RNA–Protein interactions for RNA: ENST00000508918.5

LDB2-211, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 1,498 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-211ENST00000508918 MAGI1Q96QZ7 1491 aaPredicted RBP21.35■■□□□ 1.01
LDB2-211ENST00000508918 GRIN2AQ12879 1464 aa21.27■■□□□ 1
LDB2-211ENST00000508918 EFCAB5A4FU69 1503 aa21.27■■□□□ 1
LDB2-211ENST00000508918 SYNJ2O15056 1496 aa21.27■□□□□ 0.99
LDB2-211ENST00000508918 PPARGC1BQ86YN6 1023 aaKnown RBP21.25■□□□□ 0.99
LDB2-211ENST00000508918 IQGAP2Q13576 1575 aa21.22■□□□□ 0.99
LDB2-211ENST00000508918 TRIM26Q12899 539 aaPredicted RBP21.22■□□□□ 0.99
LDB2-211ENST00000508918 PCGF6Q9BYE7 350 aa21.21■□□□□ 0.99
LDB2-211ENST00000508918 SAMD9Q5K651 1589 aa21.2■□□□□ 0.98
LDB2-211ENST00000508918 CHMP7Q8WUX9 453 aaPredicted RBP21.2■□□□□ 0.98
LDB2-211ENST00000508918 P3H3Q8IVL6 736 aa21.17■□□□□ 0.98
LDB2-211ENST00000508918 FHOD3Q2V2M9 1422 aa21.16■□□□□ 0.98
LDB2-211ENST00000508918 KIAA0586Q9BVV6 1533 aa21.16■□□□□ 0.98
LDB2-211ENST00000508918 CEP170Q5SW79 1584 aa21.15■□□□□ 0.98
LDB2-211ENST00000508918 FBLN2P98095 1184 aa21.15■□□□□ 0.98
LDB2-211ENST00000508918 APLP2Q06481 763 aa21.14■□□□□ 0.98
LDB2-211ENST00000508918 UGGT2Q9NYU1 1516 aa21.11■□□□□ 0.97
LDB2-211ENST00000508918 NUP160Q12769 1436 aa21.11■□□□□ 0.97
LDB2-211ENST00000508918 TTBK1Q5TCY1 1321 aaPredicted RBP21.1■□□□□ 0.97
LDB2-211ENST00000508918 CHD1O14646 1710 aa21.1■□□□□ 0.97
LDB2-211ENST00000508918 PCF11O94913 1555 aaKnown RBP21.09■□□□□ 0.97
LDB2-211ENST00000508918 FMN1Q68DA7 1419 aa21.05■□□□□ 0.96
LDB2-211ENST00000508918 FYCO1Q9BQS8 1478 aa21.03■□□□□ 0.96
LDB2-211ENST00000508918 CASKIN1Q8WXD9 1431 aa21.01■□□□□ 0.95
LDB2-211ENST00000508918 KIAA0556O60303 1618 aa21.01■□□□□ 0.95
LDB2-211ENST00000508918 DISP1Q96F81 1524 aa21■□□□□ 0.95
LDB2-211ENST00000508918 TIAM1Q13009 1591 aa21■□□□□ 0.95
LDB2-211ENST00000508918 MAP3K1Q13233 1512 aa20.99■□□□□ 0.95
LDB2-211ENST00000508918 CFAP43Q8NDM7 1665 aa20.98■□□□□ 0.95
LDB2-211ENST00000508918 KANK4Q5T7N3 995 aaPredicted RBP20.95■□□□□ 0.94
LDB2-211ENST00000508918 ATP1B4Q9UN42 357 aaPredicted RBP20.94■□□□□ 0.94
LDB2-211ENST00000508918 JPH4Q96JJ6 628 aa20.93■□□□□ 0.94
LDB2-211ENST00000508918 LRRIQ1Q96JM4 1722 aa20.91■□□□□ 0.94
LDB2-211ENST00000508918 CARMIL2Q6F5E8 1435 aa20.9■□□□□ 0.94
LDB2-211ENST00000508918 LRRC9Q6ZRR7 1453 aa20.88■□□□□ 0.93
LDB2-211ENST00000508918 HECW1Q76N89 1606 aa20.88■□□□□ 0.93
LDB2-211ENST00000508918 SHROOM2Q13796 1616 aa20.85■□□□□ 0.93
LDB2-211ENST00000508918 CLASP1Q7Z460 1538 aa20.82■□□□□ 0.92
LDB2-211ENST00000508918 PRG4Q92954 1404 aaPredicted RBP20.82■□□□□ 0.92
LDB2-211ENST00000508918 CCDC18Q5T9S5 1454 aa20.81■□□□□ 0.92
LDB2-211ENST00000508918 RAPGEF6Q8TEU7 1601 aa20.81■□□□□ 0.92
LDB2-211ENST00000508918 EPRSP07814 1512 aaKnown RBP20.78■□□□□ 0.92
LDB2-211ENST00000508918 CDK13Q14004 1512 aaKnown RBP20.74■□□□□ 0.91
LDB2-211ENST00000508918 NUP153P49790 1475 aaKnown RBP20.73■□□□□ 0.91
LDB2-211ENST00000508918 MTUS2Q5JR59 1369 aa20.73■□□□□ 0.91
LDB2-211ENST00000508918 PLB1Q6P1J6 1458 aa20.73■□□□□ 0.91
LDB2-211ENST00000508918 EHBP1L1Q8N3D4 1523 aa20.72■□□□□ 0.91
LDB2-211ENST00000508918 RRBP1Q9P2E9 1410 aaKnown RBP20.72■□□□□ 0.91
LDB2-211ENST00000508918 ABCA8O94911 1581 aa20.7■□□□□ 0.9
LDB2-211ENST00000508918 ERCC6L2Q5T890 1561 aa20.7■□□□□ 0.9
LDB2-211ENST00000508918 MAGI3Q5TCQ9 1506 aa20.7■□□□□ 0.9
LDB2-211ENST00000508918 PHLDB1Q86UU1 1377 aa20.69■□□□□ 0.9
LDB2-211ENST00000508918 PTPRGP23470 1445 aa20.68■□□□□ 0.9
LDB2-211ENST00000508918 ARID3CA6NKF2 412 aa20.68■□□□□ 0.9
LDB2-211ENST00000508918 SUPT6HQ7KZ85 1726 aaKnown RBP20.68■□□□□ 0.9
LDB2-211ENST00000508918 CCNB3Q8WWL7 1395 aa20.65■□□□□ 0.9
LDB2-211ENST00000508918 NCOA2Q15596 1464 aa20.63■□□□□ 0.89
LDB2-211ENST00000508918 HNRNPUL2Q1KMD3 747 aaKnown RBP20.62■□□□□ 0.89
LDB2-211ENST00000508918 ARHGEF11O15085 1522 aa20.6■□□□□ 0.89
LDB2-211ENST00000508918 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.59■□□□□ 0.89
LDB2-211ENST00000508918 OSCARQ8IYS5 282 aa20.58■□□□□ 0.89
LDB2-211ENST00000508918 HRCP23327 699 aa20.57■□□□□ 0.88
LDB2-211ENST00000508918 CDK11AQ9UQ88 783 aaPredicted RBP20.57■□□□□ 0.88
LDB2-211ENST00000508918 UACAQ9BZF9 1416 aa20.57■□□□□ 0.88
LDB2-211ENST00000508918 MYOM3Q5VTT5 1437 aa20.55■□□□□ 0.88
LDB2-211ENST00000508918 ATP10BO94823 1461 aa20.55■□□□□ 0.88
LDB2-211ENST00000508918 FGD6Q6ZV73 1430 aa20.54■□□□□ 0.88
LDB2-211ENST00000508918 TROQ12816 1431 aaPredicted RBP20.53■□□□□ 0.88
LDB2-211ENST00000508918 ABCC2Q92887 1545 aa20.52■□□□□ 0.88
LDB2-211ENST00000508918 FAM50AQ14320 339 aaKnown RBP20.5■□□□□ 0.87
LDB2-211ENST00000508918 ADCY10Q96PN6 1610 aa20.5■□□□□ 0.87
LDB2-211ENST00000508918 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.49■□□□□ 0.87
LDB2-211ENST00000508918 KIF14Q15058 1648 aa20.46■□□□□ 0.87
LDB2-211ENST00000508918 PTPN23Q9H3S7 1636 aa20.46■□□□□ 0.87
LDB2-211ENST00000508918 ITGAEP38570 1179 aa20.46■□□□□ 0.87
LDB2-211ENST00000508918 UHRF1BP1LA0JNW5 1464 aa20.46■□□□□ 0.87
LDB2-211ENST00000508918 PLEKHD1A6NEE1 506 aa20.45■□□□□ 0.86
LDB2-211ENST00000508918 MIA2Q96PC5 1412 aa20.42■□□□□ 0.86
LDB2-211ENST00000508918 TCOF1Q13428 1488 aaKnown RBP20.41■□□□□ 0.86
LDB2-211ENST00000508918 ZCCHC11Q5TAX3 1644 aaKnown RBP20.41■□□□□ 0.86
LDB2-211ENST00000508918 ITSN2Q9NZM3 1697 aa20.4■□□□□ 0.86
LDB2-211ENST00000508918 CCER1Q8TC90 406 aaPredicted RBP20.39■□□□□ 0.85
LDB2-211ENST00000508918 KDM5BQ9UGL1 1544 aa20.37■□□□□ 0.85
LDB2-211ENST00000508918 ABCC10Q5T3U5 1492 aa20.35■□□□□ 0.85
LDB2-211ENST00000508918 GPATCH8Q9UKJ3 1502 aaKnown RBP20.34■□□□□ 0.85
LDB2-211ENST00000508918 CDC42BPAQ5VT25 1732 aa20.34■□□□□ 0.85
LDB2-211ENST00000508918 ZEB1P37275 1124 aaPredicted RBP20.34■□□□□ 0.85
LDB2-211ENST00000508918 PTPRKQ15262 1439 aa20.3■□□□□ 0.84
LDB2-211ENST00000508918 CFDP1Q9UEE9 299 aaPredicted RBP20.29■□□□□ 0.84
LDB2-211ENST00000508918 SETD5Q9C0A6 1442 aa20.29■□□□□ 0.84
LDB2-211ENST00000508918 CAMSAP2Q08AD1 1489 aa20.27■□□□□ 0.84
LDB2-211ENST00000508918 RAB3GAP2Q9H2M9 1393 aa20.26■□□□□ 0.83
LDB2-211ENST00000508918 ZNF644Q9H582 1327 aaPredicted RBP20.26■□□□□ 0.83
LDB2-211ENST00000508918 DNMT1P26358 1616 aaKnown RBP20.26■□□□□ 0.83
LDB2-211ENST00000508918 TTC37Q6PGP7 1564 aa20.26■□□□□ 0.83
LDB2-211ENST00000508918 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.26■□□□□ 0.83
LDB2-211ENST00000508918 PREX2Q70Z35 1606 aa20.25■□□□□ 0.83
LDB2-211ENST00000508918 CDC42BPBQ9Y5S2 1711 aa20.23■□□□□ 0.83
LDB2-211ENST00000508918 DAPK1P53355 1430 aa20.22■□□□□ 0.83
LDB2-211ENST00000508918 MYO5CQ9NQX4 1742 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms