RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 CARMIL1Q5VZK9 1371 aa21.61■■□□□ 1.05
PDPN-208ENST00000509009 KIAA0586Q9BVV6 1533 aa21.6■■□□□ 1.05
PDPN-208ENST00000509009 RUSC2Q8N2Y8 1516 aa21.58■■□□□ 1.04
PDPN-208ENST00000509009 CUL7Q14999 1698 aa21.55■■□□□ 1.04
PDPN-208ENST00000509009 NPM1P06748 294 aaKnown RBP eCLIP21.5■■□□□ 1.03
PDPN-208ENST00000509009 PTPRGP23470 1445 aa21.41■■□□□ 1.02
PDPN-208ENST00000509009 FAM69CQ0P6D2 419 aa21.4■■□□□ 1.02
PDPN-208ENST00000509009 TTBK1Q5TCY1 1321 aaPredicted RBP21.39■■□□□ 1.01
PDPN-208ENST00000509009 CARMIL2Q6F5E8 1435 aa21.38■■□□□ 1.01
PDPN-208ENST00000509009 RAPGEF2Q9Y4G8 1499 aa21.37■■□□□ 1.01
PDPN-208ENST00000509009 TNIKQ9UKE5 1360 aa21.36■■□□□ 1.01
PDPN-208ENST00000509009 ADCY10Q96PN6 1610 aa21.36■■□□□ 1.01
PDPN-208ENST00000509009 ABCC10Q5T3U5 1492 aa21.34■■□□□ 1.01
PDPN-208ENST00000509009 IQGAP2Q13576 1575 aa21.32■■□□□ 1
PDPN-208ENST00000509009 MAPKBP1O60336 1514 aa21.32■■□□□ 1
PDPN-208ENST00000509009 KIF13AQ9H1H9 1805 aa21.31■■□□□ 1
PDPN-208ENST00000509009 DISP1Q96F81 1524 aa21.28■■□□□ 1
PDPN-208ENST00000509009 UGGT2Q9NYU1 1516 aa21.24■□□□□ 0.99
PDPN-208ENST00000509009 UACAQ9BZF9 1416 aa21.22■□□□□ 0.99
PDPN-208ENST00000509009 ABCC2Q92887 1545 aa21.22■□□□□ 0.99
PDPN-208ENST00000509009 DIP2BQ9P265 1576 aa21.21■□□□□ 0.99
PDPN-208ENST00000509009 UHRF1BP1LA0JNW5 1464 aa21.2■□□□□ 0.98
PDPN-208ENST00000509009 AEBP2Q6ZN18 517 aaPredicted RBP21.2■□□□□ 0.98
PDPN-208ENST00000509009 PRXQ9BXM0 1461 aa21.2■□□□□ 0.98
PDPN-208ENST00000509009 ASXL2Q76L83 1435 aa21.16■□□□□ 0.98
PDPN-208ENST00000509009 CSRNP3Q8WYN3 585 aa21.15■□□□□ 0.98
PDPN-208ENST00000509009 PLB1Q6P1J6 1458 aa21.14■□□□□ 0.98
PDPN-208ENST00000509009 KIAA0556O60303 1618 aa21.11■□□□□ 0.97
PDPN-208ENST00000509009 KDM5BQ9UGL1 1544 aa21.11■□□□□ 0.97
PDPN-208ENST00000509009 GOLGA3Q08378 1498 aa21.08■□□□□ 0.97
PDPN-208ENST00000509009 TSPOAP1O95153 1857 aa21.05■□□□□ 0.96
PDPN-208ENST00000509009 GLI2P10070 1586 aa21.05■□□□□ 0.96
PDPN-208ENST00000509009 CTTNBP2Q8WZ74 1663 aa21.05■□□□□ 0.96
PDPN-208ENST00000509009 P3H3Q8IVL6 736 aa21.02■□□□□ 0.96
PDPN-208ENST00000509009 EPRSP07814 1512 aaKnown RBP21.02■□□□□ 0.96
PDPN-208ENST00000509009 KDM6BO15054 1643 aa21■□□□□ 0.95
PDPN-208ENST00000509009 ZCCHC11Q5TAX3 1644 aaKnown RBP20.99■□□□□ 0.95
PDPN-208ENST00000509009 FAM9AQ8IZU1 332 aaPredicted RBP20.98■□□□□ 0.95
PDPN-208ENST00000509009 EEA1Q15075 1411 aa20.97■□□□□ 0.95
PDPN-208ENST00000509009 ABCA8O94911 1581 aa20.97■□□□□ 0.95
PDPN-208ENST00000509009 KCNH8Q96L42 1107 aa20.96■□□□□ 0.95
PDPN-208ENST00000509009 WDR7Q9Y4E6 1490 aa20.94■□□□□ 0.94
PDPN-208ENST00000509009 PPRC1Q5VV67 1664 aaKnown RBP20.93■□□□□ 0.94
PDPN-208ENST00000509009 COL17A1Q9UMD9 1497 aaPredicted RBP20.9■□□□□ 0.94
PDPN-208ENST00000509009 KDM4FA0A1W2PPD8 638 aa20.9■□□□□ 0.94
PDPN-208ENST00000509009 ARID3CA6NKF2 412 aa20.89■□□□□ 0.93
PDPN-208ENST00000509009 MAP3K4Q9Y6R4 1608 aa20.89■□□□□ 0.93
PDPN-208ENST00000509009 RANGAP1P46060 587 aaPredicted RBP20.88■□□□□ 0.93
PDPN-208ENST00000509009 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
PDPN-208ENST00000509009 ATP10BO94823 1461 aa20.87■□□□□ 0.93
PDPN-208ENST00000509009 TEX14Q8IWB6 1497 aa20.87■□□□□ 0.93
PDPN-208ENST00000509009 CD109Q6YHK3 1445 aa20.86■□□□□ 0.93
PDPN-208ENST00000509009 SAMD9Q5K651 1589 aa20.82■□□□□ 0.92
PDPN-208ENST00000509009 MAGI3Q5TCQ9 1506 aa20.8■□□□□ 0.92
PDPN-208ENST00000509009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.77■□□□□ 0.92
PDPN-208ENST00000509009 HNRNPUL2Q1KMD3 747 aaKnown RBP20.77■□□□□ 0.92
PDPN-208ENST00000509009 FHOD3Q2V2M9 1422 aa20.76■□□□□ 0.91
PDPN-208ENST00000509009 EHMT2Q96KQ7 1210 aa20.74■□□□□ 0.91
PDPN-208ENST00000509009 CFAP43Q8NDM7 1665 aa20.73■□□□□ 0.91
PDPN-208ENST00000509009 UBTFP17480 764 aaKnown RBP20.73■□□□□ 0.91
PDPN-208ENST00000509009 KIF21BO75037 1637 aa20.73■□□□□ 0.91
PDPN-208ENST00000509009 RAPGEF6Q8TEU7 1601 aa20.72■□□□□ 0.91
PDPN-208ENST00000509009 NUP153P49790 1475 aaKnown RBP20.71■□□□□ 0.91
PDPN-208ENST00000509009 PLEKHD1A6NEE1 506 aa20.69■□□□□ 0.9
PDPN-208ENST00000509009 ADGRL1O94910 1474 aa20.65■□□□□ 0.9
PDPN-208ENST00000509009 PHLDB1Q86UU1 1377 aa20.65■□□□□ 0.9
PDPN-208ENST00000509009 EFCAB5A4FU69 1503 aa20.64■□□□□ 0.9
PDPN-208ENST00000509009 ARAP3Q8WWN8 1544 aa20.64■□□□□ 0.9
PDPN-208ENST00000509009 ABCA9Q8IUA7 1624 aa20.64■□□□□ 0.89
PDPN-208ENST00000509009 RAPGEF3O95398 923 aa20.6■□□□□ 0.89
PDPN-208ENST00000509009 NEO1Q92859 1461 aa20.56■□□□□ 0.88
PDPN-208ENST00000509009 ATP1B4Q9UN42 357 aaPredicted RBP20.56■□□□□ 0.88
PDPN-208ENST00000509009 ARHGAP35Q9NRY4 1499 aa20.55■□□□□ 0.88
PDPN-208ENST00000509009 FMN1Q68DA7 1419 aa20.53■□□□□ 0.88
PDPN-208ENST00000509009 CDK13Q14004 1512 aaKnown RBP20.49■□□□□ 0.87
PDPN-208ENST00000509009 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.48■□□□□ 0.87
PDPN-208ENST00000509009 AKNAQ7Z591 1439 aa20.47■□□□□ 0.87
PDPN-208ENST00000509009 CDK11AQ9UQ88 783 aaPredicted RBP20.47■□□□□ 0.87
PDPN-208ENST00000509009 FANCAO15360 1455 aa20.44■□□□□ 0.86
PDPN-208ENST00000509009 DENND4BO75064 1496 aaPredicted RBP20.43■□□□□ 0.86
PDPN-208ENST00000509009 PLCH2O75038 1416 aa20.42■□□□□ 0.86
PDPN-208ENST00000509009 FRMPD1Q5SYB0 1578 aa20.4■□□□□ 0.86
PDPN-208ENST00000509009 TTC37Q6PGP7 1564 aa20.4■□□□□ 0.86
PDPN-208ENST00000509009 ARID4BQ4LE39 1312 aaPredicted RBP20.39■□□□□ 0.85
PDPN-208ENST00000509009 EFCAB2Q5VUJ9 269 aa20.39■□□□□ 0.85
PDPN-208ENST00000509009 HECW1Q76N89 1606 aa20.38■□□□□ 0.85
PDPN-208ENST00000509009 TROQ12816 1431 aaPredicted RBP20.36■□□□□ 0.85
PDPN-208ENST00000509009 SCAPERQ9BY12 1400 aa20.36■□□□□ 0.85
PDPN-208ENST00000509009 CFAP74Q9C0B2 1584 aa20.34■□□□□ 0.85
PDPN-208ENST00000509009 CASKIN1Q8WXD9 1431 aa20.33■□□□□ 0.84
PDPN-208ENST00000509009 RICTORQ6R327 1708 aa20.32■□□□□ 0.84
PDPN-208ENST00000509009 ADAMTSL3P82987 1691 aa20.3■□□□□ 0.84
PDPN-208ENST00000509009 HECW2Q9P2P5 1572 aa20.29■□□□□ 0.84
PDPN-208ENST00000509009 CLIP1P30622 1438 aa20.29■□□□□ 0.84
PDPN-208ENST00000509009 YEATS2Q9ULM3 1422 aa20.29■□□□□ 0.84
PDPN-208ENST00000509009 PTPRMP28827 1452 aa20.29■□□□□ 0.84
PDPN-208ENST00000509009 MAGI2Q86UL8 1455 aa20.28■□□□□ 0.84
PDPN-208ENST00000509009 KIF14Q15058 1648 aa20.27■□□□□ 0.84
PDPN-208ENST00000509009 ZMYM4Q5VZL5 1548 aa20.27■□□□□ 0.83
PDPN-208ENST00000509009 ARHGEF40Q8TER5 1519 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms