
RAB40C-202ENST00000509637 RAPGEF2Q9Y4G8 1499 aa27.67■■■□□ 2.02
RAB40C-202ENST00000509637 UACAQ9BZF9 1416 aa27.66■■■□□ 2.02
RAB40C-202ENST00000509637 PPRC1Q5VV67 1664 aaKnown RBP27.65■■■□□ 2.02
RAB40C-202ENST00000509637 UGGT2Q9NYU1 1516 aa27.64■■■□□ 2.02
RAB40C-202ENST00000509637 PLB1Q6P1J6 1458 aa27.59■■■□□ 2.01
RAB40C-202ENST00000509637 GLI2P10070 1586 aa27.59■■■□□ 2.01
RAB40C-202ENST00000509637 KDM5BQ9UGL1 1544 aa27.58■■■□□ 2.01
RAB40C-202ENST00000509637 COL17A1Q9UMD9 1497 aaPredicted RBP27.57■■■□□ 2
RAB40C-202ENST00000509637 KIAA0556O60303 1618 aa27.56■■■□□ 2
RAB40C-202ENST00000509637 EPRSP07814 1512 aaKnown RBP27.52■■■□□ 2
RAB40C-202ENST00000509637 ZCCHC11Q5TAX3 1644 aaKnown RBP27.49■■□□□ 1.99
RAB40C-202ENST00000509637 MAP3K4Q9Y6R4 1608 aa27.45■■□□□ 1.98
RAB40C-202ENST00000509637 PRXQ9BXM0 1461 aa27.43■■□□□ 1.98
RAB40C-202ENST00000509637 CTTNBP2Q8WZ74 1663 aa27.4■■□□□ 1.98
RAB40C-202ENST00000509637 ABCA8O94911 1581 aa27.36■■□□□ 1.97
RAB40C-202ENST00000509637 WDR7Q9Y4E6 1490 aa27.34■■□□□ 1.97
RAB40C-202ENST00000509637 ADGRL1O94910 1474 aa27.28■■□□□ 1.96
RAB40C-202ENST00000509637 GOLGA3Q08378 1498 aa27.27■■□□□ 1.96
RAB40C-202ENST00000509637 KCNH8Q96L42 1107 aa27.27■■□□□ 1.96
RAB40C-202ENST00000509637 P3H3Q8IVL6 736 aa27.26■■□□□ 1.95
RAB40C-202ENST00000509637 TEX14Q8IWB6 1497 aa27.25■■□□□ 1.95
RAB40C-202ENST00000509637 ARID3CA6NKF2 412 aa27.22■■□□□ 1.95
RAB40C-202ENST00000509637 CD109Q6YHK3 1445 aa27.22■■□□□ 1.95
RAB40C-202ENST00000509637 MAGI3Q5TCQ9 1506 aa27.2■■□□□ 1.94
RAB40C-202ENST00000509637 ATP10BO94823 1461 aa27.18■■□□□ 1.94
RAB40C-202ENST00000509637 CSRNP3Q8WYN3 585 aa27.16■■□□□ 1.94
RAB40C-202ENST00000509637 CFAP43Q8NDM7 1665 aa27.14■■□□□ 1.94
RAB40C-202ENST00000509637 SAMD9Q5K651 1589 aa27.08■■□□□ 1.93
RAB40C-202ENST00000509637 ARAP3Q8WWN8 1544 aa27■■□□□ 1.91
RAB40C-202ENST00000509637 RANGAP1P46060 587 aaPredicted RBP26.98■■□□□ 1.91
RAB40C-202ENST00000509637 ABCA9Q8IUA7 1624 aa26.97■■□□□ 1.91
RAB40C-202ENST00000509637 RAPGEF6Q8TEU7 1601 aa26.97■■□□□ 1.91
RAB40C-202ENST00000509637 NUP153P49790 1475 aaKnown RBP26.96■■□□□ 1.91
RAB40C-202ENST00000509637 HECW2Q9P2P5 1572 aa26.96■■□□□ 1.91
RAB40C-202ENST00000509637 KIF21BO75037 1637 aa26.95■■□□□ 1.91
RAB40C-202ENST00000509637 FAM9AQ8IZU1 332 aaPredicted RBP26.95■■□□□ 1.9
RAB40C-202ENST00000509637 FHOD3Q2V2M9 1422 aa26.94■■□□□ 1.9
RAB40C-202ENST00000509637 ILDR1Q86SU0 546 aaPredicted RBP26.94■■□□□ 1.9
RAB40C-202ENST00000509637 RAPGEF3O95398 923 aa26.93■■□□□ 1.9
RAB40C-202ENST00000509637 EEA1Q15075 1411 aa26.86■■□□□ 1.89
RAB40C-202ENST00000509637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.85■■□□□ 1.89
RAB40C-202ENST00000509637 HNRNPUL2Q1KMD3 747 aaKnown RBP26.85■■□□□ 1.89
RAB40C-202ENST00000509637 FRMPD1Q5SYB0 1578 aa26.84■■□□□ 1.89
RAB40C-202ENST00000509637 PHLDB1Q86UU1 1377 aa26.82■■□□□ 1.88
RAB40C-202ENST00000509637 NEO1Q92859 1461 aa26.81■■□□□ 1.88
RAB40C-202ENST00000509637 ADAMTSL3P82987 1691 aa26.77■■□□□ 1.88
RAB40C-202ENST00000509637 PLEKHD1A6NEE1 506 aa26.74■■□□□ 1.87
RAB40C-202ENST00000509637 EHMT2Q96KQ7 1210 aa26.73■■□□□ 1.87
RAB40C-202ENST00000509637 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.72■■□□□ 1.872e-7■■■□□ 16.2
RAB40C-202ENST00000509637 PTPRMP28827 1452 aa26.71■■□□□ 1.87
RAB40C-202ENST00000509637 CDK13Q14004 1512 aaKnown RBP26.7■■□□□ 1.86
RAB40C-202ENST00000509637 AKNAQ7Z591 1439 aa26.68■■□□□ 1.86
RAB40C-202ENST00000509637 TTC37Q6PGP7 1564 aa26.67■■□□□ 1.86
RAB40C-202ENST00000509637 EFCAB5A4FU69 1503 aa26.67■■□□□ 1.86
RAB40C-202ENST00000509637 BCORL1Q5H9F3 1711 aa26.66■■□□□ 1.86
RAB40C-202ENST00000509637 RICTORQ6R327 1708 aa26.66■■□□□ 1.86
RAB40C-202ENST00000509637 DENND4BO75064 1496 aaPredicted RBP26.64■■□□□ 1.86
RAB40C-202ENST00000509637 FANCAO15360 1455 aa26.63■■□□□ 1.85
RAB40C-202ENST00000509637 SIGLEC1Q9BZZ2 1709 aa26.63■■□□□ 1.85
RAB40C-202ENST00000509637 MADDQ8WXG6 1647 aa26.62■■□□□ 1.85
RAB40C-202ENST00000509637 CHIC1Q5VXU3 224 aa26.62■■□□□ 1.85
RAB40C-202ENST00000509637 YEATS2Q9ULM3 1422 aa26.59■■□□□ 1.85
RAB40C-202ENST00000509637 ARHGAP35Q9NRY4 1499 aa26.59■■□□□ 1.85
RAB40C-202ENST00000509637 ARID4BQ4LE39 1312 aaPredicted RBP26.59■■□□□ 1.85
RAB40C-202ENST00000509637 ARHGEF40Q8TER5 1519 aa26.59■■□□□ 1.85
RAB40C-202ENST00000509637 UBTFP17480 764 aaKnown RBP26.56■■□□□ 1.84
RAB40C-202ENST00000509637 PLCH2O75038 1416 aa26.53■■□□□ 1.84
RAB40C-202ENST00000509637 ZMYM4Q5VZL5 1548 aa26.53■■□□□ 1.84
RAB40C-202ENST00000509637 HECW1Q76N89 1606 aa26.5■■□□□ 1.83
RAB40C-202ENST00000509637 ATP1B4Q9UN42 357 aaPredicted RBP26.5■■□□□ 1.83
RAB40C-202ENST00000509637 RIMS1Q86UR5 1692 aaKnown RBP26.5■■□□□ 1.83
RAB40C-202ENST00000509637 LMTK3Q96Q04 1460 aa26.49■■□□□ 1.83
RAB40C-202ENST00000509637 SCAPERQ9BY12 1400 aa26.49■■□□□ 1.83
RAB40C-202ENST00000509637 CFAP74Q9C0B2 1584 aa26.48■■□□□ 1.83
RAB40C-202ENST00000509637 ZFYVE16Q7Z3T8 1539 aa26.46■■□□□ 1.83
RAB40C-202ENST00000509637 KIF14Q15058 1648 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms