RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 PRXQ9BXM0 1461 aa33.7■■■□□ 2.99
HOXC6-204ENST00000509328 KIAA0586Q9BVV6 1533 aa33.7■■■□□ 2.99
HOXC6-204ENST00000509328 CSRNP3Q8WYN3 585 aa33.7■■■□□ 2.99
HOXC6-204ENST00000509328 ARAP1Q96P48 1450 aa33.63■■■□□ 2.97
HOXC6-204ENST00000509328 JPH4Q96JJ6 628 aa33.62■■■□□ 2.97
HOXC6-204ENST00000509328 FAM9AQ8IZU1 332 aaPredicted RBP33.59■■■□□ 2.97
HOXC6-204ENST00000509328 ERCC6L2Q5T890 1561 aa33.58■■■□□ 2.97
HOXC6-204ENST00000509328 IQGAP2Q13576 1575 aa33.56■■■□□ 2.96
HOXC6-204ENST00000509328 PRG4Q92954 1404 aaPredicted RBP33.55■■■□□ 2.96
HOXC6-204ENST00000509328 CTTNBP2Q8WZ74 1663 aa33.55■■■□□ 2.96
HOXC6-204ENST00000509328 CYB5RLQ6IPT4 315 aa33.53■■■□□ 2.96
HOXC6-204ENST00000509328 KIF21BO75037 1637 aa33.46■■■□□ 2.95
HOXC6-204ENST00000509328 UGGT2Q9NYU1 1516 aa33.38■■■□□ 2.93
HOXC6-204ENST00000509328 CARMIL2Q6F5E8 1435 aa33.35■■■□□ 2.93
HOXC6-204ENST00000509328 DISP1Q96F81 1524 aa33.28■■■□□ 2.92
HOXC6-204ENST00000509328 GOLGA3Q08378 1498 aa33.24■■■□□ 2.91
HOXC6-204ENST00000509328 KIAA0556O60303 1618 aa33.24■■■□□ 2.91
HOXC6-204ENST00000509328 TNIKQ9UKE5 1360 aa33.21■■■□□ 2.91
HOXC6-204ENST00000509328 PTPRGP23470 1445 aa33.18■■■□□ 2.9
HOXC6-204ENST00000509328 EHMT2Q96KQ7 1210 aa33.12■■■□□ 2.89
HOXC6-204ENST00000509328 UBTFP17480 764 aaKnown RBP33.11■■■□□ 2.89
HOXC6-204ENST00000509328 SAMD9Q5K651 1589 aa33.08■■■□□ 2.89
HOXC6-204ENST00000509328 TTBK1Q5TCY1 1321 aaPredicted RBP33.07■■■□□ 2.88
HOXC6-204ENST00000509328 ADCY10Q96PN6 1610 aa33.06■■■□□ 2.88
HOXC6-204ENST00000509328 RANGAP1P46060 587 aaPredicted RBP32.97■■■□□ 2.87
HOXC6-204ENST00000509328 UACAQ9BZF9 1416 aa32.96■■■□□ 2.87
HOXC6-204ENST00000509328 EFCAB5A4FU69 1503 aa32.96■■■□□ 2.87
HOXC6-204ENST00000509328 UHRF1BP1LA0JNW5 1464 aa32.94■■■□□ 2.86
HOXC6-204ENST00000509328 P3H3Q8IVL6 736 aa32.94■■■□□ 2.86
HOXC6-204ENST00000509328 ABCC2Q92887 1545 aa32.92■■■□□ 2.86
HOXC6-204ENST00000509328 NPM1P06748 294 aaKnown RBP eCLIP32.92■■■□□ 2.86
HOXC6-204ENST00000509328 ABCA8O94911 1581 aa32.86■■■□□ 2.85
HOXC6-204ENST00000509328 PLB1Q6P1J6 1458 aa32.86■■■□□ 2.85
HOXC6-204ENST00000509328 FHOD3Q2V2M9 1422 aa32.83■■■□□ 2.85
HOXC6-204ENST00000509328 MAPKBP1O60336 1514 aa32.82■■■□□ 2.85
HOXC6-204ENST00000509328 TRHP20396 242 aaPredicted RBP32.81■■■□□ 2.84
HOXC6-204ENST00000509328 KDM5BQ9UGL1 1544 aa32.78■■■□□ 2.84
HOXC6-204ENST00000509328 ARHGAP35Q9NRY4 1499 aa32.78■■■□□ 2.84
HOXC6-204ENST00000509328 ZCCHC11Q5TAX3 1644 aaKnown RBP32.75■■■□□ 2.83
HOXC6-204ENST00000509328 RAPGEF6Q8TEU7 1601 aa32.73■■■□□ 2.83
HOXC6-204ENST00000509328 KIF13AQ9H1H9 1805 aa32.67■■■□□ 2.82
HOXC6-204ENST00000509328 ASXL2Q76L83 1435 aa32.64■■■□□ 2.82
HOXC6-204ENST00000509328 ABCC10Q5T3U5 1492 aa32.63■■■□□ 2.81
HOXC6-204ENST00000509328 CLIP1P30622 1438 aa32.63■■■□□ 2.81
HOXC6-204ENST00000509328 FMN1Q68DA7 1419 aa32.63■■■□□ 2.81
HOXC6-204ENST00000509328 LOC105371045A0A1W2PR82 267 aa32.61■■■□□ 2.81
HOXC6-204ENST00000509328 DIP2BQ9P265 1576 aa32.61■■■□□ 2.81
HOXC6-204ENST00000509328 NUP153P49790 1475 aaKnown RBP32.57■■■□□ 2.8
HOXC6-204ENST00000509328 ATP10BO94823 1461 aa32.56■■■□□ 2.8
HOXC6-204ENST00000509328 FAM69CQ0P6D2 419 aa32.53■■■□□ 2.8
HOXC6-204ENST00000509328 CEP162Q5TB80 1403 aa32.51■■■□□ 2.8
HOXC6-204ENST00000509328 WDR7Q9Y4E6 1490 aa32.51■■■□□ 2.79
HOXC6-204ENST00000509328 ARID3CA6NKF2 412 aa32.51■■■□□ 2.79
HOXC6-204ENST00000509328 HECW1Q76N89 1606 aa32.49■■■□□ 2.79
HOXC6-204ENST00000509328 GLI2P10070 1586 aa32.47■■■□□ 2.79
HOXC6-204ENST00000509328 EPRSP07814 1512 aaKnown RBP32.46■■■□□ 2.79
HOXC6-204ENST00000509328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.42■■■□□ 2.78
HOXC6-204ENST00000509328 HNRNPUL2Q1KMD3 747 aaKnown RBP32.42■■■□□ 2.78
HOXC6-204ENST00000509328 PCF11O94913 1555 aaKnown RBP32.4■■■□□ 2.78
HOXC6-204ENST00000509328 TSPOAP1O95153 1857 aa32.38■■■□□ 2.77
HOXC6-204ENST00000509328 CASKIN1Q8WXD9 1431 aa32.38■■■□□ 2.77
HOXC6-204ENST00000509328 ATP1B4Q9UN42 357 aaPredicted RBP32.38■■■□□ 2.77
HOXC6-204ENST00000509328 CDK13Q14004 1512 aaKnown RBP32.36■■■□□ 2.77
HOXC6-204ENST00000509328 LRRIQ1Q96JM4 1722 aa32.35■■■□□ 2.77
HOXC6-204ENST00000509328 MAP3K4Q9Y6R4 1608 aa32.34■■■□□ 2.77
HOXC6-204ENST00000509328 KCNH8Q96L42 1107 aa32.33■■■□□ 2.77
HOXC6-204ENST00000509328 FYCO1Q9BQS8 1478 aa32.33■■■□□ 2.77
HOXC6-204ENST00000509328 PLEKHD1A6NEE1 506 aa32.3■■■□□ 2.76
HOXC6-204ENST00000509328 CFAP43Q8NDM7 1665 aa32.29■■■□□ 2.76
HOXC6-204ENST00000509328 CCDC18Q5T9S5 1454 aa32.26■■■□□ 2.75
HOXC6-204ENST00000509328 PPRC1Q5VV67 1664 aaKnown RBP32.26■■■□□ 2.75
HOXC6-204ENST00000509328 ABCA9Q8IUA7 1624 aa32.22■■■□□ 2.75
HOXC6-204ENST00000509328 CDK11AQ9UQ88 783 aaPredicted RBP32.22■■■□□ 2.75
HOXC6-204ENST00000509328 CD109Q6YHK3 1445 aa32.18■■■□□ 2.74
HOXC6-204ENST00000509328 TEX14Q8IWB6 1497 aa32.16■■■□□ 2.74
HOXC6-204ENST00000509328 MAGI3Q5TCQ9 1506 aa32.14■■■□□ 2.74
HOXC6-204ENST00000509328 VPS8Q8N3P4 1428 aa32.13■■■□□ 2.73
HOXC6-204ENST00000509328 TROQ12816 1431 aaPredicted RBP32.11■■■□□ 2.73
HOXC6-204ENST00000509328 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.1■■■□□ 2.731e-6■■■■□ 23.9
HOXC6-204ENST00000509328 KIF14Q15058 1648 aa32.07■■■□□ 2.72
HOXC6-204ENST00000509328 TTC37Q6PGP7 1564 aa32.06■■■□□ 2.72
HOXC6-204ENST00000509328 KDM6BO15054 1643 aa32.05■■■□□ 2.72
HOXC6-204ENST00000509328 MYO5CQ9NQX4 1742 aa31.97■■■□□ 2.71
HOXC6-204ENST00000509328 NEO1Q92859 1461 aa31.92■■■□□ 2.7
HOXC6-204ENST00000509328 TIAM1Q13009 1591 aa31.92■■■□□ 2.7
HOXC6-204ENST00000509328 MTUS2Q5JR59 1369 aa31.92■■■□□ 2.7
HOXC6-204ENST00000509328 PHLDB1Q86UU1 1377 aa31.92■■■□□ 2.7
HOXC6-204ENST00000509328 CFAP74Q9C0B2 1584 aa31.91■■■□□ 2.7
HOXC6-204ENST00000509328 PLCH2O75038 1416 aa31.89■■■□□ 2.7
HOXC6-204ENST00000509328 EHBP1L1Q8N3D4 1523 aa31.89■■■□□ 2.7
HOXC6-204ENST00000509328 COL17A1Q9UMD9 1497 aaPredicted RBP31.88■■■□□ 2.69
HOXC6-204ENST00000509328 ARAP3Q8WWN8 1544 aa31.88■■■□□ 2.69
HOXC6-204ENST00000509328 MAP3K1Q13233 1512 aa31.86■■■□□ 2.69
HOXC6-204ENST00000509328 FANCAO15360 1455 aa31.86■■■□□ 2.69
HOXC6-204ENST00000509328 CDC42BPAQ5VT25 1732 aa31.82■■■□□ 2.68
HOXC6-204ENST00000509328 CDC42BPBQ9Y5S2 1711 aa31.82■■■□□ 2.68
HOXC6-204ENST00000509328 PREX2Q70Z35 1606 aa31.82■■■□□ 2.68
HOXC6-204ENST00000509328 AKNAQ7Z591 1439 aa31.8■■■□□ 2.68
HOXC6-204ENST00000509328 ARHGAP5Q13017 1502 aa31.78■■■□□ 2.68
HOXC6-204ENST00000509328 EFCAB2Q5VUJ9 269 aa31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms