RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 RANGAP1P46060 587 aaPredicted RBP17.67■□□□□ 0.42
PRPF40B-203ENST00000508736 APLP2Q06481 763 aa17.67■□□□□ 0.42
PRPF40B-203ENST00000508736 SNAPC4Q5SXM2 1469 aa17.66■□□□□ 0.42
PRPF40B-203ENST00000508736 FBLN2P98095 1184 aa17.66■□□□□ 0.42
PRPF40B-203ENST00000508736 CTTNBP2Q8WZ74 1663 aa17.65■□□□□ 0.42
PRPF40B-203ENST00000508736 EFCAB5A4FU69 1503 aa17.64■□□□□ 0.41
PRPF40B-203ENST00000508736 CHMP7Q8WUX9 453 aaPredicted RBP17.62■□□□□ 0.41
PRPF40B-203ENST00000508736 MAGI1Q96QZ7 1491 aaPredicted RBP17.62■□□□□ 0.41
PRPF40B-203ENST00000508736 FHAD1B1AJZ9 1412 aa17.6■□□□□ 0.41
PRPF40B-203ENST00000508736 MAP3K1Q13233 1512 aa17.58■□□□□ 0.41
PRPF40B-203ENST00000508736 ADAMTS12P58397 1594 aa17.57■□□□□ 0.4
PRPF40B-203ENST00000508736 SYNJ2O15056 1496 aa17.56■□□□□ 0.4
PRPF40B-203ENST00000508736 CCER1Q8TC90 406 aaPredicted RBP17.55■□□□□ 0.4
PRPF40B-203ENST00000508736 TTBK1Q5TCY1 1321 aaPredicted RBP17.54■□□□□ 0.4
PRPF40B-203ENST00000508736 SAMD9Q5K651 1589 aa17.51■□□□□ 0.39
PRPF40B-203ENST00000508736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.51■□□□□ 0.39
PRPF40B-203ENST00000508736 GRIN2AQ12879 1464 aa17.5■□□□□ 0.39
PRPF40B-203ENST00000508736 TIAM1Q13009 1591 aa17.48■□□□□ 0.39
PRPF40B-203ENST00000508736 CHD1O14646 1710 aa17.48■□□□□ 0.39
PRPF40B-203ENST00000508736 FYCO1Q9BQS8 1478 aa17.47■□□□□ 0.39
PRPF40B-203ENST00000508736 FMN1Q68DA7 1419 aa17.47■□□□□ 0.39
PRPF40B-203ENST00000508736 FHOD3Q2V2M9 1422 aa17.46■□□□□ 0.38
PRPF40B-203ENST00000508736 CASKIN1Q8WXD9 1431 aa17.46■□□□□ 0.38
PRPF40B-203ENST00000508736 PCF11O94913 1555 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-203ENST00000508736 KANK4Q5T7N3 995 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-203ENST00000508736 OSCARQ8IYS5 282 aa17.45■□□□□ 0.38
PRPF40B-203ENST00000508736 CFAP43Q8NDM7 1665 aa17.43■□□□□ 0.38
PRPF40B-203ENST00000508736 IQGAP2Q13576 1575 aa17.42■□□□□ 0.38
PRPF40B-203ENST00000508736 RRBP1Q9P2E9 1410 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-203ENST00000508736 LRRC9Q6ZRR7 1453 aa17.4■□□□□ 0.38
PRPF40B-203ENST00000508736 NUP160Q12769 1436 aa17.39■□□□□ 0.37
PRPF40B-203ENST00000508736 CEP170Q5SW79 1584 aa17.38■□□□□ 0.37
PRPF40B-203ENST00000508736 P3H3Q8IVL6 736 aa17.38■□□□□ 0.37
PRPF40B-203ENST00000508736 KIAA0586Q9BVV6 1533 aa17.37■□□□□ 0.37
PRPF40B-203ENST00000508736 UGGT2Q9NYU1 1516 aa17.37■□□□□ 0.37
PRPF40B-203ENST00000508736 JPH4Q96JJ6 628 aa17.32■□□□□ 0.36
PRPF40B-203ENST00000508736 CCNB3Q8WWL7 1395 aa17.3■□□□□ 0.36
PRPF40B-203ENST00000508736 CLASP1Q7Z460 1538 aa17.28■□□□□ 0.36
PRPF40B-203ENST00000508736 HNRNPUL2Q1KMD3 747 aaKnown RBP17.27■□□□□ 0.36
PRPF40B-203ENST00000508736 CCDC18Q5T9S5 1454 aa17.25■□□□□ 0.35
PRPF40B-203ENST00000508736 KIAA0556O60303 1618 aa17.24■□□□□ 0.35
PRPF40B-203ENST00000508736 HECW1Q76N89 1606 aa17.24■□□□□ 0.35
PRPF40B-203ENST00000508736 DISP1Q96F81 1524 aa17.24■□□□□ 0.35
PRPF40B-203ENST00000508736 ATP1B4Q9UN42 357 aaPredicted RBP17.23■□□□□ 0.35
PRPF40B-203ENST00000508736 LRRIQ1Q96JM4 1722 aa17.23■□□□□ 0.35
PRPF40B-203ENST00000508736 PHLDB1Q86UU1 1377 aa17.23■□□□□ 0.35
PRPF40B-203ENST00000508736 PRG4Q92954 1404 aaPredicted RBP17.21■□□□□ 0.35
PRPF40B-203ENST00000508736 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.21■□□□□ 0.35
PRPF40B-203ENST00000508736 EHBP1L1Q8N3D4 1523 aa17.2■□□□□ 0.34
PRPF40B-203ENST00000508736 MTUS2Q5JR59 1369 aa17.18■□□□□ 0.34
PRPF40B-203ENST00000508736 SHROOM2Q13796 1616 aa17.17■□□□□ 0.34
PRPF40B-203ENST00000508736 EPRSP07814 1512 aaKnown RBP17.16■□□□□ 0.34
PRPF40B-203ENST00000508736 CARMIL2Q6F5E8 1435 aa17.16■□□□□ 0.34
PRPF40B-203ENST00000508736 SUPT6HQ7KZ85 1726 aaKnown RBP17.14■□□□□ 0.34
PRPF40B-203ENST00000508736 ERCC6L2Q5T890 1561 aa17.14■□□□□ 0.33
PRPF40B-203ENST00000508736 ARHGEF11O15085 1522 aa17.14■□□□□ 0.33
PRPF40B-203ENST00000508736 CLSPNQ9HAW4 1339 aa17.12■□□□□ 0.33
PRPF40B-203ENST00000508736 NCOA2Q15596 1464 aa17.12■□□□□ 0.33
PRPF40B-203ENST00000508736 FGD6Q6ZV73 1430 aa17.11■□□□□ 0.33
PRPF40B-203ENST00000508736 RAPGEF6Q8TEU7 1601 aa17.11■□□□□ 0.33
PRPF40B-203ENST00000508736 DNAJC5Q9H3Z4 198 aa17.1■□□□□ 0.33
PRPF40B-203ENST00000508736 MAGI3Q5TCQ9 1506 aa17.1■□□□□ 0.33
PRPF40B-203ENST00000508736 DIEXFQ68CQ4 756 aaKnown RBP17.1■□□□□ 0.33
PRPF40B-203ENST00000508736 MYOM3Q5VTT5 1437 aa17.08■□□□□ 0.33
PRPF40B-203ENST00000508736 NUP153P49790 1475 aaKnown RBP17.07■□□□□ 0.32
PRPF40B-203ENST00000508736 PTPRGP23470 1445 aa17.07■□□□□ 0.32
PRPF40B-203ENST00000508736 ZNF316A6NFI3 1004 aaPredicted RBP17.06■□□□□ 0.32
PRPF40B-203ENST00000508736 DHX57Q6P158 1386 aaKnown RBP17.06■□□□□ 0.32
PRPF40B-203ENST00000508736 CDK13Q14004 1512 aaKnown RBP17.05■□□□□ 0.32
PRPF40B-203ENST00000508736 RIMBP3CA6NJZ7 1639 aa17.04■□□□□ 0.32
PRPF40B-203ENST00000508736 RIMBP3BA6NNM3 1639 aa17.04■□□□□ 0.32
PRPF40B-203ENST00000508736 RIMBP3Q9UFD9 1639 aa17.04■□□□□ 0.32
PRPF40B-203ENST00000508736 FAM50AQ14320 339 aaKnown RBP17.03■□□□□ 0.32
PRPF40B-203ENST00000508736 CYB5RLQ6IPT4 315 aa17.03■□□□□ 0.32
PRPF40B-203ENST00000508736 SETD5Q9C0A6 1442 aa17.02■□□□□ 0.32
PRPF40B-203ENST00000508736 TCOF1Q13428 1488 aaKnown RBP17.01■□□□□ 0.31
PRPF40B-203ENST00000508736 MIA2Q96PC5 1412 aa17.01■□□□□ 0.31
PRPF40B-203ENST00000508736 ITGAEP38570 1179 aa17■□□□□ 0.31
PRPF40B-203ENST00000508736 RAB3GAP2Q9H2M9 1393 aa16.99■□□□□ 0.31
PRPF40B-203ENST00000508736 CDK11AQ9UQ88 783 aaPredicted RBP16.99■□□□□ 0.31
PRPF40B-203ENST00000508736 ABCA8O94911 1581 aa16.99■□□□□ 0.31
PRPF40B-203ENST00000508736 PTPN23Q9H3S7 1636 aa16.98■□□□□ 0.31
PRPF40B-203ENST00000508736 PLB1Q6P1J6 1458 aa16.98■□□□□ 0.31
PRPF40B-203ENST00000508736 ARID3CA6NKF2 412 aa16.94■□□□□ 0.3
PRPF40B-203ENST00000508736 TROQ12816 1431 aaPredicted RBP16.94■□□□□ 0.3
PRPF40B-203ENST00000508736 UACAQ9BZF9 1416 aa16.93■□□□□ 0.3
PRPF40B-203ENST00000508736 ADCY10Q96PN6 1610 aa16.92■□□□□ 0.3
PRPF40B-203ENST00000508736 HFM1A2PYH4 1435 aa16.92■□□□□ 0.3
PRPF40B-203ENST00000508736 PTPRKQ15262 1439 aa16.9■□□□□ 0.3
PRPF40B-203ENST00000508736 AKNAQ7Z591 1439 aa16.89■□□□□ 0.29
PRPF40B-203ENST00000508736 CENPBP07199 599 aaPredicted RBP16.88■□□□□ 0.29
PRPF40B-203ENST00000508736 ATP10BO94823 1461 aa16.87■□□□□ 0.29
PRPF40B-203ENST00000508736 NPM1P06748 294 aaKnown RBP eCLIP16.86■□□□□ 0.29
PRPF40B-203ENST00000508736 MAPKBP1O60336 1514 aa16.86■□□□□ 0.29
PRPF40B-203ENST00000508736 ABCC2Q92887 1545 aa16.86■□□□□ 0.29
PRPF40B-203ENST00000508736 ITSN2Q9NZM3 1697 aa16.85■□□□□ 0.29
PRPF40B-203ENST00000508736 UHRF1BP1LA0JNW5 1464 aa16.85■□□□□ 0.29
PRPF40B-203ENST00000508736 NAIPQ13075 1403 aa16.85■□□□□ 0.29
PRPF40B-203ENST00000508736 ACIN1Q9UKV3 1341 aaKnown RBP16.82■□□□□ 0.28
PRPF40B-203ENST00000508736 GCC2Q8IWJ2 1684 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms