RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 PRG4Q92954 1404 aaPredicted RBP23.55■■□□□ 1.36
CCHCR1-227ENST00000508852 RUSC2Q8N2Y8 1516 aa23.54■■□□□ 1.36
CCHCR1-227ENST00000508852 KIAA0586Q9BVV6 1533 aa23.49■■□□□ 1.35
CCHCR1-227ENST00000508852 CARMIL1Q5VZK9 1371 aa23.42■■□□□ 1.34
CCHCR1-227ENST00000508852 NPM1P06748 294 aaKnown RBP eCLIP23.38■■□□□ 1.33
CCHCR1-227ENST00000508852 CARMIL2Q6F5E8 1435 aa23.32■■□□□ 1.32
CCHCR1-227ENST00000508852 MAPKBP1O60336 1514 aa23.28■■□□□ 1.32
CCHCR1-227ENST00000508852 IQGAP2Q13576 1575 aa23.27■■□□□ 1.32
CCHCR1-227ENST00000508852 KIF13AQ9H1H9 1805 aa23.26■■□□□ 1.31
CCHCR1-227ENST00000508852 RAPGEF2Q9Y4G8 1499 aa23.25■■□□□ 1.31
CCHCR1-227ENST00000508852 ADCY10Q96PN6 1610 aa23.25■■□□□ 1.31
CCHCR1-227ENST00000508852 PTPRGP23470 1445 aa23.24■■□□□ 1.31
CCHCR1-227ENST00000508852 TNIKQ9UKE5 1360 aa23.22■■□□□ 1.31
CCHCR1-227ENST00000508852 ABCC10Q5T3U5 1492 aa23.21■■□□□ 1.31
CCHCR1-227ENST00000508852 FAM69CQ0P6D2 419 aa23.16■■□□□ 1.3
CCHCR1-227ENST00000508852 UGGT2Q9NYU1 1516 aa23.13■■□□□ 1.29
CCHCR1-227ENST00000508852 DIP2BQ9P265 1576 aa23.13■■□□□ 1.29
CCHCR1-227ENST00000508852 ABCC2Q92887 1545 aa23.1■■□□□ 1.29
CCHCR1-227ENST00000508852 UHRF1BP1LA0JNW5 1464 aa23.1■■□□□ 1.29
CCHCR1-227ENST00000508852 DISP1Q96F81 1524 aa23.09■■□□□ 1.29
CCHCR1-227ENST00000508852 CTTNBP2Q8WZ74 1663 aa23.08■■□□□ 1.29
CCHCR1-227ENST00000508852 UACAQ9BZF9 1416 aa23.07■■□□□ 1.28
CCHCR1-227ENST00000508852 TTBK1Q5TCY1 1321 aaPredicted RBP23.05■■□□□ 1.28
CCHCR1-227ENST00000508852 PLB1Q6P1J6 1458 aa23.05■■□□□ 1.28
CCHCR1-227ENST00000508852 GOLGA3Q08378 1498 aa23.04■■□□□ 1.28
CCHCR1-227ENST00000508852 AEBP2Q6ZN18 517 aaPredicted RBP23.03■■□□□ 1.28
CCHCR1-227ENST00000508852 KIAA0556O60303 1618 aa23.03■■□□□ 1.28
CCHCR1-227ENST00000508852 PRXQ9BXM0 1461 aa23.01■■□□□ 1.27
CCHCR1-227ENST00000508852 FAM9AQ8IZU1 332 aaPredicted RBP22.98■■□□□ 1.27
CCHCR1-227ENST00000508852 ASXL2Q76L83 1435 aa22.97■■□□□ 1.27
CCHCR1-227ENST00000508852 GLI2P10070 1586 aa22.97■■□□□ 1.27
CCHCR1-227ENST00000508852 KDM5BQ9UGL1 1544 aa22.96■■□□□ 1.27
CCHCR1-227ENST00000508852 TSPOAP1O95153 1857 aa22.95■■□□□ 1.26
CCHCR1-227ENST00000508852 KDM6BO15054 1643 aa22.93■■□□□ 1.26
CCHCR1-227ENST00000508852 EEA1Q15075 1411 aa22.91■■□□□ 1.26
CCHCR1-227ENST00000508852 ZCCHC11Q5TAX3 1644 aaKnown RBP22.9■■□□□ 1.26
CCHCR1-227ENST00000508852 CSRNP3Q8WYN3 585 aa22.88■■□□□ 1.25
CCHCR1-227ENST00000508852 EPRSP07814 1512 aaKnown RBP22.84■■□□□ 1.25
CCHCR1-227ENST00000508852 TEX14Q8IWB6 1497 aa22.82■■□□□ 1.24
CCHCR1-227ENST00000508852 ABCA8O94911 1581 aa22.81■■□□□ 1.24
CCHCR1-227ENST00000508852 MAP3K4Q9Y6R4 1608 aa22.8■■□□□ 1.24
CCHCR1-227ENST00000508852 WDR7Q9Y4E6 1490 aa22.79■■□□□ 1.24
CCHCR1-227ENST00000508852 PPRC1Q5VV67 1664 aaKnown RBP22.78■■□□□ 1.24
CCHCR1-227ENST00000508852 SAMD9Q5K651 1589 aa22.72■■□□□ 1.23
CCHCR1-227ENST00000508852 CFAP43Q8NDM7 1665 aa22.71■■□□□ 1.23
CCHCR1-227ENST00000508852 MAGI3Q5TCQ9 1506 aa22.66■■□□□ 1.22
CCHCR1-227ENST00000508852 CD109Q6YHK3 1445 aa22.65■■□□□ 1.22
CCHCR1-227ENST00000508852 KIF21BO75037 1637 aa22.64■■□□□ 1.22
CCHCR1-227ENST00000508852 P3H3Q8IVL6 736 aa22.64■■□□□ 1.21
CCHCR1-227ENST00000508852 KCNH8Q96L42 1107 aa22.63■■□□□ 1.21
CCHCR1-227ENST00000508852 RAPGEF6Q8TEU7 1601 aa22.62■■□□□ 1.21
CCHCR1-227ENST00000508852 ATP10BO94823 1461 aa22.6■■□□□ 1.21
CCHCR1-227ENST00000508852 EFCAB5A4FU69 1503 aa22.58■■□□□ 1.21
CCHCR1-227ENST00000508852 COL17A1Q9UMD9 1497 aaPredicted RBP22.56■■□□□ 1.2
CCHCR1-227ENST00000508852 PHLDB1Q86UU1 1377 aa22.55■■□□□ 1.2
CCHCR1-227ENST00000508852 KDM4FA0A1W2PPD8 638 aa22.54■■□□□ 1.2
CCHCR1-227ENST00000508852 ABCA9Q8IUA7 1624 aa22.52■■□□□ 1.2
CCHCR1-227ENST00000508852 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.51■■□□□ 1.19
CCHCR1-227ENST00000508852 HNRNPUL2Q1KMD3 747 aaKnown RBP22.51■■□□□ 1.19
CCHCR1-227ENST00000508852 FHOD3Q2V2M9 1422 aa22.49■■□□□ 1.19
CCHCR1-227ENST00000508852 ARID3CA6NKF2 412 aa22.48■■□□□ 1.19
CCHCR1-227ENST00000508852 RANGAP1P46060 587 aaPredicted RBP22.48■■□□□ 1.19
CCHCR1-227ENST00000508852 CHIC1Q5VXU3 224 aa22.48■■□□□ 1.19
CCHCR1-227ENST00000508852 NUP153P49790 1475 aaKnown RBP22.47■■□□□ 1.19
CCHCR1-227ENST00000508852 ARAP3Q8WWN8 1544 aa22.47■■□□□ 1.19
CCHCR1-227ENST00000508852 PLEKHD1A6NEE1 506 aa22.45■■□□□ 1.18
CCHCR1-227ENST00000508852 UBTFP17480 764 aaKnown RBP22.45■■□□□ 1.18
CCHCR1-227ENST00000508852 ADGRL1O94910 1474 aa22.45■■□□□ 1.18
CCHCR1-227ENST00000508852 NEO1Q92859 1461 aa22.43■■□□□ 1.18
CCHCR1-227ENST00000508852 FMN1Q68DA7 1419 aa22.39■■□□□ 1.17
CCHCR1-227ENST00000508852 CFAP74Q9C0B2 1584 aa22.35■■□□□ 1.17
CCHCR1-227ENST00000508852 HECW1Q76N89 1606 aa22.31■■□□□ 1.16
CCHCR1-227ENST00000508852 CDK11AQ9UQ88 783 aaPredicted RBP22.31■■□□□ 1.16
CCHCR1-227ENST00000508852 ARHGAP35Q9NRY4 1499 aa22.28■■□□□ 1.16
CCHCR1-227ENST00000508852 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.27■■□□□ 1.161e-5■■■■□ 25.8
CCHCR1-227ENST00000508852 FANCAO15360 1455 aa22.25■■□□□ 1.15
CCHCR1-227ENST00000508852 RAPGEF3O95398 923 aa22.24■■□□□ 1.15
CCHCR1-227ENST00000508852 EHMT2Q96KQ7 1210 aa22.24■■□□□ 1.15
CCHCR1-227ENST00000508852 AKNAQ7Z591 1439 aa22.23■■□□□ 1.15
CCHCR1-227ENST00000508852 DENND4BO75064 1496 aaPredicted RBP22.23■■□□□ 1.15
CCHCR1-227ENST00000508852 CDK13Q14004 1512 aaKnown RBP22.23■■□□□ 1.15
CCHCR1-227ENST00000508852 ATP1B4Q9UN42 357 aaPredicted RBP22.23■■□□□ 1.15
CCHCR1-227ENST00000508852 TTC37Q6PGP7 1564 aa22.21■■□□□ 1.15
CCHCR1-227ENST00000508852 FRMPD1Q5SYB0 1578 aa22.2■■□□□ 1.14
CCHCR1-227ENST00000508852 RICTORQ6R327 1708 aa22.19■■□□□ 1.14
CCHCR1-227ENST00000508852 PLCH2O75038 1416 aa22.18■■□□□ 1.14
CCHCR1-227ENST00000508852 CLIP1P30622 1438 aa22.17■■□□□ 1.14
CCHCR1-227ENST00000508852 MYO5CQ9NQX4 1742 aa22.16■■□□□ 1.14
CCHCR1-227ENST00000508852 MAGI2Q86UL8 1455 aa22.15■■□□□ 1.14
CCHCR1-227ENST00000508852 KIF14Q15058 1648 aa22.15■■□□□ 1.14
CCHCR1-227ENST00000508852 ARHGEF40Q8TER5 1519 aa22.14■■□□□ 1.13
CCHCR1-227ENST00000508852 TROQ12816 1431 aaPredicted RBP22.14■■□□□ 1.13
CCHCR1-227ENST00000508852 ZMYM4Q5VZL5 1548 aa22.13■■□□□ 1.13
CCHCR1-227ENST00000508852 EFCAB2Q5VUJ9 269 aa22.13■■□□□ 1.13
CCHCR1-227ENST00000508852 CCDC18Q5T9S5 1454 aa22.13■■□□□ 1.13
CCHCR1-227ENST00000508852 ADAMTSL3P82987 1691 aa22.12■■□□□ 1.13
CCHCR1-227ENST00000508852 ARID4BQ4LE39 1312 aaPredicted RBP22.11■■□□□ 1.13
CCHCR1-227ENST00000508852 CASKIN1Q8WXD9 1431 aa22.11■■□□□ 1.13
CCHCR1-227ENST00000508852 BCORL1Q5H9F3 1711 aa22.11■■□□□ 1.13
CCHCR1-227ENST00000508852 HECW2Q9P2P5 1572 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms