RNA–Protein interactions for RNA: ENST00000509208.1

COPG1-204, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 2

Gene COPG1, Length 472 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-204ENST00000509208 ARHGEF11O15085 1522 aa17.46■□□□□ 0.39
COPG1-204ENST00000509208 KIF21BO75037 1637 aa17.43■□□□□ 0.38
COPG1-204ENST00000509208 CSRNP3Q8WYN3 585 aa17.42■□□□□ 0.38
COPG1-204ENST00000509208 CTTNBP2Q8WZ74 1663 aa17.42■□□□□ 0.38
COPG1-204ENST00000509208 KIAA0586Q9BVV6 1533 aa17.42■□□□□ 0.38
COPG1-204ENST00000509208 FAM9AQ8IZU1 332 aaPredicted RBP17.41■□□□□ 0.38
COPG1-204ENST00000509208 IQGAP2Q13576 1575 aa17.39■□□□□ 0.37
COPG1-204ENST00000509208 ERCC6L2Q5T890 1561 aa17.39■□□□□ 0.37
COPG1-204ENST00000509208 ARAP1Q96P48 1450 aa17.35■□□□□ 0.37
COPG1-204ENST00000509208 PRG4Q92954 1404 aaPredicted RBP17.3■□□□□ 0.36
COPG1-204ENST00000509208 UGGT2Q9NYU1 1516 aa17.3■□□□□ 0.36
COPG1-204ENST00000509208 JPH4Q96JJ6 628 aa17.29■□□□□ 0.36
COPG1-204ENST00000509208 GOLGA3Q08378 1498 aa17.28■□□□□ 0.36
COPG1-204ENST00000509208 DISP1Q96F81 1524 aa17.25■□□□□ 0.35
COPG1-204ENST00000509208 KIAA0556O60303 1618 aa17.24■□□□□ 0.35
COPG1-204ENST00000509208 SAMD9Q5K651 1589 aa17.19■□□□□ 0.34
COPG1-204ENST00000509208 CARMIL2Q6F5E8 1435 aa17.18■□□□□ 0.34
COPG1-204ENST00000509208 CYB5RLQ6IPT4 315 aa17.17■□□□□ 0.34
COPG1-204ENST00000509208 EHMT2Q96KQ7 1210 aa17.17■□□□□ 0.34
COPG1-204ENST00000509208 TNIKQ9UKE5 1360 aa17.13■□□□□ 0.33
COPG1-204ENST00000509208 EFCAB5A4FU69 1503 aa17.11■□□□□ 0.33
COPG1-204ENST00000509208 ADCY10Q96PN6 1610 aa17.11■□□□□ 0.33
COPG1-204ENST00000509208 UBTFP17480 764 aaKnown RBP17.1■□□□□ 0.33
COPG1-204ENST00000509208 PTPRGP23470 1445 aa17.09■□□□□ 0.33
COPG1-204ENST00000509208 ARHGAP35Q9NRY4 1499 aa17.05■□□□□ 0.32
COPG1-204ENST00000509208 FHOD3Q2V2M9 1422 aa17.04■□□□□ 0.32
COPG1-204ENST00000509208 ABCC2Q92887 1545 aa17.04■□□□□ 0.32
COPG1-204ENST00000509208 ABCA8O94911 1581 aa17.03■□□□□ 0.32
COPG1-204ENST00000509208 RANGAP1P46060 587 aaPredicted RBP17.03■□□□□ 0.32
COPG1-204ENST00000509208 TTBK1Q5TCY1 1321 aaPredicted RBP17.02■□□□□ 0.32
COPG1-204ENST00000509208 UHRF1BP1LA0JNW5 1464 aa17.02■□□□□ 0.32
COPG1-204ENST00000509208 PLB1Q6P1J6 1458 aa17.02■□□□□ 0.32
COPG1-204ENST00000509208 UACAQ9BZF9 1416 aa17.01■□□□□ 0.31
COPG1-204ENST00000509208 P3H3Q8IVL6 736 aa17■□□□□ 0.31
COPG1-204ENST00000509208 CLIP1P30622 1438 aa16.96■□□□□ 0.31
COPG1-204ENST00000509208 RAPGEF6Q8TEU7 1601 aa16.96■□□□□ 0.31
COPG1-204ENST00000509208 LOC105371045A0A1W2PR82 267 aa16.96■□□□□ 0.31
COPG1-204ENST00000509208 ZCCHC11Q5TAX3 1644 aaKnown RBP16.95■□□□□ 0.3
COPG1-204ENST00000509208 CEP162Q5TB80 1403 aa16.95■□□□□ 0.3
COPG1-204ENST00000509208 MAPKBP1O60336 1514 aa16.94■□□□□ 0.3
COPG1-204ENST00000509208 KDM5BQ9UGL1 1544 aa16.94■□□□□ 0.3
COPG1-204ENST00000509208 NUP153P49790 1475 aaKnown RBP16.91■□□□□ 0.3
COPG1-204ENST00000509208 PCF11O94913 1555 aaKnown RBP16.89■□□□□ 0.29
COPG1-204ENST00000509208 FMN1Q68DA7 1419 aa16.88■□□□□ 0.29
COPG1-204ENST00000509208 HECW1Q76N89 1606 aa16.86■□□□□ 0.29
COPG1-204ENST00000509208 KIF13AQ9H1H9 1805 aa16.86■□□□□ 0.29
COPG1-204ENST00000509208 LRRIQ1Q96JM4 1722 aa16.85■□□□□ 0.29
COPG1-204ENST00000509208 DIP2BQ9P265 1576 aa16.85■□□□□ 0.29
COPG1-204ENST00000509208 ASXL2Q76L83 1435 aa16.84■□□□□ 0.29
COPG1-204ENST00000509208 ATP10BO94823 1461 aa16.84■□□□□ 0.29
COPG1-204ENST00000509208 NPM1P06748 294 aaKnown RBP eCLIP16.82■□□□□ 0.28
COPG1-204ENST00000509208 CDK13Q14004 1512 aaKnown RBP16.8■□□□□ 0.28
COPG1-204ENST00000509208 ABCC10Q5T3U5 1492 aa16.8■□□□□ 0.28
COPG1-204ENST00000509208 FYCO1Q9BQS8 1478 aa16.8■□□□□ 0.28
COPG1-204ENST00000509208 WDR7Q9Y4E6 1490 aa16.8■□□□□ 0.28
COPG1-204ENST00000509208 CASKIN1Q8WXD9 1431 aa16.8■□□□□ 0.28
COPG1-204ENST00000509208 ARID3CA6NKF2 412 aa16.79■□□□□ 0.28
COPG1-204ENST00000509208 EPRSP07814 1512 aaKnown RBP16.79■□□□□ 0.28
COPG1-204ENST00000509208 GLI2P10070 1586 aa16.75■□□□□ 0.27
COPG1-204ENST00000509208 TRHP20396 242 aaPredicted RBP16.73■□□□□ 0.27
COPG1-204ENST00000509208 CCDC18Q5T9S5 1454 aa16.73■□□□□ 0.27
COPG1-204ENST00000509208 VPS8Q8N3P4 1428 aa16.72■□□□□ 0.27
COPG1-204ENST00000509208 MAP3K4Q9Y6R4 1608 aa16.71■□□□□ 0.27
COPG1-204ENST00000509208 PPRC1Q5VV67 1664 aaKnown RBP16.69■□□□□ 0.26
COPG1-204ENST00000509208 CFAP43Q8NDM7 1665 aa16.69■□□□□ 0.26
COPG1-204ENST00000509208 TSPOAP1O95153 1857 aa16.68■□□□□ 0.26
COPG1-204ENST00000509208 FAM69CQ0P6D2 419 aa16.68■□□□□ 0.26
COPG1-204ENST00000509208 ABCA9Q8IUA7 1624 aa16.67■□□□□ 0.26
COPG1-204ENST00000509208 MAGI3Q5TCQ9 1506 aa16.67■□□□□ 0.26
COPG1-204ENST00000509208 ATP1B4Q9UN42 357 aaPredicted RBP16.67■□□□□ 0.26
COPG1-204ENST00000509208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.66■□□□□ 0.26
COPG1-204ENST00000509208 HNRNPUL2Q1KMD3 747 aaKnown RBP16.66■□□□□ 0.26
COPG1-204ENST00000509208 KIF14Q15058 1648 aa16.65■□□□□ 0.26
COPG1-204ENST00000509208 TTC37Q6PGP7 1564 aa16.64■□□□□ 0.25
COPG1-204ENST00000509208 TROQ12816 1431 aaPredicted RBP16.63■□□□□ 0.25
COPG1-204ENST00000509208 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.62■□□□□ 0.25
COPG1-204ENST00000509208 TIAM1Q13009 1591 aa16.62■□□□□ 0.25
COPG1-204ENST00000509208 KCNH8Q96L42 1107 aa16.61■□□□□ 0.25
COPG1-204ENST00000509208 PLEKHD1A6NEE1 506 aa16.6■□□□□ 0.25
COPG1-204ENST00000509208 EHBP1L1Q8N3D4 1523 aa16.58■□□□□ 0.24
COPG1-204ENST00000509208 CD109Q6YHK3 1445 aa16.57■□□□□ 0.24
COPG1-204ENST00000509208 MAP3K1Q13233 1512 aa16.56■□□□□ 0.24
COPG1-204ENST00000509208 CDK11AQ9UQ88 783 aaPredicted RBP16.56■□□□□ 0.24
COPG1-204ENST00000509208 MYO5CQ9NQX4 1742 aa16.56■□□□□ 0.24
COPG1-204ENST00000509208 TEX14Q8IWB6 1497 aa16.54■□□□□ 0.24
COPG1-204ENST00000509208 CDC42BPAQ5VT25 1732 aa16.53■□□□□ 0.24
COPG1-204ENST00000509208 PREX2Q70Z35 1606 aa16.52■□□□□ 0.24
COPG1-204ENST00000509208 MTUS2Q5JR59 1369 aa16.51■□□□□ 0.23
COPG1-204ENST00000509208 LRRC9Q6ZRR7 1453 aa16.51■□□□□ 0.23
COPG1-204ENST00000509208 ARAP3Q8WWN8 1544 aa16.5■□□□□ 0.23
COPG1-204ENST00000509208 CDC42BPBQ9Y5S2 1711 aa16.5■□□□□ 0.23
COPG1-204ENST00000509208 KDM6BO15054 1643 aa16.49■□□□□ 0.23
COPG1-204ENST00000509208 SUPT6HQ7KZ85 1726 aaKnown RBP16.49■□□□□ 0.23
COPG1-204ENST00000509208 CFAP74Q9C0B2 1584 aa16.49■□□□□ 0.23
COPG1-204ENST00000509208 PLCH2O75038 1416 aa16.47■□□□□ 0.23
COPG1-204ENST00000509208 NEO1Q92859 1461 aa16.47■□□□□ 0.23
COPG1-204ENST00000509208 FANCAO15360 1455 aa16.46■□□□□ 0.23
COPG1-204ENST00000509208 COL17A1Q9UMD9 1497 aaPredicted RBP16.46■□□□□ 0.23
COPG1-204ENST00000509208 NCOA2Q15596 1464 aa16.45■□□□□ 0.22
COPG1-204ENST00000509208 ITSN2Q9NZM3 1697 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms