RNA–Protein interactions for RNA: ENST00000509048.1

RETREG1-204, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-204ENST00000509048 JPH4Q96JJ6 628 aa39.74■■■■□ 3.95
RETREG1-204ENST00000509048 PRG4Q92954 1404 aaPredicted RBP39.73■■■■□ 3.95
RETREG1-204ENST00000509048 KIAA0586Q9BVV6 1533 aa39.63■■■■□ 3.93
RETREG1-204ENST00000509048 CARMIL1Q5VZK9 1371 aa39.62■■■■□ 3.93
RETREG1-204ENST00000509048 RAPGEF2Q9Y4G8 1499 aa39.31■■■■□ 3.88
RETREG1-204ENST00000509048 IQGAP2Q13576 1575 aa39.29■■■■□ 3.88
RETREG1-204ENST00000509048 ADCY10Q96PN6 1610 aa39.24■■■■□ 3.87
RETREG1-204ENST00000509048 CARMIL2Q6F5E8 1435 aa39.2■■■■□ 3.87
RETREG1-204ENST00000509048 PTPRGP23470 1445 aa39.15■■■■□ 3.86
RETREG1-204ENST00000509048 TNIKQ9UKE5 1360 aa39.14■■■■□ 3.86
RETREG1-204ENST00000509048 NPM1P06748 294 aaKnown RBP eCLIP39.14■■■■□ 3.86
RETREG1-204ENST00000509048 MAPKBP1O60336 1514 aa39.14■■■■□ 3.86
RETREG1-204ENST00000509048 KIF13AQ9H1H9 1805 aa39.12■■■■□ 3.85
RETREG1-204ENST00000509048 DISP1Q96F81 1524 aa39.09■■■■□ 3.85
RETREG1-204ENST00000509048 UGGT2Q9NYU1 1516 aa39.09■■■■□ 3.85
RETREG1-204ENST00000509048 ABCC10Q5T3U5 1492 aa39.04■■■■□ 3.84
RETREG1-204ENST00000509048 PRXQ9BXM0 1461 aa39.04■■■■□ 3.84
RETREG1-204ENST00000509048 TTBK1Q5TCY1 1321 aaPredicted RBP38.97■■■■□ 3.83
RETREG1-204ENST00000509048 CTTNBP2Q8WZ74 1663 aa38.96■■■■□ 3.83
RETREG1-204ENST00000509048 DIP2BQ9P265 1576 aa38.95■■■■□ 3.83
RETREG1-204ENST00000509048 FAM69CQ0P6D2 419 aa38.94■■■■□ 3.82
RETREG1-204ENST00000509048 KIAA0556O60303 1618 aa38.93■■■■□ 3.82
RETREG1-204ENST00000509048 ABCC2Q92887 1545 aa38.93■■■■□ 3.82
RETREG1-204ENST00000509048 UHRF1BP1LA0JNW5 1464 aa38.92■■■■□ 3.82
RETREG1-204ENST00000509048 UACAQ9BZF9 1416 aa38.89■■■■□ 3.82
RETREG1-204ENST00000509048 CSRNP3Q8WYN3 585 aa38.78■■■■□ 3.8
RETREG1-204ENST00000509048 GOLGA3Q08378 1498 aa38.78■■■■□ 3.8
RETREG1-204ENST00000509048 ASXL2Q76L83 1435 aa38.74■■■■□ 3.79
RETREG1-204ENST00000509048 EEA1Q15075 1411 aa38.73■■■■□ 3.79
RETREG1-204ENST00000509048 KDM5BQ9UGL1 1544 aa38.73■■■■□ 3.79
RETREG1-204ENST00000509048 PLB1Q6P1J6 1458 aa38.73■■■■□ 3.79
RETREG1-204ENST00000509048 ZCCHC11Q5TAX3 1644 aaKnown RBP38.62■■■■□ 3.77
RETREG1-204ENST00000509048 GLI2P10070 1586 aa38.61■■■■□ 3.77
RETREG1-204ENST00000509048 TSPOAP1O95153 1857 aa38.58■■■■□ 3.77
RETREG1-204ENST00000509048 ABCA8O94911 1581 aa38.57■■■■□ 3.76
RETREG1-204ENST00000509048 EPRSP07814 1512 aaKnown RBP38.52■■■■□ 3.76
RETREG1-204ENST00000509048 KDM6BO15054 1643 aa38.48■■■■□ 3.75
RETREG1-204ENST00000509048 SAMD9Q5K651 1589 aa38.46■■■■□ 3.75
RETREG1-204ENST00000509048 PPRC1Q5VV67 1664 aaKnown RBP38.45■■■■□ 3.75
RETREG1-204ENST00000509048 FAM9AQ8IZU1 332 aaPredicted RBP38.44■■■■□ 3.74
RETREG1-204ENST00000509048 WDR7Q9Y4E6 1490 aa38.43■■■■□ 3.74
RETREG1-204ENST00000509048 AEBP2Q6ZN18 517 aaPredicted RBP38.42■■■■□ 3.74
RETREG1-204ENST00000509048 CHIC1Q5VXU3 224 aa38.41■■■■□ 3.74
RETREG1-204ENST00000509048 P3H3Q8IVL6 736 aa38.4■■■■□ 3.74
RETREG1-204ENST00000509048 MAP3K4Q9Y6R4 1608 aa38.4■■■■□ 3.74
RETREG1-204ENST00000509048 KIF21BO75037 1637 aa38.39■■■■□ 3.74
RETREG1-204ENST00000509048 TEX14Q8IWB6 1497 aa38.26■■■■□ 3.72
RETREG1-204ENST00000509048 ATP10BO94823 1461 aa38.23■■■■□ 3.71
RETREG1-204ENST00000509048 RAPGEF6Q8TEU7 1601 aa38.2■■■■□ 3.71
RETREG1-204ENST00000509048 RANGAP1P46060 587 aaPredicted RBP38.18■■■■□ 3.7
RETREG1-204ENST00000509048 KCNH8Q96L42 1107 aa38.17■■■■□ 3.7
RETREG1-204ENST00000509048 FHOD3Q2V2M9 1422 aa38.17■■■■□ 3.7
RETREG1-204ENST00000509048 CFAP43Q8NDM7 1665 aa38.17■■■■□ 3.7
RETREG1-204ENST00000509048 COL17A1Q9UMD9 1497 aaPredicted RBP38.15■■■■□ 3.7
RETREG1-204ENST00000509048 EFCAB5A4FU69 1503 aa38.15■■■■□ 3.7
RETREG1-204ENST00000509048 CD109Q6YHK3 1445 aa38.14■■■■□ 3.7
RETREG1-204ENST00000509048 ARID3CA6NKF2 412 aa38.14■■■■□ 3.7
RETREG1-204ENST00000509048 MAGI3Q5TCQ9 1506 aa38.13■■■■□ 3.69
RETREG1-204ENST00000509048 NUP153P49790 1475 aaKnown RBP38.09■■■■□ 3.69
RETREG1-204ENST00000509048 UBTFP17480 764 aaKnown RBP38.01■■■■□ 3.68
RETREG1-204ENST00000509048 EHMT2Q96KQ7 1210 aa37.97■■■■□ 3.67
RETREG1-204ENST00000509048 ABCA9Q8IUA7 1624 aa37.97■■■■□ 3.67
RETREG1-204ENST00000509048 KDM4FA0A1W2PPD8 638 aa37.93■■■■□ 3.66
RETREG1-204ENST00000509048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.93■■■■□ 3.66
RETREG1-204ENST00000509048 HNRNPUL2Q1KMD3 747 aaKnown RBP37.93■■■■□ 3.66
RETREG1-204ENST00000509048 ARHGAP35Q9NRY4 1499 aa37.86■■■■□ 3.65
RETREG1-204ENST00000509048 ARAP3Q8WWN8 1544 aa37.82■■■■□ 3.65
RETREG1-204ENST00000509048 PLEKHD1A6NEE1 506 aa37.8■■■■□ 3.64
RETREG1-204ENST00000509048 FMN1Q68DA7 1419 aa37.79■■■■□ 3.64
RETREG1-204ENST00000509048 PHLDB1Q86UU1 1377 aa37.79■■■■□ 3.64
RETREG1-204ENST00000509048 CDK13Q14004 1512 aaKnown RBP37.73■■■■□ 3.63
RETREG1-204ENST00000509048 NEO1Q92859 1461 aa37.73■■■■□ 3.63
RETREG1-204ENST00000509048 ADGRL1O94910 1474 aa37.72■■■■□ 3.63
RETREG1-204ENST00000509048 HECW1Q76N89 1606 aa37.69■■■■□ 3.62
RETREG1-204ENST00000509048 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.66■■■■□ 3.62
RETREG1-204ENST00000509048 TTC37Q6PGP7 1564 aa37.59■■■■□ 3.61
RETREG1-204ENST00000509048 ATP1B4Q9UN42 357 aaPredicted RBP37.57■■■■□ 3.6
RETREG1-204ENST00000509048 RAPGEF3O95398 923 aa37.55■■■■□ 3.6
RETREG1-204ENST00000509048 FRMPD1Q5SYB0 1578 aa37.53■■■■□ 3.6
RETREG1-204ENST00000509048 FANCAO15360 1455 aa37.52■■■■□ 3.6
RETREG1-204ENST00000509048 CFAP74Q9C0B2 1584 aa37.52■■■■□ 3.6
RETREG1-204ENST00000509048 CDK11AQ9UQ88 783 aaPredicted RBP37.5■■■■□ 3.59
RETREG1-204ENST00000509048 AKNAQ7Z591 1439 aa37.5■■■■□ 3.59
RETREG1-204ENST00000509048 LRRIQ1Q96JM4 1722 aa37.46■■■■□ 3.59
RETREG1-204ENST00000509048 DENND4BO75064 1496 aaPredicted RBP37.44■■■■□ 3.58
RETREG1-204ENST00000509048 PLCH2O75038 1416 aa37.44■■■■□ 3.58
RETREG1-204ENST00000509048 CASKIN1Q8WXD9 1431 aa37.44■■■■□ 3.58
RETREG1-204ENST00000509048 TROQ12816 1431 aaPredicted RBP37.42■■■■□ 3.58
RETREG1-204ENST00000509048 PCF11O94913 1555 aaKnown RBP37.42■■■■□ 3.58
RETREG1-204ENST00000509048 RICTORQ6R327 1708 aa37.41■■■■□ 3.58
RETREG1-204ENST00000509048 CLIP1P30622 1438 aa37.38■■■■□ 3.57
RETREG1-204ENST00000509048 KIF14Q15058 1648 aa37.37■■■■□ 3.57
RETREG1-204ENST00000509048 CCDC18Q5T9S5 1454 aa37.35■■■■□ 3.57
RETREG1-204ENST00000509048 MYO5CQ9NQX4 1742 aa37.33■■■■□ 3.57
RETREG1-204ENST00000509048 FYCO1Q9BQS8 1478 aa37.32■■■■□ 3.56
RETREG1-204ENST00000509048 ARHGEF40Q8TER5 1519 aa37.31■■■■□ 3.56
RETREG1-204ENST00000509048 ZMYM4Q5VZL5 1548 aa37.3■■■■□ 3.56
RETREG1-204ENST00000509048 SCAPERQ9BY12 1400 aa37.26■■■■□ 3.55
RETREG1-204ENST00000509048 EFCAB2Q5VUJ9 269 aa37.25■■■■□ 3.55
RETREG1-204ENST00000509048 POGZQ7Z3K3 1410 aa37.24■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms